RNA–Protein interactions for RNA: ENST00000637723.1

ARHGEF9-235, Transcript of Cdc42 guanine nucleotide exchange factor 9, humanhuman

TSL 5 BASIC

Gene ARHGEF9, Length 2,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9-235ENST00000637723 PRR36Q9H6K5 1346 aa17.44■□□□□ 0.38
ARHGEF9-235ENST00000637723 ADAMTSL3P82987 1691 aa17.44■□□□□ 0.38
ARHGEF9-235ENST00000637723 NUDT16Q96DE0 195 aaKnown RBP17.44■□□□□ 0.38
ARHGEF9-235ENST00000637723 PTCH1Q13635 1447 aa17.43■□□□□ 0.38
ARHGEF9-235ENST00000637723 E9PSI1 815 aa17.43■□□□□ 0.38
ARHGEF9-235ENST00000637723 CCDC136Q96JN2 1154 aa17.43■□□□□ 0.38
ARHGEF9-235ENST00000637723 PLIN1O60240 522 aa17.42■□□□□ 0.38
ARHGEF9-235ENST00000637723 TCP11L2Q8N4U5 519 aa17.42■□□□□ 0.38
ARHGEF9-235ENST00000637723 NCBP3Q53F19 620 aaKnown RBP17.42■□□□□ 0.38
ARHGEF9-235ENST00000637723 EID1Q9Y6B2 187 aa17.41■□□□□ 0.38
ARHGEF9-235ENST00000637723 CCDC61Q9Y6R9 512 aa17.41■□□□□ 0.38
ARHGEF9-235ENST00000637723 RGPD8O14715 1765 aaPredicted RBP17.41■□□□□ 0.38
ARHGEF9-235ENST00000637723 NCKAP5LQ9HCH0 1330 aa17.41■□□□□ 0.38
ARHGEF9-235ENST00000637723 CCDC27Q2M243 656 aa17.41■□□□□ 0.38
ARHGEF9-235ENST00000637723 SLC26A8Q96RN1 970 aa17.4■□□□□ 0.38
ARHGEF9-235ENST00000637723 NALCNQ8IZF0 1738 aa17.4■□□□□ 0.38
ARHGEF9-235ENST00000637723 U2AF1L5P0DN76 240 aaPredicted RBP17.39■□□□□ 0.38
ARHGEF9-235ENST00000637723 U2AF1Q01081 240 aaKnown RBP eCLIP17.39■□□□□ 0.38
ARHGEF9-235ENST00000637723 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.39■□□□□ 0.38
ARHGEF9-235ENST00000637723 ANP32EQ9BTT0 268 aa17.39■□□□□ 0.38
ARHGEF9-235ENST00000637723 TBX22Q9Y458 520 aa17.39■□□□□ 0.38
ARHGEF9-235ENST00000637723 RBM19Q9Y4C8 960 aaKnown RBP17.39■□□□□ 0.37
ARHGEF9-235ENST00000637723 THEMISQ8N1K5 641 aaPredicted RBP17.38■□□□□ 0.37
ARHGEF9-235ENST00000637723 PLEKHF1Q96S99 279 aa17.38■□□□□ 0.37
ARHGEF9-235ENST00000637723 RRP7AQ9Y3A4 280 aaKnown RBP17.38■□□□□ 0.37
ARHGEF9-235ENST00000637723 LRRC7Q96NW7 1537 aa17.38■□□□□ 0.37
ARHGEF9-235ENST00000637723 SETD1BQ9UPS6 1966 aaKnown RBP17.38■□□□□ 0.37
ARHGEF9-235ENST00000637723 C20orf194Q5TEA3 1177 aa17.37■□□□□ 0.37
ARHGEF9-235ENST00000637723 CDK12Q9NYV4 1490 aaPredicted RBP17.37■□□□□ 0.37
ARHGEF9-235ENST00000637723 PLPPR3Q6T4P5 718 aa17.36■□□□□ 0.37
ARHGEF9-235ENST00000637723 NME9Q86XW9 330 aa17.36■□□□□ 0.37
ARHGEF9-235ENST00000637723 POLKQ9UBT6 870 aa17.36■□□□□ 0.37
ARHGEF9-235ENST00000637723 AATKQ6ZMQ8 1374 aa17.36■□□□□ 0.37
ARHGEF9-235ENST00000637723 WDR63Q8IWG1 891 aa17.36■□□□□ 0.37
ARHGEF9-235ENST00000637723 CRBNQ96SW2 442 aa17.36■□□□□ 0.37
ARHGEF9-235ENST00000637723 CHD2O14647 1828 aaKnown RBP17.35■□□□□ 0.37
ARHGEF9-235ENST00000637723 NEUROD2Q15784 382 aa17.35■□□□□ 0.37
ARHGEF9-235ENST00000637723 AMOTL2Q9Y2J4 779 aa17.34■□□□□ 0.37
ARHGEF9-235ENST00000637723 DIAPH1O60610 1272 aaKnown RBP17.33■□□□□ 0.37
ARHGEF9-235ENST00000637723 FBLN1P23142 703 aa17.33■□□□□ 0.37
ARHGEF9-235ENST00000637723 ZRANB1Q9UGI0 708 aa17.33■□□□□ 0.36
ARHGEF9-235ENST00000637723 FMN2Q9NZ56 1722 aa17.32■□□□□ 0.36
ARHGEF9-235ENST00000637723 PLEKHG3A1L390 1219 aa17.32■□□□□ 0.36
ARHGEF9-235ENST00000637723 U2SURPO15042 1029 aaKnown RBP17.32■□□□□ 0.36
ARHGEF9-235ENST00000637723 ZNF692Q9BU19 519 aaPredicted RBP17.32■□□□□ 0.36
ARHGEF9-235ENST00000637723 OVOS2A0A0J9YW53 1432 aa17.32■□□□□ 0.36
ARHGEF9-235ENST00000637723 USP6P35125 1406 aa17.32■□□□□ 0.36
ARHGEF9-235ENST00000637723 OVOS2Q6IE36 1432 aa17.32■□□□□ 0.36
ARHGEF9-235ENST00000637723 SSH2Q76I76 1423 aa17.32■□□□□ 0.36
ARHGEF9-235ENST00000637723 DLG5Q8TDM6 1919 aa17.31■□□□□ 0.36
ARHGEF9-235ENST00000637723 PIK3R4Q99570 1358 aa17.31■□□□□ 0.36
ARHGEF9-235ENST00000637723 BCAR3O75815 825 aa17.3■□□□□ 0.36
ARHGEF9-235ENST00000637723 TMPOP42166 694 aaKnown RBP17.3■□□□□ 0.36
ARHGEF9-235ENST00000637723 EMILIN1Q9Y6C2 1016 aa17.3■□□□□ 0.36
ARHGEF9-235ENST00000637723 ACEP12821 1306 aa17.3■□□□□ 0.36
ARHGEF9-235ENST00000637723 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.29■□□□□ 0.36
ARHGEF9-235ENST00000637723 PEAK1Q9H792 1746 aa17.29■□□□□ 0.36
ARHGEF9-235ENST00000637723 TRIM35Q9UPQ4 493 aa17.29■□□□□ 0.36
ARHGEF9-235ENST00000637723 COG3Q96JB2 828 aa17.28■□□□□ 0.36
ARHGEF9-235ENST00000637723 MARF1Q9Y4F3 1742 aaKnown RBP17.28■□□□□ 0.36
ARHGEF9-235ENST00000637723 TTC21BQ7Z4L5 1316 aa17.27■□□□□ 0.36
ARHGEF9-235ENST00000637723 RSPH6AQ9H0K4 717 aa17.27■□□□□ 0.36
ARHGEF9-235ENST00000637723 FCHSD2O94868 740 aa17.27■□□□□ 0.35
ARHGEF9-235ENST00000637723 RGPD1P0DJD0 1748 aa17.26■□□□□ 0.35
ARHGEF9-235ENST00000637723 PIK3C2AO00443 1686 aa17.26■□□□□ 0.35
ARHGEF9-235ENST00000637723 USP54Q70EL1 1684 aa17.26■□□□□ 0.35
ARHGEF9-235ENST00000637723 MAPK8IP3Q9UPT6 1336 aa17.26■□□□□ 0.35
ARHGEF9-235ENST00000637723 IL13P35225 146 aa17.26■□□□□ 0.35
ARHGEF9-235ENST00000637723 ANKARQ7Z5J8 1434 aa17.25■□□□□ 0.35
ARHGEF9-235ENST00000637723 NUTM2FA1L443 756 aa17.24■□□□□ 0.35
ARHGEF9-235ENST00000637723 PPM1GO15355 546 aaPredicted RBP17.24■□□□□ 0.35
ARHGEF9-235ENST00000637723 KCNA6P17658 529 aa17.24■□□□□ 0.35
ARHGEF9-235ENST00000637723 MYH16Q9H6N6 1097 aa17.24■□□□□ 0.35
ARHGEF9-235ENST00000637723 USP31Q70CQ4 1352 aa17.24■□□□□ 0.35
ARHGEF9-235ENST00000637723 KDM2BQ8NHM5 1336 aa17.24■□□□□ 0.35
ARHGEF9-235ENST00000637723 RARSP54136 660 aaKnown RBP17.24■□□□□ 0.35
ARHGEF9-235ENST00000637723 PNNQ9H307 717 aaKnown RBP17.23■□□□□ 0.35
ARHGEF9-235ENST00000637723 IL16Q14005 1332 aa17.23■□□□□ 0.35
ARHGEF9-235ENST00000637723 FANCIQ9NVI1 1328 aa17.23■□□□□ 0.35
ARHGEF9-235ENST00000637723 RRS1Q15050 365 aaKnown RBP17.23■□□□□ 0.35
ARHGEF9-235ENST00000637723 PRKAR2BP31323 418 aa17.22■□□□□ 0.35
ARHGEF9-235ENST00000637723 PDE3AQ14432 1141 aa17.21■□□□□ 0.35
ARHGEF9-235ENST00000637723 RIPK4P57078 832 aa17.21■□□□□ 0.35
ARHGEF9-235ENST00000637723 TTC21AQ8NDW8 1320 aa17.2■□□□□ 0.34
ARHGEF9-235ENST00000637723 PHACTR3Q96KR7 559 aa17.2■□□□□ 0.34
ARHGEF9-235ENST00000637723 DNAJC5Q9H3Z4 198 aa17.2■□□□□ 0.34
ARHGEF9-235ENST00000637723 ANKLE2Q86XL3 938 aa17.19■□□□□ 0.34
ARHGEF9-235ENST00000637723 TSR2Q969E8 191 aaKnown RBP17.19■□□□□ 0.34
ARHGEF9-235ENST00000637723 CT47B1P0C2W7 299 aaPredicted RBP17.18■□□□□ 0.34
ARHGEF9-235ENST00000637723 HMOX1P09601 288 aa17.18■□□□□ 0.34
ARHGEF9-235ENST00000637723 PMFBP1Q8TBY8 1022 aa17.17■□□□□ 0.34
ARHGEF9-235ENST00000637723 NFE2L2Q16236 605 aa17.17■□□□□ 0.34
ARHGEF9-235ENST00000637723 NWD1Q149M9 1564 aa17.16■□□□□ 0.34
ARHGEF9-235ENST00000637723 TCERG1O14776 1098 aaKnown RBP17.15■□□□□ 0.34
ARHGEF9-235ENST00000637723 EXOSC9Q06265 439 aaKnown RBP17.15■□□□□ 0.34
ARHGEF9-235ENST00000637723 PANK1Q8TE04 598 aa17.15■□□□□ 0.34
ARHGEF9-235ENST00000637723 EIF4A2Q14240 407 aaKnown RBP17.14■□□□□ 0.33
ARHGEF9-235ENST00000637723 CENPQQ7L2Z9 268 aaPredicted RBP17.14■□□□□ 0.33
ARHGEF9-235ENST00000637723 NPHP4O75161 1426 aaPredicted RBP17.14■□□□□ 0.33
ARHGEF9-235ENST00000637723 BCL2L13Q9BXK5 485 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms