RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 DDX19BQ9UMR2 479 aa11.59□□□□□ -0.55
CACNA1A-242ENST00000637485 DAPK1P53355 1430 aa11.59□□□□□ -0.55
CACNA1A-242ENST00000637485 TTLL5Q6EMB2 1281 aa11.58□□□□□ -0.56
CACNA1A-242ENST00000637485 CLASRPQ8N2M8 674 aaKnown RBP11.58□□□□□ -0.56
CACNA1A-242ENST00000637485 GBP3Q9H0R5 595 aa11.58□□□□□ -0.56
CACNA1A-242ENST00000637485 LRRCC1Q9C099 1032 aa11.58□□□□□ -0.56
CACNA1A-242ENST00000637485 KIF2AO00139 706 aaPredicted RBP11.58□□□□□ -0.56
CACNA1A-242ENST00000637485 RILPL2Q969X0 211 aa11.58□□□□□ -0.56
CACNA1A-242ENST00000637485 KIAA0586Q9BVV6 1533 aa11.58□□□□□ -0.56
CACNA1A-242ENST00000637485 SCAPERQ9BY12 1400 aa11.58□□□□□ -0.56
CACNA1A-242ENST00000637485 VPS37CA5D8V6 355 aaPredicted RBP11.58□□□□□ -0.56
CACNA1A-242ENST00000637485 ROCK1Q13464 1354 aa11.57□□□□□ -0.56
CACNA1A-242ENST00000637485 MICALCLQ6ZW33 695 aa11.57□□□□□ -0.56
CACNA1A-242ENST00000637485 TICAM2Q86XR7 235 aa11.57□□□□□ -0.56
CACNA1A-242ENST00000637485 PLIN1O60240 522 aa11.57□□□□□ -0.56
CACNA1A-242ENST00000637485 INTS3Q68E01 1043 aaKnown RBP11.57□□□□□ -0.56
CACNA1A-242ENST00000637485 CCDC102AQ96A19 550 aa11.57□□□□□ -0.56
CACNA1A-242ENST00000637485 CYB5RLQ6IPT4 315 aa11.56□□□□□ -0.56
CACNA1A-242ENST00000637485 IQCEQ6IPM2 695 aa11.56□□□□□ -0.56
CACNA1A-242ENST00000637485 CTR9Q6PD62 1173 aa11.56□□□□□ -0.56
CACNA1A-242ENST00000637485 UBXN4Q92575 508 aa11.56□□□□□ -0.56
CACNA1A-242ENST00000637485 CT47A1Q5JQC4 288 aaPredicted RBP11.56□□□□□ -0.56
CACNA1A-242ENST00000637485 SYNE3Q6ZMZ3 975 aa11.56□□□□□ -0.56
CACNA1A-242ENST00000637485 IQGAP2Q13576 1575 aa11.56□□□□□ -0.56
CACNA1A-242ENST00000637485 EPRSP07814 1512 aaKnown RBP11.56□□□□□ -0.56
CACNA1A-242ENST00000637485 SMC2O95347 1197 aa11.56□□□□□ -0.56
CACNA1A-242ENST00000637485 API5Q9BZZ5 524 aaKnown RBP11.56□□□□□ -0.56
CACNA1A-242ENST00000637485 DYNC1I1O14576 645 aa11.55□□□□□ -0.56
CACNA1A-242ENST00000637485 ANKRD18AQ8IVF6 992 aa11.55□□□□□ -0.56
CACNA1A-242ENST00000637485 HSP90AB2PQ58FF8 381 aa11.55□□□□□ -0.56
CACNA1A-242ENST00000637485 PCF11O94913 1555 aaKnown RBP11.54□□□□□ -0.56
CACNA1A-242ENST00000637485 CCDC192P0DO97 292 aa11.54□□□□□ -0.56
CACNA1A-242ENST00000637485 LTV1Q96GA3 475 aaPredicted RBP11.54□□□□□ -0.56
CACNA1A-242ENST00000637485 COG6Q9Y2V7 657 aa11.54□□□□□ -0.56
CACNA1A-242ENST00000637485 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.54□□□□□ -0.56
CACNA1A-242ENST00000637485 RIPK4P57078 832 aa11.54□□□□□ -0.56
CACNA1A-242ENST00000637485 DZIP1LQ8IYY4 767 aaKnown RBP11.54□□□□□ -0.56
CACNA1A-242ENST00000637485 SDF4Q9BRK5 362 aa11.54□□□□□ -0.56
CACNA1A-242ENST00000637485 TNNT1P13805 278 aa11.54□□□□□ -0.56
CACNA1A-242ENST00000637485 NBPF1Q3BBV0 1214 aa11.54□□□□□ -0.56
CACNA1A-242ENST00000637485 FILIP1LQ4L180 1135 aa11.54□□□□□ -0.56
CACNA1A-242ENST00000637485 C1orf141Q5JVX7 400 aa11.54□□□□□ -0.56
CACNA1A-242ENST00000637485 GTPBP4Q9BZE4 634 aaKnown RBP11.54□□□□□ -0.56
CACNA1A-242ENST00000637485 PRPF40AO75400 957 aaKnown RBP11.54□□□□□ -0.56
CACNA1A-242ENST00000637485 RBM25P49756 843 aaKnown RBP11.54□□□□□ -0.56
CACNA1A-242ENST00000637485 SPC24Q8NBT2 197 aa11.54□□□□□ -0.56
CACNA1A-242ENST00000637485 DNAAF4Q8WXU2 420 aa11.54□□□□□ -0.56
CACNA1A-242ENST00000637485 RBM33Q96EV2 1170 aaKnown RBP11.54□□□□□ -0.56
CACNA1A-242ENST00000637485 ANO2Q9NQ90 1003 aa11.54□□□□□ -0.56
CACNA1A-242ENST00000637485 FBXO3Q9UK99 471 aa11.54□□□□□ -0.56
CACNA1A-242ENST00000637485 NUTM2FA1L443 756 aa11.53□□□□□ -0.56
CACNA1A-242ENST00000637485 EZRP15311 586 aaKnown RBP11.53□□□□□ -0.56
CACNA1A-242ENST00000637485 NF2P35240 595 aa11.53□□□□□ -0.56
CACNA1A-242ENST00000637485 BCL2L13Q9BXK5 485 aa11.53□□□□□ -0.56
CACNA1A-242ENST00000637485 CPLX1O14810 134 aa11.53□□□□□ -0.56
CACNA1A-242ENST00000637485 TOMM22Q9NS69 142 aa11.53□□□□□ -0.56
CACNA1A-242ENST00000637485 OFD1O75665 1012 aa11.53□□□□□ -0.56
CACNA1A-242ENST00000637485 MCM2P49736 904 aa11.53□□□□□ -0.56
CACNA1A-242ENST00000637485 ODF2Q5BJF6 829 aa11.53□□□□□ -0.56
CACNA1A-242ENST00000637485 FILIP1Q7Z7B0 1213 aa11.53□□□□□ -0.56
CACNA1A-242ENST00000637485 TXLNBQ8N3L3 684 aa11.53□□□□□ -0.56
CACNA1A-242ENST00000637485 MNAT1P51948 309 aa11.53□□□□□ -0.56
CACNA1A-242ENST00000637485 GNAI1P63096 354 aa11.53□□□□□ -0.56
CACNA1A-242ENST00000637485 FAM69CQ0P6D2 419 aa11.53□□□□□ -0.56
CACNA1A-242ENST00000637485 ENOX2Q16206 610 aaKnown RBP11.52□□□□□ -0.56
CACNA1A-242ENST00000637485 LRRFIP1Q32MZ4 808 aaKnown RBP11.52□□□□□ -0.56
CACNA1A-242ENST00000637485 FBXW7Q969H0 707 aa11.52□□□□□ -0.56
CACNA1A-242ENST00000637485 BIVM-ERCC5R4GMW8 1640 aa11.52□□□□□ -0.56
CACNA1A-242ENST00000637485 TDO2P48775 406 aa11.52□□□□□ -0.57
CACNA1A-242ENST00000637485 SLC26A8Q96RN1 970 aa11.52□□□□□ -0.57
CACNA1A-242ENST00000637485 ZNF330Q9Y3S2 320 aaPredicted RBP11.52□□□□□ -0.57
CACNA1A-242ENST00000637485 CWC22Q9HCG8 908 aaKnown RBP11.52□□□□□ -0.57
CACNA1A-242ENST00000637485 KINO60870 393 aaKnown RBP11.52□□□□□ -0.57
CACNA1A-242ENST00000637485 GTF2F1P35269 517 aaKnown RBP eCLIP11.52□□□□□ -0.57
CACNA1A-242ENST00000637485 PIP4K2AP48426 406 aaPredicted RBP11.52□□□□□ -0.57
CACNA1A-242ENST00000637485 KIAA1328Q86T90 577 aa11.52□□□□□ -0.57
CACNA1A-242ENST00000637485 TRERF1Q96PN7 1200 aa11.52□□□□□ -0.57
CACNA1A-242ENST00000637485 NOL10Q9BSC4 688 aaKnown RBP11.52□□□□□ -0.57
CACNA1A-242ENST00000637485 SPATA24Q86W54 205 aa11.51□□□□□ -0.57
CACNA1A-242ENST00000637485 AFAP1Q8N556 730 aa11.51□□□□□ -0.57
CACNA1A-242ENST00000637485 PAIP2Q9BPZ3 127 aaKnown RBP11.51□□□□□ -0.57
CACNA1A-242ENST00000637485 GOLGA6L10A0A0M3HER8 536 aa11.51□□□□□ -0.57
CACNA1A-242ENST00000637485 MCM5P33992 734 aa11.51□□□□□ -0.57
CACNA1A-242ENST00000637485 CRACR2AQ9BSW2 395 aa11.51□□□□□ -0.57
CACNA1A-242ENST00000637485 NAIPQ13075 1403 aa11.51□□□□□ -0.57
CACNA1A-242ENST00000637485 SEPT7Q16181 437 aaKnown RBP11.51□□□□□ -0.57
CACNA1A-242ENST00000637485 PPP4R3BQ5MIZ7 849 aa11.51□□□□□ -0.57
CACNA1A-242ENST00000637485 TEFQ10587 303 aa11.5□□□□□ -0.57
CACNA1A-242ENST00000637485 CIZ1Q9ULV3 898 aaPredicted RBP11.5□□□□□ -0.57
CACNA1A-242ENST00000637485 CCDC181Q5TID7 509 aa11.5□□□□□ -0.57
CACNA1A-242ENST00000637485 ELL2O00472 640 aaPredicted RBP11.5□□□□□ -0.57
CACNA1A-242ENST00000637485 MCM3P25205 808 aa11.5□□□□□ -0.57
CACNA1A-242ENST00000637485 MCM4P33991 863 aa11.49□□□□□ -0.57
CACNA1A-242ENST00000637485 MAP9Q49MG5 647 aa11.49□□□□□ -0.57
CACNA1A-242ENST00000637485 CDC45O75419 566 aa11.49□□□□□ -0.57
CACNA1A-242ENST00000637485 LUC7LQ9NQ29 371 aaKnown RBP11.49□□□□□ -0.57
CACNA1A-242ENST00000637485 CLGNO14967 610 aa11.49□□□□□ -0.57
CACNA1A-242ENST00000637485 CBFA2T2O43439 604 aa11.49□□□□□ -0.57
CACNA1A-242ENST00000637485 PPP2R1AP30153 589 aa11.49□□□□□ -0.57
CACNA1A-242ENST00000637485 LUZP1Q86V48 1076 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms