RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 TRIM44Q96DX7 344 aaPredicted RBP25.28■■□□□ 1.64
CACNA1A-243ENST00000637616 KIF2CQ99661 725 aa25.28■■□□□ 1.64
CACNA1A-243ENST00000637616 KIF1BO60333 1816 aa25.27■■□□□ 1.64
CACNA1A-243ENST00000637616 VWDEQ8N2E2 1590 aa25.27■■□□□ 1.64
CACNA1A-243ENST00000637616 EVC2Q86UK5 1308 aa25.27■■□□□ 1.64
CACNA1A-243ENST00000637616 CT47B1P0C2W7 299 aaPredicted RBP25.27■■□□□ 1.64
CACNA1A-243ENST00000637616 FBLN1P23142 703 aa25.26■■□□□ 1.63
CACNA1A-243ENST00000637616 HSP90AA2PQ14568 343 aaPredicted RBP25.26■■□□□ 1.63
CACNA1A-243ENST00000637616 FANCAO15360 1455 aa25.26■■□□□ 1.63
CACNA1A-243ENST00000637616 SRPK2P78362 688 aaKnown RBP25.26■■□□□ 1.63
CACNA1A-243ENST00000637616 SNX21Q969T3 373 aa25.26■■□□□ 1.63
CACNA1A-243ENST00000637616 NRXN1Q9ULB1 1477 aa25.25■■□□□ 1.63
CACNA1A-243ENST00000637616 ELL2O00472 640 aaPredicted RBP25.25■■□□□ 1.63
CACNA1A-243ENST00000637616 QRICH2Q9H0J4 1663 aa25.25■■□□□ 1.63
CACNA1A-243ENST00000637616 RAB3GAP1Q15042 981 aa25.24■■□□□ 1.63
CACNA1A-243ENST00000637616 GBP4Q96PP9 640 aa25.24■■□□□ 1.63
CACNA1A-243ENST00000637616 NCOA3Q9Y6Q9 1424 aa25.24■■□□□ 1.63
CACNA1A-243ENST00000637616 MYO3AQ8NEV4 1616 aa25.24■■□□□ 1.63
CACNA1A-243ENST00000637616 SSFA2P28290 1259 aa25.24■■□□□ 1.63
CACNA1A-243ENST00000637616 ANKRD36BQ8N2N9 1353 aa25.23■■□□□ 1.63
CACNA1A-243ENST00000637616 THUMPD2Q9BTF0 503 aaKnown RBP25.23■■□□□ 1.63
CACNA1A-243ENST00000637616 IPO8O15397 1037 aaKnown RBP25.23■■□□□ 1.63
CACNA1A-243ENST00000637616 MROH1Q8NDA8 1641 aa25.22■■□□□ 1.63
CACNA1A-243ENST00000637616 VSIG10Q8N0Z9 540 aa25.22■■□□□ 1.63
CACNA1A-243ENST00000637616 TBC1D9Q6ZT07 1266 aa25.21■■□□□ 1.63
CACNA1A-243ENST00000637616 GAS2L2Q8NHY3 880 aa25.21■■□□□ 1.63
CACNA1A-243ENST00000637616 ADGRL1O94910 1474 aa25.2■■□□□ 1.62
CACNA1A-243ENST00000637616 KIF16BQ96L93 1317 aa25.2■■□□□ 1.62
CACNA1A-243ENST00000637616 A0A1W2PP64 1363 aa25.19■■□□□ 1.62
CACNA1A-243ENST00000637616 EFCAB6Q5THR3 1501 aa25.19■■□□□ 1.62
CACNA1A-243ENST00000637616 BMP2KLQ5H9B9 411 aa25.19■■□□□ 1.62
CACNA1A-243ENST00000637616 IFT172Q9UG01 1749 aa25.19■■□□□ 1.62
CACNA1A-243ENST00000637616 ADGRB1O14514 1584 aa25.18■■□□□ 1.62
CACNA1A-243ENST00000637616 PPRC1Q5VV67 1664 aaKnown RBP25.18■■□□□ 1.62
CACNA1A-243ENST00000637616 FYB1O15117 783 aa25.18■■□□□ 1.62
CACNA1A-243ENST00000637616 ADGRB2O60241 1585 aa25.17■■□□□ 1.62
CACNA1A-243ENST00000637616 K7ELQ4 463 aaPredicted RBP25.17■■□□□ 1.62
CACNA1A-243ENST00000637616 ZBTB7BO15156 539 aaPredicted RBP25.16■■□□□ 1.62
CACNA1A-243ENST00000637616 TSPYL6Q8N831 410 aa25.16■■□□□ 1.62
CACNA1A-243ENST00000637616 CIZ1Q9ULV3 898 aaPredicted RBP25.16■■□□□ 1.62
CACNA1A-243ENST00000637616 INO80Q9ULG1 1556 aaPredicted RBP25.16■■□□□ 1.62
CACNA1A-243ENST00000637616 MINK1Q8N4C8 1332 aaPredicted RBP25.16■■□□□ 1.62
CACNA1A-243ENST00000637616 DIAPH1O60610 1272 aaKnown RBP25.16■■□□□ 1.62
CACNA1A-243ENST00000637616 NCBP3Q53F19 620 aaKnown RBP25.16■■□□□ 1.62
CACNA1A-243ENST00000637616 PPIP5K1Q6PFW1 1433 aa25.15■■□□□ 1.62
CACNA1A-243ENST00000637616 NEURL4Q96JN8 1562 aa25.15■■□□□ 1.62
CACNA1A-243ENST00000637616 TULP4Q9NRJ4 1543 aa25.15■■□□□ 1.62
CACNA1A-243ENST00000637616 ABCC11Q96J66 1382 aa25.15■■□□□ 1.62
CACNA1A-243ENST00000637616 SIRT2Q8IXJ6 389 aa25.14■■□□□ 1.62
CACNA1A-243ENST00000637616 SETBP1Q9Y6X0 1596 aa25.14■■□□□ 1.62
CACNA1A-243ENST00000637616 NPATQ14207 1427 aa25.14■■□□□ 1.61
CACNA1A-243ENST00000637616 ADGRB3O60242 1522 aa25.14■■□□□ 1.61
CACNA1A-243ENST00000637616 DDX49Q9Y6V7 483 aaKnown RBP25.14■■□□□ 1.61
CACNA1A-243ENST00000637616 HMOX1P09601 288 aa25.13■■□□□ 1.61
CACNA1A-243ENST00000637616 NCLP19338 710 aaKnown RBP25.13■■□□□ 1.61
CACNA1A-243ENST00000637616 PRKAR2BP31323 418 aa25.13■■□□□ 1.61
CACNA1A-243ENST00000637616 SKOR2Q2VWA4 1001 aaPredicted RBP25.13■■□□□ 1.61
CACNA1A-243ENST00000637616 GLIPR1L2Q4G1C9 344 aa25.13■■□□□ 1.61
CACNA1A-243ENST00000637616 ISY1Q9ULR0 285 aaKnown RBP25.13■■□□□ 1.61
CACNA1A-243ENST00000637616 NSD2O96028 1365 aa25.13■■□□□ 1.61
CACNA1A-243ENST00000637616 ZC3H13Q5T200 1668 aaKnown RBP25.12■■□□□ 1.61
CACNA1A-243ENST00000637616 IL16Q14005 1332 aa25.12■■□□□ 1.61
CACNA1A-243ENST00000637616 NASPP49321 788 aaPredicted RBP25.11■■□□□ 1.61
CACNA1A-243ENST00000637616 ATAD2Q6PL18 1390 aa25.11■■□□□ 1.61
CACNA1A-243ENST00000637616 PHACTR3Q96KR7 559 aa25.11■■□□□ 1.61
CACNA1A-243ENST00000637616 RRP9O43818 475 aaKnown RBP25.1■■□□□ 1.61
CACNA1A-243ENST00000637616 ALDH1L2Q3SY69 923 aa25.09■■□□□ 1.61
CACNA1A-243ENST00000637616 BAG4O95429 457 aaKnown RBP25.09■■□□□ 1.61
CACNA1A-243ENST00000637616 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.09■■□□□ 1.61
CACNA1A-243ENST00000637616 MCTP1Q6DN14 999 aa25.08■■□□□ 1.61
CACNA1A-243ENST00000637616 USP32Q8NFA0 1604 aa25.08■■□□□ 1.61
CACNA1A-243ENST00000637616 PKP1Q13835 747 aa25.08■■□□□ 1.6
CACNA1A-243ENST00000637616 ZMYND15Q9H091 742 aa25.08■■□□□ 1.6
CACNA1A-243ENST00000637616 VAMP4O75379 141 aa25.07■■□□□ 1.6
CACNA1A-243ENST00000637616 GCC1Q96CN9 775 aa25.07■■□□□ 1.6
CACNA1A-243ENST00000637616 C16orf71Q8IYS4 520 aaPredicted RBP25.07■■□□□ 1.6
CACNA1A-243ENST00000637616 MRPL50Q8N5N7 158 aaKnown RBP25.06■■□□□ 1.6
CACNA1A-243ENST00000637616 UHRF1BP1LA0JNW5 1464 aa25.06■■□□□ 1.6
CACNA1A-243ENST00000637616 COL3A1P02461 1466 aaPredicted RBP25.06■■□□□ 1.6
CACNA1A-243ENST00000637616 GSPT1P15170 499 aaKnown RBP25.06■■□□□ 1.6
CACNA1A-243ENST00000637616 GOLGA6L22H0YM25 854 aa25.06■■□□□ 1.6
CACNA1A-243ENST00000637616 VGFO15240 615 aaPredicted RBP25.06■■□□□ 1.6
CACNA1A-243ENST00000637616 CHAMP1Q96JM3 812 aa25.05■■□□□ 1.6
CACNA1A-243ENST00000637616 KIAA1211Q6ZU35 1233 aa25.05■■□□□ 1.6
CACNA1A-243ENST00000637616 AK9Q5TCS8 1911 aa25.05■■□□□ 1.6
CACNA1A-243ENST00000637616 APBB1O00213 710 aa25.04■■□□□ 1.6
CACNA1A-243ENST00000637616 CAVIN1Q6NZI2 390 aaKnown RBP25.04■■□□□ 1.6
CACNA1A-243ENST00000637616 GLI2P10070 1586 aa25.04■■□□□ 1.6
CACNA1A-243ENST00000637616 PKNOX2Q96KN3 472 aa25.04■■□□□ 1.6
CACNA1A-243ENST00000637616 PRAM1Q96QH2 718 aa25.04■■□□□ 1.6
CACNA1A-243ENST00000637616 TERF2IPQ9NYB0 399 aa25.03■■□□□ 1.6
CACNA1A-243ENST00000637616 PPLO60437 1756 aa25.03■■□□□ 1.6
CACNA1A-243ENST00000637616 CDC45O75419 566 aa25.03■■□□□ 1.6
CACNA1A-243ENST00000637616 CCDC173Q0VFZ6 552 aa25.02■■□□□ 1.6
CACNA1A-243ENST00000637616 CABP1Q9NZU7 370 aa25.02■■□□□ 1.6
CACNA1A-243ENST00000637616 ARAP3Q8WWN8 1544 aa25.02■■□□□ 1.6
CACNA1A-243ENST00000637616 RPGRIP1LQ68CZ1 1315 aa25.02■■□□□ 1.6
CACNA1A-243ENST00000637616 KLHL40Q2TBA0 621 aa25.01■■□□□ 1.6
CACNA1A-243ENST00000637616 OTUD7AQ8TE49 926 aaPredicted RBP25.01■■□□□ 1.59
CACNA1A-243ENST00000637616 PUS7Q96PZ0 661 aaKnown RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms