RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 HDGFL2Q7Z4V5 671 aaPredicted RBP6.09□□□□□ -1.43
GABRA1-220ENST00000638159 SPATA31A3Q5VYP0 1347 aa6.09□□□□□ -1.43
GABRA1-220ENST00000638159 EFCAB6Q5THR3 1501 aa6.09□□□□□ -1.43
GABRA1-220ENST00000638159 USP47Q96K76 1375 aa6.09□□□□□ -1.44
GABRA1-220ENST00000638159 SUPT6HQ7KZ85 1726 aaKnown RBP6.09□□□□□ -1.44
GABRA1-220ENST00000638159 MYOM3Q5VTT5 1437 aa6.09□□□□□ -1.44
GABRA1-220ENST00000638159 POLR3GLQ9BT43 218 aa6.09□□□□□ -1.44
GABRA1-220ENST00000638159 RRAGCQ9HB90 399 aa6.09□□□□□ -1.44
GABRA1-220ENST00000638159 RPGRIP1LQ68CZ1 1315 aa6.08□□□□□ -1.44
GABRA1-220ENST00000638159 DIP2CQ9Y2E4 1556 aa6.08□□□□□ -1.44
GABRA1-220ENST00000638159 PLSCR1O15162 318 aa6.08□□□□□ -1.44
GABRA1-220ENST00000638159 SLC27A3Q5K4L6 730 aa6.08□□□□□ -1.44
GABRA1-220ENST00000638159 CAMKK2Q96RR4 588 aa6.08□□□□□ -1.44
GABRA1-220ENST00000638159 SOS2Q07890 1332 aaPredicted RBP6.08□□□□□ -1.44
GABRA1-220ENST00000638159 ADGBQ8N7X0 1667 aa6.08□□□□□ -1.44
GABRA1-220ENST00000638159 PIM2Q9P1W9 311 aa6.08□□□□□ -1.44
GABRA1-220ENST00000638159 ACEP12821 1306 aa6.08□□□□□ -1.44
GABRA1-220ENST00000638159 PRDM15P57071 1507 aaPredicted RBP6.08□□□□□ -1.44
GABRA1-220ENST00000638159 TATP17735 454 aaPredicted RBP6.08□□□□□ -1.44
GABRA1-220ENST00000638159 PRDM10Q9NQV6 1147 aa6.08□□□□□ -1.44
GABRA1-220ENST00000638159 NLGN1Q8N2Q7 840 aa6.07□□□□□ -1.44
GABRA1-220ENST00000638159 RBM42Q9BTD8 480 aaKnown RBP6.07□□□□□ -1.44
GABRA1-220ENST00000638159 ARHGAP35Q9NRY4 1499 aa6.07□□□□□ -1.44
GABRA1-220ENST00000638159 NEURL4Q96JN8 1562 aa6.07□□□□□ -1.44
GABRA1-220ENST00000638159 SETBP1Q9Y6X0 1596 aa6.07□□□□□ -1.44
GABRA1-220ENST00000638159 EIF6P56537 245 aaKnown RBP6.07□□□□□ -1.44
GABRA1-220ENST00000638159 DEFB115Q30KQ5 88 aa6.07□□□□□ -1.44
GABRA1-220ENST00000638159 RALGAPBQ86X10 1494 aa6.07□□□□□ -1.44
GABRA1-220ENST00000638159 TRAK1Q9UPV9 953 aa6.07□□□□□ -1.44
GABRA1-220ENST00000638159 GPATCH8Q9UKJ3 1502 aaKnown RBP6.07□□□□□ -1.44
GABRA1-220ENST00000638159 DCCP43146 1447 aa6.06□□□□□ -1.44
GABRA1-220ENST00000638159 RTCBQ9Y3I0 505 aaKnown RBP6.06□□□□□ -1.44
GABRA1-220ENST00000638159 SYCP2Q9BX26 1530 aa6.06□□□□□ -1.44
GABRA1-220ENST00000638159 ERVK-7P63135 1459 aa6.06□□□□□ -1.44
GABRA1-220ENST00000638159 OVOS2A0A0G2JMS6 1433 aa6.06□□□□□ -1.44
GABRA1-220ENST00000638159 OVOS2A0A0J9YW53 1432 aa6.06□□□□□ -1.44
GABRA1-220ENST00000638159 OVOS2Q6IE36 1432 aa6.06□□□□□ -1.44
GABRA1-220ENST00000638159 IGSF1Q8N6C5 1336 aa6.06□□□□□ -1.44
GABRA1-220ENST00000638159 NF2P35240 595 aa6.06□□□□□ -1.44
GABRA1-220ENST00000638159 NBPF1Q3BBV0 1214 aa6.06□□□□□ -1.44
GABRA1-220ENST00000638159 BIN2Q9UBW5 565 aaPredicted RBP6.06□□□□□ -1.44
GABRA1-220ENST00000638159 NR2E3Q9Y5X4 410 aa6.06□□□□□ -1.44
GABRA1-220ENST00000638159 NSD3Q9BZ95 1437 aa6.06□□□□□ -1.44
GABRA1-220ENST00000638159 SLC34A2O95436 690 aa6.06□□□□□ -1.44
GABRA1-220ENST00000638159 CNKSR2Q8WXI2 1034 aa6.06□□□□□ -1.44
GABRA1-220ENST00000638159 SYNMO15061 1565 aa6.06□□□□□ -1.44
GABRA1-220ENST00000638159 SPATA31A5Q5VU36 1347 aa6.05□□□□□ -1.44
GABRA1-220ENST00000638159 SPATA31A7Q8IWB4 1347 aa6.05□□□□□ -1.44
GABRA1-220ENST00000638159 DLL1O00548 723 aa6.05□□□□□ -1.44
GABRA1-220ENST00000638159 LBX1P52954 281 aa6.05□□□□□ -1.44
GABRA1-220ENST00000638159 ANKRD13DQ6ZTN6 518 aa6.05□□□□□ -1.44
GABRA1-220ENST00000638159 BCL2L13Q9BXK5 485 aa6.05□□□□□ -1.44
GABRA1-220ENST00000638159 TIAM1Q13009 1591 aa6.05□□□□□ -1.44
GABRA1-220ENST00000638159 AKAP4Q5JQC9 854 aa6.05□□□□□ -1.44
GABRA1-220ENST00000638159 SOGA3Q5TF21 947 aa6.05□□□□□ -1.44
GABRA1-220ENST00000638159 PRPF38BQ5VTL8 546 aaKnown RBP6.05□□□□□ -1.44
GABRA1-220ENST00000638159 ADGRB2O60241 1585 aa6.05□□□□□ -1.44
GABRA1-220ENST00000638159 PHLPP1O60346 1717 aa6.05□□□□□ -1.44
GABRA1-220ENST00000638159 PLEKHG2Q9H7P9 1386 aa6.05□□□□□ -1.44
GABRA1-220ENST00000638159 PPM1GO15355 546 aaPredicted RBP6.05□□□□□ -1.44
GABRA1-220ENST00000638159 RTN4Q9NQC3 1192 aaKnown RBP6.05□□□□□ -1.44
GABRA1-220ENST00000638159 MED14O60244 1454 aa6.05□□□□□ -1.44
GABRA1-220ENST00000638159 ATRNO75882 1429 aa6.05□□□□□ -1.44
GABRA1-220ENST00000638159 MAST1Q9Y2H9 1570 aa6.05□□□□□ -1.44
GABRA1-220ENST00000638159 IL2RBP14784 551 aa6.04□□□□□ -1.44
GABRA1-220ENST00000638159 SLC4A8Q2Y0W8 1093 aa6.04□□□□□ -1.44
GABRA1-220ENST00000638159 TRAPPC3LQ5T215 181 aa6.04□□□□□ -1.44
GABRA1-220ENST00000638159 NMRK2Q9NPI5 230 aa6.04□□□□□ -1.44
GABRA1-220ENST00000638159 WAPLQ7Z5K2 1190 aa6.04□□□□□ -1.44
GABRA1-220ENST00000638159 PRAM1Q96QH2 718 aa6.04□□□□□ -1.44
GABRA1-220ENST00000638159 CHADLQ6NUI6 762 aa6.04□□□□□ -1.44
GABRA1-220ENST00000638159 HFM1A2PYH4 1435 aa6.03□□□□□ -1.44
GABRA1-220ENST00000638159 H0YIN7 160 aa6.03□□□□□ -1.44
GABRA1-220ENST00000638159 BARGINQ6ZT62 677 aa6.03□□□□□ -1.44
GABRA1-220ENST00000638159 GJA3Q9Y6H8 435 aa6.03□□□□□ -1.44
GABRA1-220ENST00000638159 ROCK1Q13464 1354 aa6.03□□□□□ -1.44
GABRA1-220ENST00000638159 SLC4A2P04920 1241 aa6.03□□□□□ -1.44
GABRA1-220ENST00000638159 ERFEQ4G0M1 354 aa6.03□□□□□ -1.44
GABRA1-220ENST00000638159 NCBP3Q53F19 620 aaKnown RBP6.03□□□□□ -1.44
GABRA1-220ENST00000638159 CWC22Q9HCG8 908 aaKnown RBP6.03□□□□□ -1.44
GABRA1-220ENST00000638159 KDM5CP41229 1560 aa6.03□□□□□ -1.44
GABRA1-220ENST00000638159 PPRC1Q5VV67 1664 aaKnown RBP6.03□□□□□ -1.44
GABRA1-220ENST00000638159 LARP1Q6PKG0 1096 aaKnown RBP6.03□□□□□ -1.44
GABRA1-220ENST00000638159 GNPATO15228 680 aa6.02□□□□□ -1.45
GABRA1-220ENST00000638159 MPRIPQ6WCQ1 1025 aa6.02□□□□□ -1.45
GABRA1-220ENST00000638159 TMF1P82094 1093 aa6.02□□□□□ -1.45
GABRA1-220ENST00000638159 TMEM132EQ6IEE7 984 aa6.02□□□□□ -1.45
GABRA1-220ENST00000638159 CASKIN1Q8WXD9 1431 aa6.02□□□□□ -1.45
GABRA1-220ENST00000638159 CDC42BPAQ5VT25 1732 aa6.02□□□□□ -1.45
GABRA1-220ENST00000638159 TMEM88BA6NKF7 163 aa6.02□□□□□ -1.45
GABRA1-220ENST00000638159 SPATA31A1Q5TZJ5 1347 aa6.02□□□□□ -1.45
GABRA1-220ENST00000638159 C1orf167Q5SNV9 1468 aa6.02□□□□□ -1.45
GABRA1-220ENST00000638159 KIF22Q14807 665 aa6.01□□□□□ -1.45
GABRA1-220ENST00000638159 PNMA8AQ86V59 439 aaPredicted RBP6.01□□□□□ -1.45
GABRA1-220ENST00000638159 TMOD3Q9NYL9 352 aa6.01□□□□□ -1.45
GABRA1-220ENST00000638159 TCIRG1Q13488 830 aa6.01□□□□□ -1.45
GABRA1-220ENST00000638159 DEPDC5O75140 1603 aa6.01□□□□□ -1.45
GABRA1-220ENST00000638159 OTUD7BQ6GQQ9 843 aa6.01□□□□□ -1.45
GABRA1-220ENST00000638159 ITSN2Q9NZM3 1697 aa6.01□□□□□ -1.45
GABRA1-220ENST00000638159 SOX10P56693 466 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms