RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 NGEFQ8N5V2 710 aa16.22■□□□□ 0.19
CACNA1D-228ENST00000638120 ANKARQ7Z5J8 1434 aa16.22■□□□□ 0.19
CACNA1D-228ENST00000638120 CDCA7LQ96GN5 454 aa16.22■□□□□ 0.19
CACNA1D-228ENST00000638120 USP6P35125 1406 aa16.21■□□□□ 0.19
CACNA1D-228ENST00000638120 PNPLA6Q8IY17 1366 aa16.21■□□□□ 0.19
CACNA1D-228ENST00000638120 ACEP12821 1306 aa16.21■□□□□ 0.19
CACNA1D-228ENST00000638120 APAF1O14727 1248 aa16.21■□□□□ 0.19
CACNA1D-228ENST00000638120 RGPD8O14715 1765 aaPredicted RBP16.2■□□□□ 0.18
CACNA1D-228ENST00000638120 NWD1Q149M9 1564 aa16.2■□□□□ 0.18
CACNA1D-228ENST00000638120 ERICH6BQ5W0A0 696 aa16.2■□□□□ 0.18
CACNA1D-228ENST00000638120 NME9Q86XW9 330 aa16.2■□□□□ 0.18
CACNA1D-228ENST00000638120 NUTM2FA1L443 756 aa16.19■□□□□ 0.18
CACNA1D-228ENST00000638120 AATKQ6ZMQ8 1374 aa16.19■□□□□ 0.18
CACNA1D-228ENST00000638120 IRX6P78412 446 aaPredicted RBP16.19■□□□□ 0.18
CACNA1D-228ENST00000638120 MAP2P11137 1827 aaKnown RBP16.18■□□□□ 0.18
CACNA1D-228ENST00000638120 SSH2Q76I76 1423 aa16.18■□□□□ 0.18
CACNA1D-228ENST00000638120 RUNDC1Q96C34 613 aa16.18■□□□□ 0.18
CACNA1D-228ENST00000638120 TTC21BQ7Z4L5 1316 aa16.17■□□□□ 0.18
CACNA1D-228ENST00000638120 COG3Q96JB2 828 aa16.17■□□□□ 0.18
CACNA1D-228ENST00000638120 CDK12Q9NYV4 1490 aaPredicted RBP16.17■□□□□ 0.18
CACNA1D-228ENST00000638120 OVOS2A0A0J9YW53 1432 aa16.16■□□□□ 0.18
CACNA1D-228ENST00000638120 OVOS2Q6IE36 1432 aa16.16■□□□□ 0.18
CACNA1D-228ENST00000638120 GOLGA2Q08379 1002 aa16.16■□□□□ 0.18
CACNA1D-228ENST00000638120 POLKQ9UBT6 870 aa16.16■□□□□ 0.18
CACNA1D-228ENST00000638120 ZRANB1Q9UGI0 708 aa16.16■□□□□ 0.18
CACNA1D-228ENST00000638120 ADGRL3Q9HAR2 1447 aa16.16■□□□□ 0.18
CACNA1D-228ENST00000638120 U2AF1L5P0DN76 240 aaPredicted RBP16.15■□□□□ 0.18
CACNA1D-228ENST00000638120 U2AF1Q01081 240 aaKnown RBP eCLIP16.15■□□□□ 0.18
CACNA1D-228ENST00000638120 RCAN3Q9UKA8 241 aa16.15■□□□□ 0.18
CACNA1D-228ENST00000638120 DIAPH1O60610 1272 aaKnown RBP16.15■□□□□ 0.18
CACNA1D-228ENST00000638120 DUSP27Q5VZP5 1158 aa16.14■□□□□ 0.17
CACNA1D-228ENST00000638120 TTC21AQ8NDW8 1320 aa16.13■□□□□ 0.17
CACNA1D-228ENST00000638120 NCBP3Q53F19 620 aaKnown RBP16.13■□□□□ 0.17
CACNA1D-228ENST00000638120 SLFN5Q08AF3 891 aa16.12■□□□□ 0.17
CACNA1D-228ENST00000638120 TCP11L2Q8N4U5 519 aa16.12■□□□□ 0.17
CACNA1D-228ENST00000638120 U2SURPO15042 1029 aaKnown RBP16.12■□□□□ 0.17
CACNA1D-228ENST00000638120 FBLN1P23142 703 aa16.12■□□□□ 0.17
CACNA1D-228ENST00000638120 TRMT2AQ8IZ69 625 aaKnown RBP16.12■□□□□ 0.17
CACNA1D-228ENST00000638120 PMFBP1Q8TBY8 1022 aa16.12■□□□□ 0.17
CACNA1D-228ENST00000638120 NGDNQ8NEJ9 315 aaKnown RBP16.11■□□□□ 0.17
CACNA1D-228ENST00000638120 PHF23Q9BUL5 403 aaPredicted RBP16.11■□□□□ 0.17
CACNA1D-228ENST00000638120 EMILIN1Q9Y6C2 1016 aa16.11■□□□□ 0.17
CACNA1D-228ENST00000638120 PIK3C2AO00443 1686 aa16.11■□□□□ 0.17
CACNA1D-228ENST00000638120 USP31Q70CQ4 1352 aa16.1■□□□□ 0.17
CACNA1D-228ENST00000638120 RRP1P56182 461 aaKnown RBP16.1■□□□□ 0.17
CACNA1D-228ENST00000638120 WWC1Q8IX03 1113 aa16.1■□□□□ 0.17
CACNA1D-228ENST00000638120 LRRC7Q96NW7 1537 aa16.1■□□□□ 0.17
CACNA1D-228ENST00000638120 USP54Q70EL1 1684 aa16.1■□□□□ 0.17
CACNA1D-228ENST00000638120 E9PSI1 815 aa16.1■□□□□ 0.17
CACNA1D-228ENST00000638120 CCDC27Q2M243 656 aa16.1■□□□□ 0.17
CACNA1D-228ENST00000638120 PLEKHF1Q96S99 279 aa16.1■□□□□ 0.17
CACNA1D-228ENST00000638120 PPM1GO15355 546 aaPredicted RBP16.09■□□□□ 0.17
CACNA1D-228ENST00000638120 PPP4R2Q9NY27 417 aa16.09■□□□□ 0.17
CACNA1D-228ENST00000638120 PELP1Q8IZL8 1130 aaKnown RBP16.08■□□□□ 0.17
CACNA1D-228ENST00000638120 SPINK5Q9NQ38 1064 aaPredicted RBP16.08■□□□□ 0.17
CACNA1D-228ENST00000638120 RRP7AQ9Y3A4 280 aaKnown RBP16.08■□□□□ 0.16
CACNA1D-228ENST00000638120 DMRT2Q9Y5R5 561 aa16.08■□□□□ 0.16
CACNA1D-228ENST00000638120 RRS1Q15050 365 aaKnown RBP16.07■□□□□ 0.16
CACNA1D-228ENST00000638120 RBM33Q96EV2 1170 aaKnown RBP16.07■□□□□ 0.16
CACNA1D-228ENST00000638120 PNNQ9H307 717 aaKnown RBP16.07■□□□□ 0.16
CACNA1D-228ENST00000638120 NEUROD2Q15784 382 aa16.06■□□□□ 0.16
CACNA1D-228ENST00000638120 MAPK8IP3Q9UPT6 1336 aa16.06■□□□□ 0.16
CACNA1D-228ENST00000638120 PEAK1Q9H792 1746 aa16.06■□□□□ 0.16
CACNA1D-228ENST00000638120 MARF1Q9Y4F3 1742 aaKnown RBP16.06■□□□□ 0.16
CACNA1D-228ENST00000638120 FCHSD2O94868 740 aa16.05■□□□□ 0.16
CACNA1D-228ENST00000638120 IL13P35225 146 aa16.05■□□□□ 0.16
CACNA1D-228ENST00000638120 WDR63Q8IWG1 891 aa16.05■□□□□ 0.16
CACNA1D-228ENST00000638120 PHF8Q9UPP1 1060 aa16.05■□□□□ 0.16
CACNA1D-228ENST00000638120 RSPH6AQ9H0K4 717 aa16.04■□□□□ 0.16
CACNA1D-228ENST00000638120 TMPOP42166 694 aaKnown RBP16.03■□□□□ 0.16
CACNA1D-228ENST00000638120 STRCP1A6NGW2 1772 aa16.03■□□□□ 0.16
CACNA1D-228ENST00000638120 KDM4FA0A1W2PPD8 638 aa16.03■□□□□ 0.16
CACNA1D-228ENST00000638120 C14orf37Q86TY3 774 aa16.03■□□□□ 0.16
CACNA1D-228ENST00000638120 LMTK3Q96Q04 1460 aa16.02■□□□□ 0.16
CACNA1D-228ENST00000638120 PROSER2Q86WR7 435 aaPredicted RBP16.01■□□□□ 0.15
CACNA1D-228ENST00000638120 RGPD1P0DJD0 1748 aa16.01■□□□□ 0.15
CACNA1D-228ENST00000638120 PRKAR2BP31323 418 aa16.01■□□□□ 0.15
CACNA1D-228ENST00000638120 KIF1AQ12756 1690 aa16■□□□□ 0.15
CACNA1D-228ENST00000638120 HSPA2P54652 639 aa15.99■□□□□ 0.15
CACNA1D-228ENST00000638120 NCOA3Q9Y6Q9 1424 aa15.99■□□□□ 0.15
CACNA1D-228ENST00000638120 SBNO1A3KN83 1393 aa15.99■□□□□ 0.15
CACNA1D-228ENST00000638120 FLT4P35916 1363 aa15.99■□□□□ 0.15
CACNA1D-228ENST00000638120 MAP3K19Q56UN5 1328 aa15.99■□□□□ 0.15
CACNA1D-228ENST00000638120 HMOX1P09601 288 aa15.98■□□□□ 0.15
CACNA1D-228ENST00000638120 NLRP6P59044 892 aa15.98■□□□□ 0.15
CACNA1D-228ENST00000638120 EIF4A2Q14240 407 aaKnown RBP15.98■□□□□ 0.15
CACNA1D-228ENST00000638120 ESCO1Q5FWF5 840 aa15.98■□□□□ 0.15
CACNA1D-228ENST00000638120 TRIM35Q9UPQ4 493 aa15.98■□□□□ 0.15
CACNA1D-228ENST00000638120 NEFMP07197 916 aa15.98■□□□□ 0.15
CACNA1D-228ENST00000638120 DCCP43146 1447 aa15.98■□□□□ 0.15
CACNA1D-228ENST00000638120 STRCQ7RTU9 1775 aa15.97■□□□□ 0.15
CACNA1D-228ENST00000638120 RIPK4P57078 832 aa15.97■□□□□ 0.15
CACNA1D-228ENST00000638120 KIF24Q5T7B8 1368 aa15.97■□□□□ 0.15
CACNA1D-228ENST00000638120 C1orf167Q5SNV9 1468 aa15.97■□□□□ 0.15
CACNA1D-228ENST00000638120 IL16Q14005 1332 aa15.97■□□□□ 0.15
CACNA1D-228ENST00000638120 PLIN1O60240 522 aa15.96■□□□□ 0.15
CACNA1D-228ENST00000638120 B4GALNT3Q6L9W6 998 aa15.96■□□□□ 0.15
CACNA1D-228ENST00000638120 ABTB2Q8N961 1025 aa15.96■□□□□ 0.15
CACNA1D-228ENST00000638120 MYH16Q9H6N6 1097 aa15.96■□□□□ 0.15
CACNA1D-228ENST00000638120 C19orf44Q9H6X5 657 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms