RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 THUMPD2Q9BTF0 503 aaKnown RBP19.18■□□□□ 0.66
CLN5-218ENST00000637397 BCL11BQ9C0K0 894 aaPredicted RBP19.18■□□□□ 0.66
CLN5-218ENST00000637397 MRC2Q9UBG0 1479 aa19.18■□□□□ 0.66
CLN5-218ENST00000637397 SULT6B1Q6IMI4 303 aa19.17■□□□□ 0.66
CLN5-218ENST00000637397 CDK19Q9BWU1 502 aa19.17■□□□□ 0.66
CLN5-218ENST00000637397 MAGI1Q96QZ7 1491 aaPredicted RBP19.17■□□□□ 0.66
CLN5-218ENST00000637397 FBXW7Q969H0 707 aa19.17■□□□□ 0.66
CLN5-218ENST00000637397 C8orf34Q49A92 452 aa19.16■□□□□ 0.66
CLN5-218ENST00000637397 GNAI2P04899 355 aa19.16■□□□□ 0.66
CLN5-218ENST00000637397 FOSBP53539 338 aa19.16■□□□□ 0.66
CLN5-218ENST00000637397 CCAR2Q8N163 923 aaKnown RBP19.16■□□□□ 0.66
CLN5-218ENST00000637397 TBC1D32Q96NH3 1257 aa19.15■□□□□ 0.66
CLN5-218ENST00000637397 FCHSD2O94868 740 aa19.15■□□□□ 0.66
CLN5-218ENST00000637397 TRIM27P14373 513 aa19.15■□□□□ 0.66
CLN5-218ENST00000637397 CNTROBQ8N137 903 aa19.15■□□□□ 0.66
CLN5-218ENST00000637397 MTERF4Q7Z6M4 381 aaKnown RBP19.14■□□□□ 0.65
CLN5-218ENST00000637397 NUTM2GQ5VZR2 741 aa19.14■□□□□ 0.65
CLN5-218ENST00000637397 CLASRPQ8N2M8 674 aaKnown RBP19.14■□□□□ 0.65
CLN5-218ENST00000637397 THOC2Q8NI27 1593 aaKnown RBP19.13■□□□□ 0.65
CLN5-218ENST00000637397 ZNF428Q96B54 188 aa19.13■□□□□ 0.65
CLN5-218ENST00000637397 CCDC30Q5VVM6 783 aa19.13■□□□□ 0.65
CLN5-218ENST00000637397 TNPO1Q92973 898 aaKnown RBP19.13■□□□□ 0.65
CLN5-218ENST00000637397 PARD3Q8TEW0 1356 aa19.12■□□□□ 0.65
CLN5-218ENST00000637397 CHMP4CQ96CF2 233 aa19.12■□□□□ 0.65
CLN5-218ENST00000637397 UGGT2Q9NYU1 1516 aa19.12■□□□□ 0.65
CLN5-218ENST00000637397 ZSCAN30Q86W11 494 aa19.12■□□□□ 0.65
CLN5-218ENST00000637397 HOMER1Q86YM7 354 aa19.12■□□□□ 0.65
CLN5-218ENST00000637397 PCDHB15Q9Y5E8 787 aa19.12■□□□□ 0.65
CLN5-218ENST00000637397 DDX58O95786 925 aaKnown RBP19.12■□□□□ 0.65
CLN5-218ENST00000637397 DHX29Q7Z478 1369 aaKnown RBP19.11■□□□□ 0.65
CLN5-218ENST00000637397 LRRCC1Q9C099 1032 aa19.11■□□□□ 0.65
CLN5-218ENST00000637397 ADGRF5Q8IZF2 1346 aa19.11■□□□□ 0.65
CLN5-218ENST00000637397 GPRASP1Q5JY77 1395 aa19.11■□□□□ 0.65
CLN5-218ENST00000637397 AIMP1Q12904 312 aaKnown RBP19.11■□□□□ 0.65
CLN5-218ENST00000637397 CCDC73Q6ZRK6 1079 aa19.11■□□□□ 0.65
CLN5-218ENST00000637397 TRIM5Q9C035 493 aa19.11■□□□□ 0.65
CLN5-218ENST00000637397 CPLX1O14810 134 aa19.11■□□□□ 0.65
CLN5-218ENST00000637397 RRP9O43818 475 aaKnown RBP19.1■□□□□ 0.65
CLN5-218ENST00000637397 RASSF8Q8NHQ8 419 aa19.1■□□□□ 0.65
CLN5-218ENST00000637397 SSFA2P28290 1259 aa19.1■□□□□ 0.65
CLN5-218ENST00000637397 NLRP6P59044 892 aa19.1■□□□□ 0.65
CLN5-218ENST00000637397 NFE2L2Q16236 605 aa19.1■□□□□ 0.65
CLN5-218ENST00000637397 TRHP20396 242 aaPredicted RBP19.1■□□□□ 0.65
CLN5-218ENST00000637397 SPC24Q8NBT2 197 aa19.1■□□□□ 0.65
CLN5-218ENST00000637397 LETM1O95202 739 aaPredicted RBP19.1■□□□□ 0.65
CLN5-218ENST00000637397 RRS1Q15050 365 aaKnown RBP19.1■□□□□ 0.65
CLN5-218ENST00000637397 RALGAPBQ86X10 1494 aa19.09■□□□□ 0.65
CLN5-218ENST00000637397 TXNDC2Q86VQ3 553 aa19.09■□□□□ 0.65
CLN5-218ENST00000637397 SYCE3A1L190 88 aa19.09■□□□□ 0.65
CLN5-218ENST00000637397 RPAP2Q8IXW5 612 aaPredicted RBP19.09■□□□□ 0.65
CLN5-218ENST00000637397 WDR33Q9C0J8 1336 aaKnown RBP19.09■□□□□ 0.65
CLN5-218ENST00000637397 HMGN5P82970 282 aaKnown RBP19.09■□□□□ 0.65
CLN5-218ENST00000637397 GOLGA6L1Q8N7Z2 621 aa19.08■□□□□ 0.65
CLN5-218ENST00000637397 CYB5RLQ6IPT4 315 aa19.08■□□□□ 0.65
CLN5-218ENST00000637397 CCT4P50991 539 aaKnown RBP19.08■□□□□ 0.64
CLN5-218ENST00000637397 MAP4K4O95819 1239 aaPredicted RBP19.08■□□□□ 0.64
CLN5-218ENST00000637397 TPM3P06753 285 aa19.08■□□□□ 0.64
CLN5-218ENST00000637397 CPLX2Q6PUV4 134 aaKnown RBP19.08■□□□□ 0.64
CLN5-218ENST00000637397 GAS2L2Q8NHY3 880 aa19.08■□□□□ 0.64
CLN5-218ENST00000637397 FSD1Q9BTV5 496 aa19.08■□□□□ 0.64
CLN5-218ENST00000637397 UQCRHLA0A096LP55 91 aa19.07■□□□□ 0.64
CLN5-218ENST00000637397 UQCRHP07919 91 aa19.07■□□□□ 0.64
CLN5-218ENST00000637397 DNAJC5BQ9UF47 199 aa19.07■□□□□ 0.64
CLN5-218ENST00000637397 PKNOX2Q96KN3 472 aa19.07■□□□□ 0.64
CLN5-218ENST00000637397 TTC5Q8N0Z6 440 aa19.07■□□□□ 0.64
CLN5-218ENST00000637397 PSMA5P28066 241 aa19.07■□□□□ 0.64
CLN5-218ENST00000637397 EXOC6BQ9Y2D4 811 aa19.06■□□□□ 0.64
CLN5-218ENST00000637397 PES1O00541 588 aaKnown RBP19.06■□□□□ 0.64
CLN5-218ENST00000637397 SMARCA5O60264 1052 aaPredicted RBP19.06■□□□□ 0.64
CLN5-218ENST00000637397 GPATCH8Q9UKJ3 1502 aaKnown RBP19.06■□□□□ 0.64
CLN5-218ENST00000637397 DCTN1Q14203 1278 aa19.06■□□□□ 0.64
CLN5-218ENST00000637397 ALDH1L2Q3SY69 923 aa19.06■□□□□ 0.64
CLN5-218ENST00000637397 SDF4Q9BRK5 362 aa19.06■□□□□ 0.64
CLN5-218ENST00000637397 IL1RAPL2Q9NP60 686 aa19.05■□□□□ 0.64
CLN5-218ENST00000637397 ATAD2Q6PL18 1390 aa19.05■□□□□ 0.64
CLN5-218ENST00000637397 RIC3Q7Z5B4 369 aa19.05■□□□□ 0.64
CLN5-218ENST00000637397 PDCP20941 246 aa19.05■□□□□ 0.64
CLN5-218ENST00000637397 HDGFL1Q5TGJ6 251 aa19.05■□□□□ 0.64
CLN5-218ENST00000637397 TPD52L1Q16890 204 aaPredicted RBP19.04■□□□□ 0.64
CLN5-218ENST00000637397 SCAF11Q99590 1463 aaKnown RBP19.04■□□□□ 0.64
CLN5-218ENST00000637397 RPGRIP1LQ68CZ1 1315 aa19.04■□□□□ 0.64
CLN5-218ENST00000637397 PLEKHH1Q9ULM0 1364 aa19.04■□□□□ 0.64
CLN5-218ENST00000637397 UPF3BQ9BZI7 483 aaKnown RBP19.04■□□□□ 0.64
CLN5-218ENST00000637397 NEUROD6Q96NK8 337 aa19.04■□□□□ 0.64
CLN5-218ENST00000637397 SLC52A1Q9NWF4 448 aa19.04■□□□□ 0.64
CLN5-218ENST00000637397 XRCC6P12956 609 aaKnown RBP eCLIP19.04■□□□□ 0.64
CLN5-218ENST00000637397 APPP05067 770 aa19.03■□□□□ 0.64
CLN5-218ENST00000637397 LRRFIP1Q32MZ4 808 aaKnown RBP19.03■□□□□ 0.64
CLN5-218ENST00000637397 TESK2Q96S53 571 aa19.03■□□□□ 0.64
CLN5-218ENST00000637397 PANK2Q9BZ23 570 aa19.03■□□□□ 0.64
CLN5-218ENST00000637397 URB2Q14146 1524 aaKnown RBP19.03■□□□□ 0.64
CLN5-218ENST00000637397 PER1O15534 1290 aaPredicted RBP19.03■□□□□ 0.64
CLN5-218ENST00000637397 SEC24BO95487 1268 aa19.03■□□□□ 0.64
CLN5-218ENST00000637397 PSME1Q06323 249 aa19.03■□□□□ 0.64
CLN5-218ENST00000637397 TBC1D9Q6ZT07 1266 aa19.02■□□□□ 0.64
CLN5-218ENST00000637397 TNNQ9UQP3 1299 aa19.02■□□□□ 0.64
CLN5-218ENST00000637397 TRIM29Q14134 588 aa19.02■□□□□ 0.63
CLN5-218ENST00000637397 BMP2KLQ5H9B9 411 aa19.02■□□□□ 0.63
CLN5-218ENST00000637397 CYP46A1Q9Y6A2 500 aa19.02■□□□□ 0.63
CLN5-218ENST00000637397 ABCC11Q96J66 1382 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms