RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 TNS3Q68CZ2 1445 aa26.85■■□□□ 1.89
HLA-A-209ENST00000638375 ILDR1Q86SU0 546 aaPredicted RBP26.85■■□□□ 1.89
HLA-A-209ENST00000638375 LRRC59Q96AG4 307 aaKnown RBP26.85■■□□□ 1.89
HLA-A-209ENST00000638375 BRD4O60885 1362 aaPredicted RBP26.84■■□□□ 1.89
HLA-A-209ENST00000638375 PANK3Q9H999 370 aa26.84■■□□□ 1.89
HLA-A-209ENST00000638375 TTC21BQ7Z4L5 1316 aa26.84■■□□□ 1.89
HLA-A-209ENST00000638375 EDC4Q6P2E9 1401 aaKnown RBP26.83■■□□□ 1.89
HLA-A-209ENST00000638375 ZNF316A6NFI3 1004 aaPredicted RBP26.83■■□□□ 1.89
HLA-A-209ENST00000638375 PAK3O75914 559 aaPredicted RBP26.83■■□□□ 1.89
HLA-A-209ENST00000638375 CARD14Q9BXL6 1004 aa26.83■■□□□ 1.89
HLA-A-209ENST00000638375 ALS2Q96Q42 1657 aa26.82■■□□□ 1.88
HLA-A-209ENST00000638375 PNPLA6Q8IY17 1366 aa26.81■■□□□ 1.88
HLA-A-209ENST00000638375 NSD3Q9BZ95 1437 aa26.8■■□□□ 1.88
HLA-A-209ENST00000638375 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.79■■□□□ 1.88
HLA-A-209ENST00000638375 JCADQ9P266 1359 aa26.79■■□□□ 1.88
HLA-A-209ENST00000638375 LMOD2Q6P5Q4 547 aa26.78■■□□□ 1.88
HLA-A-209ENST00000638375 TTC21AQ8NDW8 1320 aa26.78■■□□□ 1.88
HLA-A-209ENST00000638375 ARHGEF10O15013 1369 aa26.77■■□□□ 1.88
HLA-A-209ENST00000638375 PIK3C2AO00443 1686 aa26.76■■□□□ 1.87
HLA-A-209ENST00000638375 SHPRHQ149N8 1683 aa26.76■■□□□ 1.87
HLA-A-209ENST00000638375 NME9Q86XW9 330 aa26.75■■□□□ 1.87
HLA-A-209ENST00000638375 ABTB2Q8N961 1025 aa26.75■■□□□ 1.87
HLA-A-209ENST00000638375 NUTM2GQ5VZR2 741 aa26.74■■□□□ 1.87
HLA-A-209ENST00000638375 COL22A1Q8NFW1 1626 aaPredicted RBP26.74■■□□□ 1.87
HLA-A-209ENST00000638375 ZRANB1Q9UGI0 708 aa26.72■■□□□ 1.87
HLA-A-209ENST00000638375 MED1Q15648 1581 aaPredicted RBP26.71■■□□□ 1.87
HLA-A-209ENST00000638375 PER1O15534 1290 aaPredicted RBP26.71■■□□□ 1.87
HLA-A-209ENST00000638375 USP31Q70CQ4 1352 aa26.7■■□□□ 1.86
HLA-A-209ENST00000638375 FYB1O15117 783 aa26.69■■□□□ 1.86
HLA-A-209ENST00000638375 NLRP6P59044 892 aa26.69■■□□□ 1.86
HLA-A-209ENST00000638375 DDX10Q13206 875 aaKnown RBP26.69■■□□□ 1.86
HLA-A-209ENST00000638375 PLEKHG5O94827 1062 aa26.68■■□□□ 1.86
HLA-A-209ENST00000638375 CABLES1Q8TDN4 633 aa26.68■■□□□ 1.86
HLA-A-209ENST00000638375 MARF1Q9Y4F3 1742 aaKnown RBP26.68■■□□□ 1.86
HLA-A-209ENST00000638375 CRYBG1Q9Y4K1 1723 aa26.68■■□□□ 1.86
HLA-A-209ENST00000638375 USP19O94966 1318 aa26.67■■□□□ 1.86
HLA-A-209ENST00000638375 CGNL1Q0VF96 1302 aa26.67■■□□□ 1.86
HLA-A-209ENST00000638375 OVOS2A0A0J9YW53 1432 aa26.67■■□□□ 1.86
HLA-A-209ENST00000638375 OVOS2Q6IE36 1432 aa26.67■■□□□ 1.86
HLA-A-209ENST00000638375 NLRP13Q86W25 1043 aa26.67■■□□□ 1.86
HLA-A-209ENST00000638375 KNSTRNQ9Y448 316 aa26.67■■□□□ 1.86
HLA-A-209ENST00000638375 USP54Q70EL1 1684 aa26.66■■□□□ 1.86
HLA-A-209ENST00000638375 GGNBP2Q9H3C7 697 aa26.66■■□□□ 1.86
HLA-A-209ENST00000638375 SPATA31A6Q5VVP1 1343 aa26.65■■□□□ 1.86
HLA-A-209ENST00000638375 KIF20BQ96Q89 1820 aa26.65■■□□□ 1.86
HLA-A-209ENST00000638375 ABCA3Q99758 1704 aa26.65■■□□□ 1.86
HLA-A-209ENST00000638375 SLIT3O75094 1523 aa26.64■■□□□ 1.85
HLA-A-209ENST00000638375 AMER1Q5JTC6 1135 aaPredicted RBP26.63■■□□□ 1.85
HLA-A-209ENST00000638375 LRP6O75581 1613 aa26.63■■□□□ 1.85
HLA-A-209ENST00000638375 PHRF1Q9P1Y6 1649 aaKnown RBP26.63■■□□□ 1.85
HLA-A-209ENST00000638375 NUTM2BA6NNL0 878 aaPredicted RBP26.62■■□□□ 1.85
HLA-A-209ENST00000638375 NUTM2EB1AL46 878 aaPredicted RBP26.62■■□□□ 1.85
HLA-A-209ENST00000638375 NUTM2AQ8IVF1 878 aaPredicted RBP26.62■■□□□ 1.85
HLA-A-209ENST00000638375 COG3Q96JB2 828 aa26.61■■□□□ 1.85
HLA-A-209ENST00000638375 NSD2O96028 1365 aa26.59■■□□□ 1.85
HLA-A-209ENST00000638375 GCP02774 474 aa26.58■■□□□ 1.85
HLA-A-209ENST00000638375 HAP1P54257 671 aaPredicted RBP26.57■■□□□ 1.84
HLA-A-209ENST00000638375 NPC1L1Q9UHC9 1359 aa26.57■■□□□ 1.84
HLA-A-209ENST00000638375 NFAT5O94916 1531 aa26.56■■□□□ 1.84
HLA-A-209ENST00000638375 SOX12O15370 315 aa26.55■■□□□ 1.84
HLA-A-209ENST00000638375 ANKRD26Q9UPS8 1709 aa26.55■■□□□ 1.84
HLA-A-209ENST00000638375 ADAMTS2O95450 1211 aa26.54■■□□□ 1.84
HLA-A-209ENST00000638375 CC2D1BQ5T0F9 858 aaKnown RBP26.54■■□□□ 1.84
HLA-A-209ENST00000638375 KCNH5Q8NCM2 988 aa26.53■■□□□ 1.84
HLA-A-209ENST00000638375 FBLN1P23142 703 aa26.52■■□□□ 1.84
HLA-A-209ENST00000638375 ZC3H6P61129 1189 aaKnown RBP26.52■■□□□ 1.84
HLA-A-209ENST00000638375 KIAA0232Q92628 1395 aa26.51■■□□□ 1.83
HLA-A-209ENST00000638375 CPDO75976 1380 aa26.5■■□□□ 1.83
HLA-A-209ENST00000638375 CNGB1Q14028 1251 aaPredicted RBP26.5■■□□□ 1.83
HLA-A-209ENST00000638375 MORC1Q86VD1 984 aa26.49■■□□□ 1.83
HLA-A-209ENST00000638375 MEX3CQ5U5Q3 659 aaKnown RBP26.47■■□□□ 1.83
HLA-A-209ENST00000638375 ARHGEF25Q86VW2 580 aa26.47■■□□□ 1.83
HLA-A-209ENST00000638375 FAM83GA6ND36 823 aa26.46■■□□□ 1.83
HLA-A-209ENST00000638375 TNNT2P45379 298 aaPredicted RBP26.46■■□□□ 1.83
HLA-A-209ENST00000638375 PRDM11Q9NQV5 511 aa26.46■■□□□ 1.83
HLA-A-209ENST00000638375 CHRNA2Q15822 529 aa26.45■■□□□ 1.82
HLA-A-209ENST00000638375 C8orf37Q96NL8 207 aa26.45■■□□□ 1.82
HLA-A-209ENST00000638375 AATKQ6ZMQ8 1374 aa26.45■■□□□ 1.82
HLA-A-209ENST00000638375 ZBTB7CA1YPR0 619 aa26.44■■□□□ 1.82
HLA-A-209ENST00000638375 RRS1Q15050 365 aaKnown RBP26.44■■□□□ 1.82
HLA-A-209ENST00000638375 MAP3K19Q56UN5 1328 aa26.43■■□□□ 1.82
HLA-A-209ENST00000638375 COL14A1Q05707 1796 aaKnown RBP26.42■■□□□ 1.82
HLA-A-209ENST00000638375 LMO7Q8WWI1 1683 aa26.41■■□□□ 1.82
HLA-A-209ENST00000638375 LTN1O94822 1766 aa26.41■■□□□ 1.82
HLA-A-209ENST00000638375 SLIT2O94813 1529 aa26.4■■□□□ 1.82
HLA-A-209ENST00000638375 NGLY1Q96IV0 654 aa26.4■■□□□ 1.82
HLA-A-209ENST00000638375 EMILIN1Q9Y6C2 1016 aa26.4■■□□□ 1.82
HLA-A-209ENST00000638375 PARD3Q8TEW0 1356 aa26.4■■□□□ 1.82
HLA-A-209ENST00000638375 COL18A1P39060 1754 aa26.4■■□□□ 1.82
HLA-A-209ENST00000638375 PLCH1Q4KWH8 1693 aa26.39■■□□□ 1.82
HLA-A-209ENST00000638375 POLKQ9UBT6 870 aa26.39■■□□□ 1.82
HLA-A-209ENST00000638375 FNBP4Q8N3X1 1017 aaPredicted RBP26.38■■□□□ 1.81
HLA-A-209ENST00000638375 PEAK1Q9H792 1746 aa26.37■■□□□ 1.81
HLA-A-209ENST00000638375 AXIN2Q9Y2T1 843 aa26.37■■□□□ 1.81
HLA-A-209ENST00000638375 ABCC6O95255 1503 aa26.37■■□□□ 1.81
HLA-A-209ENST00000638375 CAMTA1Q9Y6Y1 1673 aa26.37■■□□□ 1.81
HLA-A-209ENST00000638375 AFF2P51816 1311 aa26.37■■□□□ 1.81
HLA-A-209ENST00000638375 BTG4Q9NY30 223 aa26.36■■□□□ 1.81
HLA-A-209ENST00000638375 SMG6Q86US8 1419 aaKnown RBP26.36■■□□□ 1.81
HLA-A-209ENST00000638375 RTL1A6NKG5 1358 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms