RNA–Protein interactions for RNA: ENST00000638281.1

GFAP-225, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5 BASIC

Gene GFAP, Length 2,099 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-225ENST00000638281 CFAP53Q96M91 514 aa20.68■□□□□ 0.9
GFAP-225ENST00000638281 AKAP12Q02952 1782 aa20.68■□□□□ 0.9
GFAP-225ENST00000638281 ITSN1Q15811 1721 aa20.66■□□□□ 0.9
GFAP-225ENST00000638281 APAF1O14727 1248 aa20.66■□□□□ 0.9
GFAP-225ENST00000638281 ZNF521Q96K83 1311 aa20.66■□□□□ 0.9
GFAP-225ENST00000638281 NME9Q86XW9 330 aa20.65■□□□□ 0.9
GFAP-225ENST00000638281 NKTRP30414 1462 aaKnown RBP20.65■□□□□ 0.9
GFAP-225ENST00000638281 COL3A1P02461 1466 aaPredicted RBP20.64■□□□□ 0.89
GFAP-225ENST00000638281 ZRANB1Q9UGI0 708 aa20.64■□□□□ 0.89
GFAP-225ENST00000638281 PLEKHG3A1L390 1219 aa20.63■□□□□ 0.89
GFAP-225ENST00000638281 RRP1P56182 461 aaKnown RBP20.63■□□□□ 0.89
GFAP-225ENST00000638281 ZNF692Q9BU19 519 aaPredicted RBP20.63■□□□□ 0.89
GFAP-225ENST00000638281 CHD2O14647 1828 aaKnown RBP20.63■□□□□ 0.89
GFAP-225ENST00000638281 ACEP12821 1306 aa20.62■□□□□ 0.89
GFAP-225ENST00000638281 FBLN1P23142 703 aa20.62■□□□□ 0.89
GFAP-225ENST00000638281 NOP58Q9Y2X3 529 aaKnown RBP20.62■□□□□ 0.89
GFAP-225ENST00000638281 NPHP4O75161 1426 aaPredicted RBP20.61■□□□□ 0.89
GFAP-225ENST00000638281 RCAN3Q9UKA8 241 aa20.61■□□□□ 0.89
GFAP-225ENST00000638281 NRKQ7Z2Y5 1582 aa20.59■□□□□ 0.89
GFAP-225ENST00000638281 PNPLA6Q8IY17 1366 aa20.59■□□□□ 0.89
GFAP-225ENST00000638281 RUNDC1Q96C34 613 aa20.58■□□□□ 0.89
GFAP-225ENST00000638281 POLKQ9UBT6 870 aa20.58■□□□□ 0.89
GFAP-225ENST00000638281 RGPD8O14715 1765 aaPredicted RBP20.58■□□□□ 0.89
GFAP-225ENST00000638281 U2AF1L5P0DN76 240 aaPredicted RBP20.58■□□□□ 0.88
GFAP-225ENST00000638281 ANP32AP39687 249 aaKnown RBP20.58■□□□□ 0.88
GFAP-225ENST00000638281 U2AF1Q01081 240 aaKnown RBP eCLIP20.58■□□□□ 0.88
GFAP-225ENST00000638281 BCL11AQ9H165 835 aa20.58■□□□□ 0.88
GFAP-225ENST00000638281 USP6P35125 1406 aa20.57■□□□□ 0.88
GFAP-225ENST00000638281 GOLGA2Q08379 1002 aa20.57■□□□□ 0.88
GFAP-225ENST00000638281 TTC21BQ7Z4L5 1316 aa20.57■□□□□ 0.88
GFAP-225ENST00000638281 IQSEC2Q5JU85 1478 aa20.57■□□□□ 0.88
GFAP-225ENST00000638281 PMFBP1Q8TBY8 1022 aa20.56■□□□□ 0.88
GFAP-225ENST00000638281 COG3Q96JB2 828 aa20.56■□□□□ 0.88
GFAP-225ENST00000638281 MAP2P11137 1827 aaKnown RBP20.55■□□□□ 0.88
GFAP-225ENST00000638281 DUSP27Q5VZP5 1158 aa20.55■□□□□ 0.88
GFAP-225ENST00000638281 TCP11L2Q8N4U5 519 aa20.55■□□□□ 0.88
GFAP-225ENST00000638281 NGEFQ8N5V2 710 aa20.55■□□□□ 0.88
GFAP-225ENST00000638281 RBM33Q96EV2 1170 aaKnown RBP20.55■□□□□ 0.88
GFAP-225ENST00000638281 IPO9Q96P70 1041 aaKnown RBP20.55■□□□□ 0.88
GFAP-225ENST00000638281 NALCNQ8IZF0 1738 aa20.55■□□□□ 0.88
GFAP-225ENST00000638281 FMN2Q9NZ56 1722 aa20.55■□□□□ 0.88
GFAP-225ENST00000638281 SPINK5Q9NQ38 1064 aaPredicted RBP20.54■□□□□ 0.88
GFAP-225ENST00000638281 DMRT2Q9Y5R5 561 aa20.54■□□□□ 0.88
GFAP-225ENST00000638281 SSH2Q76I76 1423 aa20.54■□□□□ 0.88
GFAP-225ENST00000638281 TCERG1O14776 1098 aaKnown RBP20.54■□□□□ 0.88
GFAP-225ENST00000638281 U2SURPO15042 1029 aaKnown RBP20.54■□□□□ 0.88
GFAP-225ENST00000638281 PPM1GO15355 546 aaPredicted RBP20.54■□□□□ 0.88
GFAP-225ENST00000638281 SLFN5Q08AF3 891 aa20.54■□□□□ 0.88
GFAP-225ENST00000638281 RRP7AQ9Y3A4 280 aaKnown RBP20.54■□□□□ 0.88
GFAP-225ENST00000638281 EMILIN1Q9Y6C2 1016 aa20.54■□□□□ 0.88
GFAP-225ENST00000638281 ANKARQ7Z5J8 1434 aa20.53■□□□□ 0.88
GFAP-225ENST00000638281 DIAPH1O60610 1272 aaKnown RBP20.53■□□□□ 0.88
GFAP-225ENST00000638281 AATKQ6ZMQ8 1374 aa20.53■□□□□ 0.88
GFAP-225ENST00000638281 WWC1Q8IX03 1113 aa20.52■□□□□ 0.87
GFAP-225ENST00000638281 TRMT2AQ8IZ69 625 aaKnown RBP20.52■□□□□ 0.87
GFAP-225ENST00000638281 NEUROD2Q15784 382 aa20.51■□□□□ 0.87
GFAP-225ENST00000638281 OVOS2A0A0J9YW53 1432 aa20.5■□□□□ 0.87
GFAP-225ENST00000638281 OVOS2Q6IE36 1432 aa20.5■□□□□ 0.87
GFAP-225ENST00000638281 NGDNQ8NEJ9 315 aaKnown RBP20.5■□□□□ 0.87
GFAP-225ENST00000638281 PLEKHF1Q96S99 279 aa20.5■□□□□ 0.87
GFAP-225ENST00000638281 MS4A1P11836 297 aa20.49■□□□□ 0.87
GFAP-225ENST00000638281 RRS1Q15050 365 aaKnown RBP20.49■□□□□ 0.87
GFAP-225ENST00000638281 EXOC6Q8TAG9 804 aa20.49■□□□□ 0.87
GFAP-225ENST00000638281 PHF23Q9BUL5 403 aaPredicted RBP20.49■□□□□ 0.87
GFAP-225ENST00000638281 CDK12Q9NYV4 1490 aaPredicted RBP20.48■□□□□ 0.87
GFAP-225ENST00000638281 ADGRL3Q9HAR2 1447 aa20.47■□□□□ 0.87
GFAP-225ENST00000638281 NWD1Q149M9 1564 aa20.46■□□□□ 0.87
GFAP-225ENST00000638281 E9PSI1 815 aa20.46■□□□□ 0.87
GFAP-225ENST00000638281 TTC21AQ8NDW8 1320 aa20.46■□□□□ 0.87
GFAP-225ENST00000638281 ZBTB47Q9UFB7 747 aaPredicted RBP20.45■□□□□ 0.86
GFAP-225ENST00000638281 CCDC27Q2M243 656 aa20.44■□□□□ 0.86
GFAP-225ENST00000638281 USP31Q70CQ4 1352 aa20.44■□□□□ 0.86
GFAP-225ENST00000638281 PAK3O75914 559 aaPredicted RBP20.44■□□□□ 0.86
GFAP-225ENST00000638281 IL13P35225 146 aa20.44■□□□□ 0.86
GFAP-225ENST00000638281 NCBP3Q53F19 620 aaKnown RBP20.43■□□□□ 0.86
GFAP-225ENST00000638281 PIK3C2AO00443 1686 aa20.42■□□□□ 0.86
GFAP-225ENST00000638281 LRRC7Q96NW7 1537 aa20.42■□□□□ 0.86
GFAP-225ENST00000638281 FCHSD2O94868 740 aa20.41■□□□□ 0.86
GFAP-225ENST00000638281 TMPOP42166 694 aaKnown RBP20.41■□□□□ 0.86
GFAP-225ENST00000638281 RSPH6AQ9H0K4 717 aa20.41■□□□□ 0.86
GFAP-225ENST00000638281 KDM4FA0A1W2PPD8 638 aa20.41■□□□□ 0.86
GFAP-225ENST00000638281 PLIN1O60240 522 aa20.41■□□□□ 0.86
GFAP-225ENST00000638281 WDR63Q8IWG1 891 aa20.41■□□□□ 0.86
GFAP-225ENST00000638281 PHF8Q9UPP1 1060 aa20.41■□□□□ 0.86
GFAP-225ENST00000638281 MAPK8IP3Q9UPT6 1336 aa20.4■□□□□ 0.86
GFAP-225ENST00000638281 HSPA2P54652 639 aa20.4■□□□□ 0.86
GFAP-225ENST00000638281 C14orf37Q86TY3 774 aa20.4■□□□□ 0.86
GFAP-225ENST00000638281 HMOX1P09601 288 aa20.39■□□□□ 0.85
GFAP-225ENST00000638281 PRKAR2BP31323 418 aa20.39■□□□□ 0.85
GFAP-225ENST00000638281 PEAK1Q9H792 1746 aa20.39■□□□□ 0.85
GFAP-225ENST00000638281 SOX12O15370 315 aa20.38■□□□□ 0.85
GFAP-225ENST00000638281 PROSER2Q86WR7 435 aaPredicted RBP20.38■□□□□ 0.85
GFAP-225ENST00000638281 PNNQ9H307 717 aaKnown RBP20.38■□□□□ 0.85
GFAP-225ENST00000638281 TRIM35Q9UPQ4 493 aa20.38■□□□□ 0.85
GFAP-225ENST00000638281 BACH2Q9BYV9 841 aa20.38■□□□□ 0.85
GFAP-225ENST00000638281 PDE4AP27815 886 aa20.37■□□□□ 0.85
GFAP-225ENST00000638281 DEKP35659 375 aaKnown RBP20.36■□□□□ 0.85
GFAP-225ENST00000638281 ESCO1Q5FWF5 840 aa20.36■□□□□ 0.85
GFAP-225ENST00000638281 MARF1Q9Y4F3 1742 aaKnown RBP20.35■□□□□ 0.85
GFAP-225ENST00000638281 NLRP6P59044 892 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms