RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 PMFBP1Q8TBY8 1022 aa28.67■■■□□ 2.18
CHRNA7-228ENST00000637519 CHD2O14647 1828 aaKnown RBP28.66■■■□□ 2.18
CHRNA7-228ENST00000637519 RGPD8O14715 1765 aaPredicted RBP28.65■■■□□ 2.18
CHRNA7-228ENST00000637519 PPM1GO15355 546 aaPredicted RBP28.65■■■□□ 2.18
CHRNA7-228ENST00000637519 NRKQ7Z2Y5 1582 aa28.64■■■□□ 2.18
CHRNA7-228ENST00000637519 PLEKHG3A1L390 1219 aa28.64■■■□□ 2.18
CHRNA7-228ENST00000637519 U2AF1L5P0DN76 240 aaPredicted RBP28.64■■■□□ 2.18
CHRNA7-228ENST00000637519 U2AF1Q01081 240 aaKnown RBP eCLIP28.64■■■□□ 2.18
CHRNA7-228ENST00000637519 ZNF692Q9BU19 519 aaPredicted RBP28.63■■■□□ 2.17
CHRNA7-228ENST00000637519 RRP7AQ9Y3A4 280 aaKnown RBP28.62■■■□□ 2.17
CHRNA7-228ENST00000637519 USP6P35125 1406 aa28.62■■■□□ 2.17
CHRNA7-228ENST00000637519 U2SURPO15042 1029 aaKnown RBP28.62■■■□□ 2.17
CHRNA7-228ENST00000637519 POLKQ9UBT6 870 aa28.62■■■□□ 2.17
CHRNA7-228ENST00000637519 NALCNQ8IZF0 1738 aa28.61■■■□□ 2.17
CHRNA7-228ENST00000637519 TTC21BQ7Z4L5 1316 aa28.61■■■□□ 2.17
CHRNA7-228ENST00000637519 EMILIN1Q9Y6C2 1016 aa28.6■■■□□ 2.17
CHRNA7-228ENST00000637519 RNF123Q5XPI4 1314 aa28.6■■■□□ 2.17
CHRNA7-228ENST00000637519 NEUROD2Q15784 382 aa28.6■■■□□ 2.17
CHRNA7-228ENST00000637519 COG3Q96JB2 828 aa28.6■■■□□ 2.17
CHRNA7-228ENST00000637519 IQSEC2Q5JU85 1478 aa28.59■■■□□ 2.17
CHRNA7-228ENST00000637519 RUNDC1Q96C34 613 aa28.59■■■□□ 2.17
CHRNA7-228ENST00000637519 RCAN3Q9UKA8 241 aa28.59■■■□□ 2.17
CHRNA7-228ENST00000637519 DMRT2Q9Y5R5 561 aa28.59■■■□□ 2.17
CHRNA7-228ENST00000637519 SPINK5Q9NQ38 1064 aaPredicted RBP28.58■■■□□ 2.17
CHRNA7-228ENST00000637519 GOLGA2Q08379 1002 aa28.58■■■□□ 2.17
CHRNA7-228ENST00000637519 PNPLA6Q8IY17 1366 aa28.57■■■□□ 2.16
CHRNA7-228ENST00000637519 RRS1Q15050 365 aaKnown RBP28.57■■■□□ 2.16
CHRNA7-228ENST00000637519 TCP11L2Q8N4U5 519 aa28.57■■■□□ 2.16
CHRNA7-228ENST00000637519 FMN2Q9NZ56 1722 aa28.56■■■□□ 2.16
CHRNA7-228ENST00000637519 MAP2P11137 1827 aaKnown RBP28.56■■■□□ 2.16
CHRNA7-228ENST00000637519 DUSP27Q5VZP5 1158 aa28.55■■■□□ 2.16
CHRNA7-228ENST00000637519 NGDNQ8NEJ9 315 aaKnown RBP28.55■■■□□ 2.16
CHRNA7-228ENST00000637519 DIAPH1O60610 1272 aaKnown RBP28.54■■■□□ 2.16
CHRNA7-228ENST00000637519 SSH2Q76I76 1423 aa28.53■■■□□ 2.16
CHRNA7-228ENST00000637519 SLFN5Q08AF3 891 aa28.52■■■□□ 2.16
CHRNA7-228ENST00000637519 ANKARQ7Z5J8 1434 aa28.52■■■□□ 2.16
CHRNA7-228ENST00000637519 WWC1Q8IX03 1113 aa28.51■■■□□ 2.15
CHRNA7-228ENST00000637519 OVOS2A0A0J9YW53 1432 aa28.51■■■□□ 2.15
CHRNA7-228ENST00000637519 OVOS2Q6IE36 1432 aa28.51■■■□□ 2.15
CHRNA7-228ENST00000637519 AATKQ6ZMQ8 1374 aa28.5■■■□□ 2.15
CHRNA7-228ENST00000637519 RRP1P56182 461 aaKnown RBP28.5■■■□□ 2.15
CHRNA7-228ENST00000637519 HSPA2P54652 639 aa28.49■■■□□ 2.15
CHRNA7-228ENST00000637519 SOX12O15370 315 aa28.49■■■□□ 2.15
CHRNA7-228ENST00000637519 PLEKHF1Q96S99 279 aa28.48■■■□□ 2.15
CHRNA7-228ENST00000637519 ADGRL3Q9HAR2 1447 aa28.48■■■□□ 2.15
CHRNA7-228ENST00000637519 CDK12Q9NYV4 1490 aaPredicted RBP28.46■■■□□ 2.15
CHRNA7-228ENST00000637519 C14orf37Q86TY3 774 aa28.46■■■□□ 2.15
CHRNA7-228ENST00000637519 NWD1Q149M9 1564 aa28.45■■■□□ 2.14
CHRNA7-228ENST00000637519 TRMT2AQ8IZ69 625 aaKnown RBP28.44■■■□□ 2.14
CHRNA7-228ENST00000637519 KDM4FA0A1W2PPD8 638 aa28.43■■■□□ 2.14
CHRNA7-228ENST00000637519 PLIN1O60240 522 aa28.43■■■□□ 2.14
CHRNA7-228ENST00000637519 ERICH6BQ5W0A0 696 aa28.43■■■□□ 2.14
CHRNA7-228ENST00000637519 LRRC7Q96NW7 1537 aa28.43■■■□□ 2.14
CHRNA7-228ENST00000637519 NGEFQ8N5V2 710 aa28.42■■■□□ 2.14
CHRNA7-228ENST00000637519 PIK3C2AO00443 1686 aa28.42■■■□□ 2.14
CHRNA7-228ENST00000637519 PHF23Q9BUL5 403 aaPredicted RBP28.42■■■□□ 2.14
CHRNA7-228ENST00000637519 PPP4R2Q9NY27 417 aa28.42■■■□□ 2.14
CHRNA7-228ENST00000637519 E9PSI1 815 aa28.41■■■□□ 2.14
CHRNA7-228ENST00000637519 HMOX1P09601 288 aa28.41■■■□□ 2.14
CHRNA7-228ENST00000637519 TTC21AQ8NDW8 1320 aa28.41■■■□□ 2.14
CHRNA7-228ENST00000637519 B4GALNT3Q6L9W6 998 aa28.41■■■□□ 2.14
CHRNA7-228ENST00000637519 IL13P35225 146 aa28.4■■■□□ 2.14
CHRNA7-228ENST00000637519 NUTM2GQ5VZR2 741 aa28.4■■■□□ 2.14
CHRNA7-228ENST00000637519 MAPK8IP3Q9UPT6 1336 aa28.4■■■□□ 2.14
CHRNA7-228ENST00000637519 PHF8Q9UPP1 1060 aa28.39■■■□□ 2.13
CHRNA7-228ENST00000637519 PROSER2Q86WR7 435 aaPredicted RBP28.38■■■□□ 2.13
CHRNA7-228ENST00000637519 RSPH6AQ9H0K4 717 aa28.38■■■□□ 2.13
CHRNA7-228ENST00000637519 PRKAR2BP31323 418 aa28.38■■■□□ 2.13
CHRNA7-228ENST00000637519 USP31Q70CQ4 1352 aa28.37■■■□□ 2.13
CHRNA7-228ENST00000637519 ESCO1Q5FWF5 840 aa28.37■■■□□ 2.13
CHRNA7-228ENST00000637519 PEAK1Q9H792 1746 aa28.37■■■□□ 2.13
CHRNA7-228ENST00000637519 TMPOP42166 694 aaKnown RBP28.36■■■□□ 2.13
CHRNA7-228ENST00000637519 PAK3O75914 559 aaPredicted RBP28.36■■■□□ 2.13
CHRNA7-228ENST00000637519 CCDC27Q2M243 656 aa28.34■■■□□ 2.13
CHRNA7-228ENST00000637519 FCHSD2O94868 740 aa28.33■■■□□ 2.13
CHRNA7-228ENST00000637519 NLRP6P59044 892 aa28.33■■■□□ 2.13
CHRNA7-228ENST00000637519 ORAI2Q96SN7 254 aa28.32■■■□□ 2.12
CHRNA7-228ENST00000637519 TRIM35Q9UPQ4 493 aa28.32■■■□□ 2.12
CHRNA7-228ENST00000637519 MAP3K19Q56UN5 1328 aa28.32■■■□□ 2.12
CHRNA7-228ENST00000637519 EIF4A2Q14240 407 aaKnown RBP28.31■■■□□ 2.12
CHRNA7-228ENST00000637519 HSP90AB2PQ58FF8 381 aa28.31■■■□□ 2.12
CHRNA7-228ENST00000637519 EXOC6Q8TAG9 804 aa28.31■■■□□ 2.12
CHRNA7-228ENST00000637519 STRCP1A6NGW2 1772 aa28.31■■■□□ 2.12
CHRNA7-228ENST00000637519 WDR63Q8IWG1 891 aa28.31■■■□□ 2.12
CHRNA7-228ENST00000637519 PHACTR3Q96KR7 559 aa28.31■■■□□ 2.12
CHRNA7-228ENST00000637519 MARF1Q9Y4F3 1742 aaKnown RBP28.3■■■□□ 2.12
CHRNA7-228ENST00000637519 RIPK4P57078 832 aa28.3■■■□□ 2.12
CHRNA7-228ENST00000637519 ABTB2Q8N961 1025 aa28.3■■■□□ 2.12
CHRNA7-228ENST00000637519 LMTK3Q96Q04 1460 aa28.29■■■□□ 2.12
CHRNA7-228ENST00000637519 C20orf194Q5TEA3 1177 aa28.28■■■□□ 2.12
CHRNA7-228ENST00000637519 XPCQ01831 940 aaPredicted RBP28.27■■■□□ 2.12
CHRNA7-228ENST00000637519 PELP1Q8IZL8 1130 aaKnown RBP28.27■■■□□ 2.12
CHRNA7-228ENST00000637519 AEBP1Q8IUX7 1158 aa28.27■■■□□ 2.12
CHRNA7-228ENST00000637519 PNNQ9H307 717 aaKnown RBP28.27■■■□□ 2.12
CHRNA7-228ENST00000637519 TMEM94Q12767 1356 aa28.25■■■□□ 2.11
CHRNA7-228ENST00000637519 BCAR3O75815 825 aa28.25■■■□□ 2.11
CHRNA7-228ENST00000637519 PSME1Q06323 249 aa28.24■■■□□ 2.11
CHRNA7-228ENST00000637519 NCBP3Q53F19 620 aaKnown RBP28.24■■■□□ 2.11
CHRNA7-228ENST00000637519 FOXO3O43524 673 aa28.23■■■□□ 2.11
CHRNA7-228ENST00000637519 TSR2Q969E8 191 aaKnown RBP28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms