RNA–Protein interactions for RNA: ENST00000638154.2

TCF4-290, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 7,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-290ENST00000638154 RABEP1Q15276 862 aa6.48□□□□□ -1.37
TCF4-290ENST00000638154 CCDC112Q8NEF3 446 aa6.48□□□□□ -1.37
TCF4-290ENST00000638154 TRAK2O60296 914 aa6.47□□□□□ -1.37
TCF4-290ENST00000638154 PRDM16Q9HAZ2 1276 aa6.47□□□□□ -1.37
TCF4-290ENST00000638154 KIF5CO60282 957 aa6.47□□□□□ -1.37
TCF4-290ENST00000638154 EIF3JO75822 258 aaKnown RBP6.47□□□□□ -1.37
TCF4-290ENST00000638154 TERF1P54274 439 aa6.47□□□□□ -1.37
TCF4-290ENST00000638154 RGL3Q3MIN7 710 aa6.47□□□□□ -1.37
TCF4-290ENST00000638154 PPP4R4Q6NUP7 873 aa6.47□□□□□ -1.37
TCF4-290ENST00000638154 SHTN1A0MZ66 631 aa6.47□□□□□ -1.37
TCF4-290ENST00000638154 LMAN1P49257 510 aa6.47□□□□□ -1.37
TCF4-290ENST00000638154 KRT222Q8N1A0 295 aa6.47□□□□□ -1.37
TCF4-290ENST00000638154 KIF2CQ99661 725 aa6.47□□□□□ -1.37
TCF4-290ENST00000638154 C11orf95C9JLR9 678 aaPredicted RBP6.47□□□□□ -1.37
TCF4-290ENST00000638154 EXOC8Q8IYI6 725 aa6.47□□□□□ -1.37
TCF4-290ENST00000638154 RSRC1Q96IZ7 334 aaKnown RBP6.47□□□□□ -1.37
TCF4-290ENST00000638154 XPCQ01831 940 aaPredicted RBP6.47□□□□□ -1.37
TCF4-290ENST00000638154 WWC2Q6AWC2 1192 aa6.47□□□□□ -1.37
TCF4-290ENST00000638154 IVLP07476 585 aa6.46□□□□□ -1.37
TCF4-290ENST00000638154 SEMA3FQ13275 785 aa6.46□□□□□ -1.37
TCF4-290ENST00000638154 CTDP1Q9Y5B0 961 aaPredicted RBP6.46□□□□□ -1.37
TCF4-290ENST00000638154 SPATA24Q86W54 205 aa6.46□□□□□ -1.37
TCF4-290ENST00000638154 DESP17661 470 aa6.46□□□□□ -1.38
TCF4-290ENST00000638154 CEP128Q6ZU80 1094 aa6.46□□□□□ -1.38
TCF4-290ENST00000638154 CCDC114Q96M63 670 aa6.46□□□□□ -1.38
TCF4-290ENST00000638154 MPP4Q96JB8 637 aa6.46□□□□□ -1.38
TCF4-290ENST00000638154 RNF187Q5TA31 235 aaPredicted RBP6.46□□□□□ -1.38
TCF4-290ENST00000638154 CCDC146Q8IYE0 955 aa6.46□□□□□ -1.38
TCF4-290ENST00000638154 ANKRD62A6NC57 917 aa6.45□□□□□ -1.38
TCF4-290ENST00000638154 ZBTB17Q13105 803 aa6.45□□□□□ -1.38
TCF4-290ENST00000638154 FAM161AQ3B820 660 aa6.45□□□□□ -1.38
TCF4-290ENST00000638154 LRRC23Q53EV4 343 aaPredicted RBP6.45□□□□□ -1.38
TCF4-290ENST00000638154 TSPY2A6NKD2 308 aa6.45□□□□□ -1.38
TCF4-290ENST00000638154 TSPY3P0CV98 308 aa6.45□□□□□ -1.38
TCF4-290ENST00000638154 TSPY8P0CW00 308 aa6.45□□□□□ -1.38
TCF4-290ENST00000638154 TSPY1Q01534 308 aa6.45□□□□□ -1.38
TCF4-290ENST00000638154 KRBA2Q6ZNG9 492 aa6.45□□□□□ -1.38
TCF4-290ENST00000638154 TAOK3Q9H2K8 898 aa6.45□□□□□ -1.38
TCF4-290ENST00000638154 RANBP1P43487 201 aa6.45□□□□□ -1.38
TCF4-290ENST00000638154 SUFUQ9UMX1 484 aa6.45□□□□□ -1.38
TCF4-290ENST00000638154 NBPF7P0C2Y1 421 aaPredicted RBP6.45□□□□□ -1.38
TCF4-290ENST00000638154 NUCB2P80303 420 aa6.45□□□□□ -1.38
TCF4-290ENST00000638154 CCDC152Q4G0S7 254 aa6.45□□□□□ -1.38
TCF4-290ENST00000638154 MORC4Q8TE76 937 aa6.45□□□□□ -1.38
TCF4-290ENST00000638154 AMOTQ4VCS5 1084 aa6.45□□□□□ -1.38
TCF4-290ENST00000638154 SPTY2D1Q68D10 685 aaPredicted RBP6.45□□□□□ -1.38
TCF4-290ENST00000638154 NBPF3Q9H094 633 aa6.45□□□□□ -1.38
TCF4-290ENST00000638154 GET4Q7L5D6 327 aaPredicted RBP6.45□□□□□ -1.38
TCF4-290ENST00000638154 SLC24A3Q9HC58 644 aa6.45□□□□□ -1.38
TCF4-290ENST00000638154 PPFIA3O75145 1194 aa6.44□□□□□ -1.38
TCF4-290ENST00000638154 NBPF11Q86T75 865 aa6.44□□□□□ -1.38
TCF4-290ENST00000638154 PRPF38AQ8NAV1 312 aaKnown RBP6.44□□□□□ -1.38
TCF4-290ENST00000638154 RLBP1P12271 317 aa6.44□□□□□ -1.38
TCF4-290ENST00000638154 DIXDC1Q155Q3 683 aa6.44□□□□□ -1.38
TCF4-290ENST00000638154 PROCA1Q8NCQ7 364 aaPredicted RBP6.44□□□□□ -1.38
TCF4-290ENST00000638154 PFDN1O60925 122 aa6.44□□□□□ -1.38
TCF4-290ENST00000638154 DAAM2Q86T65 1068 aa6.44□□□□□ -1.38
TCF4-290ENST00000638154 CCDC102AQ96A19 550 aa6.44□□□□□ -1.38
TCF4-290ENST00000638154 BRMS1Q9HCU9 246 aa6.44□□□□□ -1.38
TCF4-290ENST00000638154 SATB2Q9UPW6 733 aa6.44□□□□□ -1.38
TCF4-290ENST00000638154 CRACR2AQ9BSW2 395 aa6.44□□□□□ -1.38
TCF4-290ENST00000638154 NBPF9Q3BBW0 867 aa6.44□□□□□ -1.38
TCF4-290ENST00000638154 JAKMIP3Q5VZ66 844 aa6.44□□□□□ -1.38
TCF4-290ENST00000638154 USP25Q9UHP3 1055 aa6.44□□□□□ -1.38
TCF4-290ENST00000638154 SMC3Q9UQE7 1217 aa6.44□□□□□ -1.38
TCF4-290ENST00000638154 DEUP1Q05D60 604 aa6.43□□□□□ -1.38
TCF4-290ENST00000638154 DDX27Q96GQ7 796 aaKnown RBP6.43□□□□□ -1.38
TCF4-290ENST00000638154 TMCO3Q6UWJ1 677 aa6.43□□□□□ -1.38
TCF4-290ENST00000638154 LUZP1Q86V48 1076 aa6.43□□□□□ -1.38
TCF4-290ENST00000638154 PRKG1Q13976 671 aa6.43□□□□□ -1.38
TCF4-290ENST00000638154 FAM212AQ96EL1 285 aa6.43□□□□□ -1.38
TCF4-290ENST00000638154 NBPF8Q3BBV2 869 aa6.43□□□□□ -1.38
TCF4-290ENST00000638154 CDCA8Q53HL2 280 aa6.43□□□□□ -1.38
TCF4-290ENST00000638154 WDR75Q8IWA0 830 aaKnown RBP6.43□□□□□ -1.38
TCF4-290ENST00000638154 FRMD3A2A2Y4 597 aa6.43□□□□□ -1.38
TCF4-290ENST00000638154 SF3A1Q15459 793 aaKnown RBP6.43□□□□□ -1.38
TCF4-290ENST00000638154 HSP90AA5PQ58FG0 334 aa6.43□□□□□ -1.38
TCF4-290ENST00000638154 NFXL1Q6ZNB6 911 aa6.43□□□□□ -1.38
TCF4-290ENST00000638154 PDCD7Q8N8D1 485 aaKnown RBP6.43□□□□□ -1.38
TCF4-290ENST00000638154 PPFIBP2Q8ND30 876 aa6.43□□□□□ -1.38
TCF4-290ENST00000638154 PPM1EQ8WY54 764 aa6.43□□□□□ -1.38
TCF4-290ENST00000638154 SCLT1Q96NL6 688 aa6.43□□□□□ -1.38
TCF4-290ENST00000638154 RBM27Q9P2N5 1060 aaKnown RBP6.43□□□□□ -1.38
TCF4-290ENST00000638154 LRRFIP2Q9Y608 721 aaKnown RBP6.43□□□□□ -1.38
TCF4-290ENST00000638154 FLIIQ13045 1269 aa6.42□□□□□ -1.38
TCF4-290ENST00000638154 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.42□□□□□ -1.38
TCF4-290ENST00000638154 TSPY26PQ9H489 355 aa6.42□□□□□ -1.38
TCF4-290ENST00000638154 MARCH6O60337 910 aa6.42□□□□□ -1.38
TCF4-290ENST00000638154 PDE1CQ14123 709 aaPredicted RBP6.42□□□□□ -1.38
TCF4-290ENST00000638154 ZNF280DQ6N043 979 aa6.42□□□□□ -1.38
TCF4-290ENST00000638154 SMC2O95347 1197 aa6.42□□□□□ -1.38
TCF4-290ENST00000638154 PSMC4P43686 418 aa6.42□□□□□ -1.38
TCF4-290ENST00000638154 RMDN2Q96LZ7 410 aa6.42□□□□□ -1.38
TCF4-290ENST00000638154 NAP1L4Q99733 375 aaKnown RBP6.42□□□□□ -1.38
TCF4-290ENST00000638154 TRIM4Q9C037 500 aa6.42□□□□□ -1.38
TCF4-290ENST00000638154 G3BP2Q9UN86 482 aaKnown RBP6.42□□□□□ -1.38
TCF4-290ENST00000638154 ERLIN2O94905 339 aa6.42□□□□□ -1.38
TCF4-290ENST00000638154 NGEFQ8N5V2 710 aa6.42□□□□□ -1.38
TCF4-290ENST00000638154 ZC4H2Q9NQZ6 224 aa6.42□□□□□ -1.38
TCF4-290ENST00000638154 OGFRQ9NZT2 677 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms