RNA–Protein interactions for RNA: ENST00000638301.1

HNRNPU-213, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 3,650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-213ENST00000638301 STK26Q9P289 416 aa8.53□□□□□ -1.04
HNRNPU-213ENST00000638301 MED14O60244 1454 aa8.52□□□□□ -1.05
HNRNPU-213ENST00000638301 SRPK2P78362 688 aaKnown RBP8.52□□□□□ -1.05
HNRNPU-213ENST00000638301 EXOSC9Q06265 439 aaKnown RBP8.52□□□□□ -1.05
HNRNPU-213ENST00000638301 DZIP1LQ8IYY4 767 aaKnown RBP8.52□□□□□ -1.05
HNRNPU-213ENST00000638301 TBC1D32Q96NH3 1257 aa8.52□□□□□ -1.05
HNRNPU-213ENST00000638301 SLC52A1Q9NWF4 448 aa8.52□□□□□ -1.05
HNRNPU-213ENST00000638301 PREX1Q8TCU6 1659 aa8.52□□□□□ -1.05
HNRNPU-213ENST00000638301 SENP3Q9H4L4 574 aaPredicted RBP8.52□□□□□ -1.05
HNRNPU-213ENST00000638301 TRIM27P14373 513 aa8.51□□□□□ -1.05
HNRNPU-213ENST00000638301 OSCARQ8IYS5 282 aa8.51□□□□□ -1.05
HNRNPU-213ENST00000638301 U2SURPO15042 1029 aaKnown RBP8.51□□□□□ -1.05
HNRNPU-213ENST00000638301 SSH1Q8WYL5 1049 aa8.51□□□□□ -1.05
HNRNPU-213ENST00000638301 YEATS2Q9ULM3 1422 aa8.51□□□□□ -1.05
HNRNPU-213ENST00000638301 PRAM1Q96QH2 718 aa8.51□□□□□ -1.05
HNRNPU-213ENST00000638301 ANTXR1Q9H6X2 564 aa8.51□□□□□ -1.05
HNRNPU-213ENST00000638301 BRPF3Q9ULD4 1205 aa8.51□□□□□ -1.05
HNRNPU-213ENST00000638301 ATAD2Q6PL18 1390 aa8.51□□□□□ -1.05
HNRNPU-213ENST00000638301 PNPLA6Q8IY17 1366 aa8.51□□□□□ -1.05
HNRNPU-213ENST00000638301 MINK1Q8N4C8 1332 aaPredicted RBP8.5□□□□□ -1.05
HNRNPU-213ENST00000638301 YTHDC2Q9H6S0 1430 aaKnown RBP8.5□□□□□ -1.05
HNRNPU-213ENST00000638301 FTSJ3Q8IY81 847 aaKnown RBP8.5□□□□□ -1.05
HNRNPU-213ENST00000638301 SMC4Q9NTJ3 1288 aa8.5□□□□□ -1.05
HNRNPU-213ENST00000638301 IL16Q14005 1332 aa8.5□□□□□ -1.05
HNRNPU-213ENST00000638301 HDAC1Q13547 482 aaPredicted RBP8.5□□□□□ -1.05
HNRNPU-213ENST00000638301 BECN1Q14457 450 aa8.5□□□□□ -1.05
HNRNPU-213ENST00000638301 ARHGEF40Q8TER5 1519 aa8.49□□□□□ -1.05
HNRNPU-213ENST00000638301 TERF2IPQ9NYB0 399 aa8.49□□□□□ -1.05
HNRNPU-213ENST00000638301 KIF20BQ96Q89 1820 aa8.49□□□□□ -1.05
HNRNPU-213ENST00000638301 ATF7IPQ6VMQ6 1270 aa8.49□□□□□ -1.05
HNRNPU-213ENST00000638301 NOB1Q9ULX3 412 aaKnown RBP8.49□□□□□ -1.05
HNRNPU-213ENST00000638301 ALKQ9UM73 1620 aa8.49□□□□□ -1.05
HNRNPU-213ENST00000638301 RIPK4P57078 832 aa8.49□□□□□ -1.05
HNRNPU-213ENST00000638301 TBC1D2Q9BYX2 928 aa8.49□□□□□ -1.05
HNRNPU-213ENST00000638301 RTN4Q9NQC3 1192 aaKnown RBP8.49□□□□□ -1.05
HNRNPU-213ENST00000638301 DIAPH1O60610 1272 aaKnown RBP8.48□□□□□ -1.05
HNRNPU-213ENST00000638301 SLKQ9H2G2 1235 aaPredicted RBP8.48□□□□□ -1.05
HNRNPU-213ENST00000638301 DDX19BQ9UMR2 479 aa8.48□□□□□ -1.05
HNRNPU-213ENST00000638301 CDC42BPGQ6DT37 1551 aa8.48□□□□□ -1.05
HNRNPU-213ENST00000638301 CDK19Q9BWU1 502 aa8.48□□□□□ -1.05
HNRNPU-213ENST00000638301 UPF2Q9HAU5 1272 aaKnown RBP8.48□□□□□ -1.05
HNRNPU-213ENST00000638301 ZBTB40Q9NUA8 1239 aa8.48□□□□□ -1.05
HNRNPU-213ENST00000638301 POGKQ9P215 609 aa8.48□□□□□ -1.05
HNRNPU-213ENST00000638301 FBXO31Q5XUX0 539 aaPredicted RBP8.47□□□□□ -1.05
HNRNPU-213ENST00000638301 ITPRIPQ8IWB1 547 aa8.47□□□□□ -1.05
HNRNPU-213ENST00000638301 SMC5Q8IY18 1101 aa8.47□□□□□ -1.05
HNRNPU-213ENST00000638301 TMEM57Q8N5G2 664 aa8.47□□□□□ -1.05
HNRNPU-213ENST00000638301 CABP1Q9NZU7 370 aa8.47□□□□□ -1.05
HNRNPU-213ENST00000638301 LRRC7Q96NW7 1537 aa8.47□□□□□ -1.05
HNRNPU-213ENST00000638301 FCHSD2O94868 740 aa8.46□□□□□ -1.06
HNRNPU-213ENST00000638301 FBLN1P23142 703 aa8.46□□□□□ -1.06
HNRNPU-213ENST00000638301 HDGFL2Q7Z4V5 671 aaPredicted RBP8.46□□□□□ -1.06
HNRNPU-213ENST00000638301 FAM135BQ49AJ0 1406 aa8.46□□□□□ -1.06
HNRNPU-213ENST00000638301 RSPH6AQ9H0K4 717 aa8.45□□□□□ -1.06
HNRNPU-213ENST00000638301 MAP2P11137 1827 aaKnown RBP8.45□□□□□ -1.06
HNRNPU-213ENST00000638301 POLKQ9UBT6 870 aa8.45□□□□□ -1.06
HNRNPU-213ENST00000638301 ALDH1L2Q3SY69 923 aa8.45□□□□□ -1.06
HNRNPU-213ENST00000638301 C22orf23Q9BZE7 217 aa8.45□□□□□ -1.06
HNRNPU-213ENST00000638301 PNNQ9H307 717 aaKnown RBP8.45□□□□□ -1.06
HNRNPU-213ENST00000638301 KIF16BQ96L93 1317 aa8.45□□□□□ -1.06
HNRNPU-213ENST00000638301 BRPF1P55201 1214 aaPredicted RBP8.44□□□□□ -1.06
HNRNPU-213ENST00000638301 SETD1AO15047 1707 aaKnown RBP8.44□□□□□ -1.06
HNRNPU-213ENST00000638301 PPIP5K1Q6PFW1 1433 aa8.44□□□□□ -1.06
HNRNPU-213ENST00000638301 DLC1Q96QB1 1528 aa8.44□□□□□ -1.06
HNRNPU-213ENST00000638301 IPO8O15397 1037 aaKnown RBP8.44□□□□□ -1.06
HNRNPU-213ENST00000638301 PRKAR2BP31323 418 aa8.44□□□□□ -1.06
HNRNPU-213ENST00000638301 NUCB1Q02818 461 aa8.44□□□□□ -1.06
HNRNPU-213ENST00000638301 PHACTR3Q96KR7 559 aa8.44□□□□□ -1.06
HNRNPU-213ENST00000638301 MFAP1P55081 439 aaKnown RBP8.43□□□□□ -1.06
HNRNPU-213ENST00000638301 WAPLQ7Z5K2 1190 aa8.43□□□□□ -1.06
HNRNPU-213ENST00000638301 ATP7BP35670 1465 aa8.43□□□□□ -1.06
HNRNPU-213ENST00000638301 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.43□□□□□ -1.06
HNRNPU-213ENST00000638301 VAMP4O75379 141 aa8.42□□□□□ -1.06
HNRNPU-213ENST00000638301 A2ML1A8K2U0 1454 aa8.42□□□□□ -1.06
HNRNPU-213ENST00000638301 ZBTB7BO15156 539 aaPredicted RBP8.42□□□□□ -1.06
HNRNPU-213ENST00000638301 NFE2L2Q16236 605 aa8.42□□□□□ -1.06
HNRNPU-213ENST00000638301 SPRYD3Q8NCJ5 442 aa8.42□□□□□ -1.06
HNRNPU-213ENST00000638301 ZNF428Q96B54 188 aa8.42□□□□□ -1.06
HNRNPU-213ENST00000638301 THUMPD2Q9BTF0 503 aaKnown RBP8.42□□□□□ -1.06
HNRNPU-213ENST00000638301 CPSF1Q10570 1443 aaKnown RBP8.42□□□□□ -1.06
HNRNPU-213ENST00000638301 HMOX1P09601 288 aa8.41□□□□□ -1.06
HNRNPU-213ENST00000638301 MRPL50Q8N5N7 158 aaKnown RBP8.41□□□□□ -1.06
HNRNPU-213ENST00000638301 TSPYL6Q8N831 410 aa8.41□□□□□ -1.06
HNRNPU-213ENST00000638301 PIK3R4Q99570 1358 aa8.41□□□□□ -1.06
HNRNPU-213ENST00000638301 IL13P35225 146 aa8.41□□□□□ -1.06
HNRNPU-213ENST00000638301 CHD1LQ86WJ1 897 aa8.41□□□□□ -1.06
HNRNPU-213ENST00000638301 DLG5Q8TDM6 1919 aa8.41□□□□□ -1.06
HNRNPU-213ENST00000638301 ZNF853P0CG23 659 aa8.41□□□□□ -1.06
HNRNPU-213ENST00000638301 LNPKQ9C0E8 428 aa8.41□□□□□ -1.06
HNRNPU-213ENST00000638301 ANO8Q9HCE9 1232 aaPredicted RBP8.41□□□□□ -1.06
HNRNPU-213ENST00000638301 EMILIN1Q9Y6C2 1016 aa8.41□□□□□ -1.06
HNRNPU-213ENST00000638301 PTCH1Q13635 1447 aa8.41□□□□□ -1.06
HNRNPU-213ENST00000638301 RBM25P49756 843 aaKnown RBP8.4□□□□□ -1.06
HNRNPU-213ENST00000638301 ARHGAP45Q92619 1136 aa8.4□□□□□ -1.06
HNRNPU-213ENST00000638301 NRXN3Q9Y4C0 1643 aa8.4□□□□□ -1.06
HNRNPU-213ENST00000638301 ZNF692Q9BU19 519 aaPredicted RBP8.4□□□□□ -1.06
HNRNPU-213ENST00000638301 STAG3Q9UJ98 1225 aa8.4□□□□□ -1.06
HNRNPU-213ENST00000638301 SPATA31D1Q6ZQQ2 1576 aa8.4□□□□□ -1.07
HNRNPU-213ENST00000638301 MCM4P33991 863 aa8.4□□□□□ -1.07
HNRNPU-213ENST00000638301 ZRANB1Q9UGI0 708 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms