RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 ZRANB1Q9UGI0 708 aa24.54■■□□□ 1.52
CLN5-219ENST00000637537 AMOTL2Q9Y2J4 779 aa24.54■■□□□ 1.52
CLN5-219ENST00000637537 MED14O60244 1454 aa24.54■■□□□ 1.52
CLN5-219ENST00000637537 KIF20BQ96Q89 1820 aa24.54■■□□□ 1.52
CLN5-219ENST00000637537 PPM1GO15355 546 aaPredicted RBP24.53■■□□□ 1.52
CLN5-219ENST00000637537 PRKCSHP14314 528 aaPredicted RBP24.53■■□□□ 1.52
CLN5-219ENST00000637537 NME9Q86XW9 330 aa24.53■■□□□ 1.52
CLN5-219ENST00000637537 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.53■■□□□ 1.52
CLN5-219ENST00000637537 CPSF1Q10570 1443 aaKnown RBP24.53■■□□□ 1.52
CLN5-219ENST00000637537 TRMT2AQ8IZ69 625 aaKnown RBP24.51■■□□□ 1.51
CLN5-219ENST00000637537 RIMS1Q86UR5 1692 aaKnown RBP24.51■■□□□ 1.51
CLN5-219ENST00000637537 E9PSI1 815 aa24.48■■□□□ 1.51
CLN5-219ENST00000637537 C20orf194Q5TEA3 1177 aa24.48■■□□□ 1.51
CLN5-219ENST00000637537 TBX22Q9Y458 520 aa24.48■■□□□ 1.51
CLN5-219ENST00000637537 COL3A1P02461 1466 aaPredicted RBP24.48■■□□□ 1.51
CLN5-219ENST00000637537 IQSEC2Q5JU85 1478 aa24.48■■□□□ 1.51
CLN5-219ENST00000637537 EDC4Q6P2E9 1401 aaKnown RBP24.47■■□□□ 1.51
CLN5-219ENST00000637537 POLKQ9UBT6 870 aa24.46■■□□□ 1.51
CLN5-219ENST00000637537 CDC42BPGQ6DT37 1551 aa24.46■■□□□ 1.51
CLN5-219ENST00000637537 NGEFQ8N5V2 710 aa24.45■■□□□ 1.51
CLN5-219ENST00000637537 CEP170BQ9Y4F5 1589 aaPredicted RBP24.44■■□□□ 1.5
CLN5-219ENST00000637537 DIAPH1O60610 1272 aaKnown RBP24.44■■□□□ 1.5
CLN5-219ENST00000637537 EMILIN1Q9Y6C2 1016 aa24.44■■□□□ 1.5
CLN5-219ENST00000637537 NKTRP30414 1462 aaKnown RBP24.44■■□□□ 1.5
CLN5-219ENST00000637537 CRBNQ96SW2 442 aa24.43■■□□□ 1.5
CLN5-219ENST00000637537 DNAJC5Q9H3Z4 198 aa24.43■■□□□ 1.5
CLN5-219ENST00000637537 MAP2P11137 1827 aaKnown RBP24.42■■□□□ 1.5
CLN5-219ENST00000637537 PLEKHF1Q96S99 279 aa24.41■■□□□ 1.5
CLN5-219ENST00000637537 NOP58Q9Y2X3 529 aaKnown RBP24.41■■□□□ 1.5
CLN5-219ENST00000637537 PNPLA6Q8IY17 1366 aa24.41■■□□□ 1.5
CLN5-219ENST00000637537 ACEP12821 1306 aa24.41■■□□□ 1.5
CLN5-219ENST00000637537 PHF23Q9BUL5 403 aaPredicted RBP24.41■■□□□ 1.5
CLN5-219ENST00000637537 BCAR3O75815 825 aa24.4■■□□□ 1.5
CLN5-219ENST00000637537 MON2Q7Z3U7 1717 aa24.4■■□□□ 1.5
CLN5-219ENST00000637537 ADGRB2O60241 1585 aa24.4■■□□□ 1.5
CLN5-219ENST00000637537 KCNA6P17658 529 aa24.4■■□□□ 1.5
CLN5-219ENST00000637537 RRS1Q15050 365 aaKnown RBP24.4■■□□□ 1.5
CLN5-219ENST00000637537 COG3Q96JB2 828 aa24.39■■□□□ 1.5
CLN5-219ENST00000637537 ITSN1Q15811 1721 aa24.39■■□□□ 1.5
CLN5-219ENST00000637537 PMFBP1Q8TBY8 1022 aa24.39■■□□□ 1.49
CLN5-219ENST00000637537 ZNF692Q9BU19 519 aaPredicted RBP24.39■■□□□ 1.49
CLN5-219ENST00000637537 AKAP12Q02952 1782 aa24.39■■□□□ 1.49
CLN5-219ENST00000637537 PTCH1Q13635 1447 aa24.36■■□□□ 1.49
CLN5-219ENST00000637537 MAPK8IP3Q9UPT6 1336 aa24.35■■□□□ 1.49
CLN5-219ENST00000637537 TMPOP42166 694 aaKnown RBP24.35■■□□□ 1.49
CLN5-219ENST00000637537 CCDC27Q2M243 656 aa24.35■■□□□ 1.49
CLN5-219ENST00000637537 RBM33Q96EV2 1170 aaKnown RBP24.35■■□□□ 1.49
CLN5-219ENST00000637537 WDR63Q8IWG1 891 aa24.34■■□□□ 1.49
CLN5-219ENST00000637537 PLEKHG3A1L390 1219 aa24.34■■□□□ 1.49
CLN5-219ENST00000637537 HMOX1P09601 288 aa24.34■■□□□ 1.49
CLN5-219ENST00000637537 TTC21BQ7Z4L5 1316 aa24.34■■□□□ 1.49
CLN5-219ENST00000637537 TOPAZ1Q8N9V7 1692 aa24.33■■□□□ 1.49
CLN5-219ENST00000637537 ADAMTSL3P82987 1691 aa24.33■■□□□ 1.49
CLN5-219ENST00000637537 ANKLE2Q86XL3 938 aa24.33■■□□□ 1.49
CLN5-219ENST00000637537 DIP2AQ14689 1571 aa24.33■■□□□ 1.48
CLN5-219ENST00000637537 RGPD8O14715 1765 aaPredicted RBP24.32■■□□□ 1.48
CLN5-219ENST00000637537 PAK3O75914 559 aaPredicted RBP24.31■■□□□ 1.48
CLN5-219ENST00000637537 TRIM35Q9UPQ4 493 aa24.31■■□□□ 1.48
CLN5-219ENST00000637537 SOX12O15370 315 aa24.31■■□□□ 1.48
CLN5-219ENST00000637537 PRKAR2BP31323 418 aa24.3■■□□□ 1.48
CLN5-219ENST00000637537 USP6P35125 1406 aa24.3■■□□□ 1.48
CLN5-219ENST00000637537 XRN1Q8IZH2 1706 aaKnown RBP24.3■■□□□ 1.48
CLN5-219ENST00000637537 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.3■■□□□ 1.48
CLN5-219ENST00000637537 RIPK4P57078 832 aa24.29■■□□□ 1.48
CLN5-219ENST00000637537 TSR2Q969E8 191 aaKnown RBP24.29■■□□□ 1.48
CLN5-219ENST00000637537 RSPH6AQ9H0K4 717 aa24.28■■□□□ 1.48
CLN5-219ENST00000637537 AATKQ6ZMQ8 1374 aa24.28■■□□□ 1.48
CLN5-219ENST00000637537 LRRC7Q96NW7 1537 aa24.28■■□□□ 1.48
CLN5-219ENST00000637537 FCHSD2O94868 740 aa24.28■■□□□ 1.48
CLN5-219ENST00000637537 IL13P35225 146 aa24.28■■□□□ 1.48
CLN5-219ENST00000637537 NGDNQ8NEJ9 315 aaKnown RBP24.27■■□□□ 1.48
CLN5-219ENST00000637537 NRKQ7Z2Y5 1582 aa24.27■■□□□ 1.48
CLN5-219ENST00000637537 PHACTR3Q96KR7 559 aa24.27■■□□□ 1.48
CLN5-219ENST00000637537 BCL2L13Q9BXK5 485 aa24.27■■□□□ 1.48
CLN5-219ENST00000637537 NBR1Q14596 966 aa24.26■■□□□ 1.47
CLN5-219ENST00000637537 SETD1BQ9UPS6 1966 aaKnown RBP24.25■■□□□ 1.47
CLN5-219ENST00000637537 CDK12Q9NYV4 1490 aaPredicted RBP24.25■■□□□ 1.47
CLN5-219ENST00000637537 MYH16Q9H6N6 1097 aa24.24■■□□□ 1.47
CLN5-219ENST00000637537 FRAT1Q92837 279 aaPredicted RBP24.24■■□□□ 1.47
CLN5-219ENST00000637537 RARSP54136 660 aaKnown RBP24.23■■□□□ 1.47
CLN5-219ENST00000637537 ZNF142P52746 1687 aaPredicted RBP24.23■■□□□ 1.47
CLN5-219ENST00000637537 NCBP3Q53F19 620 aaKnown RBP24.23■■□□□ 1.47
CLN5-219ENST00000637537 PNNQ9H307 717 aaKnown RBP24.23■■□□□ 1.47
CLN5-219ENST00000637537 PIK3R4Q99570 1358 aa24.22■■□□□ 1.47
CLN5-219ENST00000637537 OVOS2A0A0J9YW53 1432 aa24.22■■□□□ 1.47
CLN5-219ENST00000637537 OVOS2Q6IE36 1432 aa24.22■■□□□ 1.47
CLN5-219ENST00000637537 CANXP27824 592 aaKnown RBP24.21■■□□□ 1.47
CLN5-219ENST00000637537 SSH2Q76I76 1423 aa24.21■■□□□ 1.47
CLN5-219ENST00000637537 SKAP1Q86WV1 359 aa24.2■■□□□ 1.46
CLN5-219ENST00000637537 NEFMP07197 916 aa24.19■■□□□ 1.46
CLN5-219ENST00000637537 PANK1Q8TE04 598 aa24.19■■□□□ 1.46
CLN5-219ENST00000637537 THUMPD2Q9BTF0 503 aaKnown RBP24.18■■□□□ 1.46
CLN5-219ENST00000637537 CHD2O14647 1828 aaKnown RBP24.18■■□□□ 1.46
CLN5-219ENST00000637537 EXOSC9Q06265 439 aaKnown RBP24.18■■□□□ 1.46
CLN5-219ENST00000637537 HSP90AB2PQ58FF8 381 aa24.18■■□□□ 1.46
CLN5-219ENST00000637537 NUTM2GQ5VZR2 741 aa24.18■■□□□ 1.46
CLN5-219ENST00000637537 IPO9Q96P70 1041 aaKnown RBP24.18■■□□□ 1.46
CLN5-219ENST00000637537 TNNQ9UQP3 1299 aa24.18■■□□□ 1.46
CLN5-219ENST00000637537 EIF4A2Q14240 407 aaKnown RBP24.17■■□□□ 1.46
CLN5-219ENST00000637537 AEBP1Q8IUX7 1158 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms