RNA–Protein interactions for RNA: ENST00000638685.1

PAX6-236, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-236ENST00000638685 MON2Q7Z3U7 1717 aa13.54□□□□□ -0.24
PAX6-236ENST00000638685 CDC42BPGQ6DT37 1551 aa13.54□□□□□ -0.24
PAX6-236ENST00000638685 COL3A1P02461 1466 aaPredicted RBP13.54□□□□□ -0.24
PAX6-236ENST00000638685 DUSP27Q5VZP5 1158 aa13.54□□□□□ -0.24
PAX6-236ENST00000638685 RRP7AQ9Y3A4 280 aaKnown RBP13.53□□□□□ -0.24
PAX6-236ENST00000638685 NKTRP30414 1462 aaKnown RBP13.53□□□□□ -0.24
PAX6-236ENST00000638685 XRN1Q8IZH2 1706 aaKnown RBP13.53□□□□□ -0.24
PAX6-236ENST00000638685 ZNF142P52746 1687 aaPredicted RBP13.53□□□□□ -0.24
PAX6-236ENST00000638685 KCNA6P17658 529 aa13.52□□□□□ -0.24
PAX6-236ENST00000638685 ITSN1Q15811 1721 aa13.52□□□□□ -0.24
PAX6-236ENST00000638685 TOPAZ1Q8N9V7 1692 aa13.52□□□□□ -0.24
PAX6-236ENST00000638685 EDC4Q6P2E9 1401 aaKnown RBP13.52□□□□□ -0.25
PAX6-236ENST00000638685 NEUROD2Q15784 382 aa13.51□□□□□ -0.25
PAX6-236ENST00000638685 PTCH1Q13635 1447 aa13.51□□□□□ -0.25
PAX6-236ENST00000638685 DIP2AQ14689 1571 aa13.51□□□□□ -0.25
PAX6-236ENST00000638685 RBM33Q96EV2 1170 aaKnown RBP13.51□□□□□ -0.25
PAX6-236ENST00000638685 IQSEC2Q5JU85 1478 aa13.5□□□□□ -0.25
PAX6-236ENST00000638685 PLIN1O60240 522 aa13.5□□□□□ -0.25
PAX6-236ENST00000638685 GOLGA2Q08379 1002 aa13.5□□□□□ -0.25
PAX6-236ENST00000638685 SLFN5Q08AF3 891 aa13.5□□□□□ -0.25
PAX6-236ENST00000638685 NGEFQ8N5V2 710 aa13.5□□□□□ -0.25
PAX6-236ENST00000638685 CFAP53Q96M91 514 aa13.5□□□□□ -0.25
PAX6-236ENST00000638685 U2AF1L5P0DN76 240 aaPredicted RBP13.5□□□□□ -0.25
PAX6-236ENST00000638685 U2AF1Q01081 240 aaKnown RBP eCLIP13.5□□□□□ -0.25
PAX6-236ENST00000638685 TCP11L2Q8N4U5 519 aa13.5□□□□□ -0.25
PAX6-236ENST00000638685 EXOC6Q8TAG9 804 aa13.5□□□□□ -0.25
PAX6-236ENST00000638685 POLKQ9UBT6 870 aa13.5□□□□□ -0.25
PAX6-236ENST00000638685 ACEP12821 1306 aa13.49□□□□□ -0.25
PAX6-236ENST00000638685 MSH5O43196 834 aa13.49□□□□□ -0.25
PAX6-236ENST00000638685 ERICH6Q7L0X2 663 aa13.49□□□□□ -0.25
PAX6-236ENST00000638685 EMILIN1Q9Y6C2 1016 aa13.49□□□□□ -0.25
PAX6-236ENST00000638685 WWC1Q8IX03 1113 aa13.49□□□□□ -0.25
PAX6-236ENST00000638685 TRMT2AQ8IZ69 625 aaKnown RBP13.49□□□□□ -0.25
PAX6-236ENST00000638685 RUNDC1Q96C34 613 aa13.49□□□□□ -0.25
PAX6-236ENST00000638685 PNPLA6Q8IY17 1366 aa13.49□□□□□ -0.25
PAX6-236ENST00000638685 NRKQ7Z2Y5 1582 aa13.48□□□□□ -0.25
PAX6-236ENST00000638685 PPM1GO15355 546 aaPredicted RBP13.48□□□□□ -0.25
PAX6-236ENST00000638685 PMFBP1Q8TBY8 1022 aa13.48□□□□□ -0.25
PAX6-236ENST00000638685 CHD2O14647 1828 aaKnown RBP13.48□□□□□ -0.25
PAX6-236ENST00000638685 U2SURPO15042 1029 aaKnown RBP13.47□□□□□ -0.25
PAX6-236ENST00000638685 ANKLE2Q86XL3 938 aa13.47□□□□□ -0.25
PAX6-236ENST00000638685 PLEKHG3A1L390 1219 aa13.46□□□□□ -0.25
PAX6-236ENST00000638685 TCERG1O14776 1098 aaKnown RBP13.46□□□□□ -0.25
PAX6-236ENST00000638685 RRS1Q15050 365 aaKnown RBP13.46□□□□□ -0.25
PAX6-236ENST00000638685 PLEKHF1Q96S99 279 aa13.46□□□□□ -0.25
PAX6-236ENST00000638685 PHF23Q9BUL5 403 aaPredicted RBP13.45□□□□□ -0.26
PAX6-236ENST00000638685 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.45□□□□□ -0.26
PAX6-236ENST00000638685 TTC21BQ7Z4L5 1316 aa13.45□□□□□ -0.26
PAX6-236ENST00000638685 USP6P35125 1406 aa13.44□□□□□ -0.26
PAX6-236ENST00000638685 ZNF692Q9BU19 519 aaPredicted RBP13.44□□□□□ -0.26
PAX6-236ENST00000638685 NALCNQ8IZF0 1738 aa13.44□□□□□ -0.26
PAX6-236ENST00000638685 DIAPH1O60610 1272 aaKnown RBP13.44□□□□□ -0.26
PAX6-236ENST00000638685 C20orf194Q5TEA3 1177 aa13.44□□□□□ -0.26
PAX6-236ENST00000638685 COG3Q96JB2 828 aa13.43□□□□□ -0.26
PAX6-236ENST00000638685 SSH2Q76I76 1423 aa13.43□□□□□ -0.26
PAX6-236ENST00000638685 PIK3R4Q99570 1358 aa13.43□□□□□ -0.26
PAX6-236ENST00000638685 MS4A1P11836 297 aa13.42□□□□□ -0.26
PAX6-236ENST00000638685 E9PSI1 815 aa13.42□□□□□ -0.26
PAX6-236ENST00000638685 ANP32AP39687 249 aaKnown RBP13.42□□□□□ -0.26
PAX6-236ENST00000638685 FMN2Q9NZ56 1722 aa13.41□□□□□ -0.26
PAX6-236ENST00000638685 OVOS2A0A0J9YW53 1432 aa13.41□□□□□ -0.26
PAX6-236ENST00000638685 OVOS2Q6IE36 1432 aa13.41□□□□□ -0.26
PAX6-236ENST00000638685 LRRC7Q96NW7 1537 aa13.41□□□□□ -0.26
PAX6-236ENST00000638685 AATKQ6ZMQ8 1374 aa13.41□□□□□ -0.26
PAX6-236ENST00000638685 BCAR3O75815 825 aa13.4□□□□□ -0.26
PAX6-236ENST00000638685 HMOX1P09601 288 aa13.4□□□□□ -0.26
PAX6-236ENST00000638685 CRBNQ96SW2 442 aa13.4□□□□□ -0.26
PAX6-236ENST00000638685 NPHP4O75161 1426 aaPredicted RBP13.4□□□□□ -0.26
PAX6-236ENST00000638685 SOX12O15370 315 aa13.39□□□□□ -0.27
PAX6-236ENST00000638685 IL13P35225 146 aa13.39□□□□□ -0.27
PAX6-236ENST00000638685 TMPOP42166 694 aaKnown RBP13.39□□□□□ -0.27
PAX6-236ENST00000638685 TRIM35Q9UPQ4 493 aa13.39□□□□□ -0.27
PAX6-236ENST00000638685 RSPH6AQ9H0K4 717 aa13.39□□□□□ -0.27
PAX6-236ENST00000638685 PEAK1Q9H792 1746 aa13.39□□□□□ -0.27
PAX6-236ENST00000638685 NGDNQ8NEJ9 315 aaKnown RBP13.38□□□□□ -0.27
PAX6-236ENST00000638685 PHACTR3Q96KR7 559 aa13.38□□□□□ -0.27
PAX6-236ENST00000638685 CDK12Q9NYV4 1490 aaPredicted RBP13.38□□□□□ -0.27
PAX6-236ENST00000638685 PIK3C2AO00443 1686 aa13.38□□□□□ -0.27
PAX6-236ENST00000638685 CCDC27Q2M243 656 aa13.38□□□□□ -0.27
PAX6-236ENST00000638685 PRKAR2BP31323 418 aa13.37□□□□□ -0.27
PAX6-236ENST00000638685 MARF1Q9Y4F3 1742 aaKnown RBP13.36□□□□□ -0.27
PAX6-236ENST00000638685 WDR63Q8IWG1 891 aa13.36□□□□□ -0.27
PAX6-236ENST00000638685 IPO9Q96P70 1041 aaKnown RBP13.36□□□□□ -0.27
PAX6-236ENST00000638685 NOP58Q9Y2X3 529 aaKnown RBP13.36□□□□□ -0.27
PAX6-236ENST00000638685 FCHSD2O94868 740 aa13.35□□□□□ -0.27
PAX6-236ENST00000638685 NUTM2GQ5VZR2 741 aa13.35□□□□□ -0.27
PAX6-236ENST00000638685 TSR2Q969E8 191 aaKnown RBP13.35□□□□□ -0.27
PAX6-236ENST00000638685 USP31Q70CQ4 1352 aa13.35□□□□□ -0.27
PAX6-236ENST00000638685 MAPK8IP3Q9UPT6 1336 aa13.35□□□□□ -0.27
PAX6-236ENST00000638685 ANKARQ7Z5J8 1434 aa13.35□□□□□ -0.27
PAX6-236ENST00000638685 RIPK4P57078 832 aa13.35□□□□□ -0.27
PAX6-236ENST00000638685 HSP90AB2PQ58FF8 381 aa13.35□□□□□ -0.27
PAX6-236ENST00000638685 DLG5Q8TDM6 1919 aa13.34□□□□□ -0.27
PAX6-236ENST00000638685 CENPQQ7L2Z9 268 aaPredicted RBP13.34□□□□□ -0.27
PAX6-236ENST00000638685 PDE4AP27815 886 aa13.34□□□□□ -0.27
PAX6-236ENST00000638685 EIF4A2Q14240 407 aaKnown RBP13.34□□□□□ -0.27
PAX6-236ENST00000638685 NCBP3Q53F19 620 aaKnown RBP13.34□□□□□ -0.27
PAX6-236ENST00000638685 AEBP1Q8IUX7 1158 aa13.34□□□□□ -0.27
PAX6-236ENST00000638685 ADGRL3Q9HAR2 1447 aa13.33□□□□□ -0.27
PAX6-236ENST00000638685 HSPA2P54652 639 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms