RNA–Protein interactions for RNA: ENST00000636974.1

CACNA1A-233, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,783 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-233	ENST00000636974	ALK	Q9UM73	1620 aa		10.42	□□□□□ -0.74
CACNA1A-233	ENST00000636974	ANKRD26	Q9UPS8	1709 aa		10.41	□□□□□ -0.74
CACNA1A-233	ENST00000636974	CFAP65	Q6ZU64	1925 aa	Known RBP	10.41	□□□□□ -0.74
CACNA1A-233	ENST00000636974	SRPK2	P78362	688 aa	Known RBP	10.41	□□□□□ -0.74
CACNA1A-233	ENST00000636974	FAM161A	Q3B820	660 aa		10.41	□□□□□ -0.74
CACNA1A-233	ENST00000636974	ARHGEF40	Q8TER5	1519 aa		10.41	□□□□□ -0.74
CACNA1A-233	ENST00000636974	ATP7B	P35670	1465 aa		10.41	□□□□□ -0.74
CACNA1A-233	ENST00000636974	IL16	Q14005	1332 aa		10.4	□□□□□ -0.74
CACNA1A-233	ENST00000636974	MAPK8IP3	Q9UPT6	1336 aa		10.4	□□□□□ -0.74
CACNA1A-233	ENST00000636974	CABP2	Q9NPB3	220 aa		10.4	□□□□□ -0.74
CACNA1A-233	ENST00000636974	POGK	Q9P215	609 aa		10.4	□□□□□ -0.74
CACNA1A-233	ENST00000636974	NLRP1	Q9C000	1473 aa		10.4	□□□□□ -0.74
CACNA1A-233	ENST00000636974	A2ML1	A8K2U0	1454 aa		10.39	□□□□□ -0.75
CACNA1A-233	ENST00000636974	COL3A1	P02461	1466 aa	Predicted RBP	10.39	□□□□□ -0.75
CACNA1A-233	ENST00000636974	CANX	P27824	592 aa	Known RBP	10.39	□□□□□ -0.75
CACNA1A-233	ENST00000636974	FAM69C	Q0P6D2	419 aa		10.39	□□□□□ -0.75
CACNA1A-233	ENST00000636974	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	10.39	□□□□□ -0.75
CACNA1A-233	ENST00000636974	PMFBP1	Q8TBY8	1022 aa		10.39	□□□□□ -0.75
CACNA1A-233	ENST00000636974	CLUAP1	Q96AJ1	413 aa		10.39	□□□□□ -0.75
CACNA1A-233	ENST00000636974	USP35	Q9P2H5	1018 aa		10.39	□□□□□ -0.75
CACNA1A-233	ENST00000636974	PNPLA6	Q8IY17	1366 aa		10.39	□□□□□ -0.75
CACNA1A-233	ENST00000636974	CD163L1	Q9NR16	1453 aa		10.39	□□□□□ -0.75
CACNA1A-233	ENST00000636974	BCAR3	O75815	825 aa		10.39	□□□□□ -0.75
CACNA1A-233	ENST00000636974	RARS	P54136	660 aa	Known RBP	10.39	□□□□□ -0.75
CACNA1A-233	ENST00000636974	PRAM1	Q96QH2	718 aa		10.39	□□□□□ -0.75
CACNA1A-233	ENST00000636974	STAG3	Q9UJ98	1225 aa		10.39	□□□□□ -0.75
CACNA1A-233	ENST00000636974	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.38	□□□□□ -0.75
CACNA1A-233	ENST00000636974	HDGF	P51858	240 aa	Known RBP	10.38	□□□□□ -0.75
CACNA1A-233	ENST00000636974	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.38	□□□□□ -0.75
CACNA1A-233	ENST00000636974	CDC42BPG	Q6DT37	1551 aa		10.38	□□□□□ -0.75
CACNA1A-233	ENST00000636974	SIRT1	Q96EB6	747 aa		10.38	□□□□□ -0.75
CACNA1A-233	ENST00000636974	PPM1G	O15355	546 aa	Predicted RBP	10.37	□□□□□ -0.75
CACNA1A-233	ENST00000636974	TNNT2	P45379	298 aa	Predicted RBP	10.37	□□□□□ -0.75
CACNA1A-233	ENST00000636974	RIMS2	Q9UQ26	1411 aa		10.37	□□□□□ -0.75
CACNA1A-233	ENST00000636974	FYB1	O15117	783 aa		10.37	□□□□□ -0.75
CACNA1A-233	ENST00000636974	PAK3	O75914	559 aa	Predicted RBP	10.37	□□□□□ -0.75
CACNA1A-233	ENST00000636974	RTL5	Q5HYW3	569 aa	Predicted RBP	10.37	□□□□□ -0.75
CACNA1A-233	ENST00000636974	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.37	□□□□□ -0.75
CACNA1A-233	ENST00000636974	DMRT2	Q9Y5R5	561 aa		10.37	□□□□□ -0.75
CACNA1A-233	ENST00000636974	ZNF428	Q96B54	188 aa		10.36	□□□□□ -0.75
CACNA1A-233	ENST00000636974	STK26	Q9P289	416 aa		10.36	□□□□□ -0.75
CACNA1A-233	ENST00000636974	MYO5B	Q9ULV0	1848 aa		10.36	□□□□□ -0.75
CACNA1A-233	ENST00000636974	TECPR2	O15040	1411 aa		10.35	□□□□□ -0.75
CACNA1A-233	ENST00000636974	FAM135B	Q49AJ0	1406 aa		10.35	□□□□□ -0.75
CACNA1A-233	ENST00000636974	SPOCK2	Q92563	424 aa		10.35	□□□□□ -0.75
CACNA1A-233	ENST00000636974	PLEKHF1	Q96S99	279 aa		10.35	□□□□□ -0.75
CACNA1A-233	ENST00000636974	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.35	□□□□□ -0.75
CACNA1A-233	ENST00000636974	DIAPH1	O60610	1272 aa	Known RBP	10.34	□□□□□ -0.75
CACNA1A-233	ENST00000636974	FCHSD2	O94868	740 aa		10.34	□□□□□ -0.75
CACNA1A-233	ENST00000636974	C8orf34	Q49A92	452 aa		10.34	□□□□□ -0.75
CACNA1A-233	ENST00000636974	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.34	□□□□□ -0.75
CACNA1A-233	ENST00000636974	CDK19	Q9BWU1	502 aa		10.34	□□□□□ -0.75
CACNA1A-233	ENST00000636974	SETD1A	O15047	1707 aa	Known RBP	10.34	□□□□□ -0.75
CACNA1A-233	ENST00000636974	NEFM	P07197	916 aa		10.34	□□□□□ -0.75
CACNA1A-233	ENST00000636974	TMPO	P42166	694 aa	Known RBP	10.34	□□□□□ -0.75
CACNA1A-233	ENST00000636974	NEUROD2	Q15784	382 aa		10.34	□□□□□ -0.75
CACNA1A-233	ENST00000636974	EDC4	Q6P2E9	1401 aa	Known RBP	10.33	□□□□□ -0.76
CACNA1A-233	ENST00000636974	TRH	P20396	242 aa	Predicted RBP	10.33	□□□□□ -0.76
CACNA1A-233	ENST00000636974	CALD1	Q05682	793 aa	Known RBP	10.33	□□□□□ -0.76
CACNA1A-233	ENST00000636974	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.33	□□□□□ -0.76
CACNA1A-233	ENST00000636974	ZKSCAN2	Q63HK3	967 aa		10.33	□□□□□ -0.76
CACNA1A-233	ENST00000636974	GGNBP2	Q9H3C7	697 aa		10.33	□□□□□ -0.76
CACNA1A-233	ENST00000636974	RRP7A	Q9Y3A4	280 aa	Known RBP	10.33	□□□□□ -0.76
CACNA1A-233	ENST00000636974	KIF20B	Q96Q89	1820 aa		10.33	□□□□□ -0.76
CACNA1A-233	ENST00000636974	KNDC1	Q76NI1	1749 aa		10.33	□□□□□ -0.76
CACNA1A-233	ENST00000636974	AATK	Q6ZMQ8	1374 aa		10.32	□□□□□ -0.76
CACNA1A-233	ENST00000636974	HOXD11	P31277	338 aa	Predicted RBP	10.32	□□□□□ -0.76
CACNA1A-233	ENST00000636974	RWDD1	Q9H446	243 aa	Predicted RBP	10.32	□□□□□ -0.76
CACNA1A-233	ENST00000636974	COG6	Q9Y2V7	657 aa		10.32	□□□□□ -0.76
CACNA1A-233	ENST00000636974	CPSF1	Q10570	1443 aa	Known RBP	10.32	□□□□□ -0.76
CACNA1A-233	ENST00000636974	PPIP5K1	Q6PFW1	1433 aa		10.32	□□□□□ -0.76
CACNA1A-233	ENST00000636974	KIF16B	Q96L93	1317 aa		10.32	□□□□□ -0.76
CACNA1A-233	ENST00000636974	U2SURP	O15042	1029 aa	Known RBP	10.31	□□□□□ -0.76
CACNA1A-233	ENST00000636974	MVP	Q14764	893 aa	Known RBP	10.31	□□□□□ -0.76
CACNA1A-233	ENST00000636974	FRAT1	Q92837	279 aa	Predicted RBP	10.31	□□□□□ -0.76
CACNA1A-233	ENST00000636974	PANK1	Q8TE04	598 aa		10.31	□□□□□ -0.76
CACNA1A-233	ENST00000636974	CHMP4B	Q9H444	224 aa	Known RBP	10.31	□□□□□ -0.76
CACNA1A-233	ENST00000636974	ESF1	Q9H501	851 aa	Known RBP	10.31	□□□□□ -0.76
CACNA1A-233	ENST00000636974	CABP1	Q9NZU7	370 aa		10.31	□□□□□ -0.76
CACNA1A-233	ENST00000636974	CCDC9	Q9Y3X0	531 aa	Known RBP	10.31	□□□□□ -0.76
CACNA1A-233	ENST00000636974	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.31	□□□□□ -0.76
CACNA1A-233	ENST00000636974	CPS1	P31327	1500 aa		10.31	□□□□□ -0.76
CACNA1A-233	ENST00000636974	WASL	O00401	505 aa	Predicted RBP	10.3	□□□□□ -0.76
CACNA1A-233	ENST00000636974	IPO8	O15397	1037 aa	Known RBP	10.3	□□□□□ -0.76
CACNA1A-233	ENST00000636974	ALDH1L2	Q3SY69	923 aa		10.3	□□□□□ -0.76
CACNA1A-233	ENST00000636974	FTSJ3	Q8IY81	847 aa	Known RBP	10.3	□□□□□ -0.76
CACNA1A-233	ENST00000636974	DZIP1L	Q8IYY4	767 aa	Known RBP	10.3	□□□□□ -0.76
CACNA1A-233	ENST00000636974	DDX19B	Q9UMR2	479 aa		10.3	□□□□□ -0.76
CACNA1A-233	ENST00000636974	IGHD	P01880	384 aa		10.29	□□□□□ -0.76
CACNA1A-233	ENST00000636974	RGS3	P49796	1198 aa		10.29	□□□□□ -0.76
CACNA1A-233	ENST00000636974	TRIM35	Q9UPQ4	493 aa		10.29	□□□□□ -0.76
CACNA1A-233	ENST00000636974	NRXN3	Q9Y4C0	1643 aa		10.29	□□□□□ -0.76
CACNA1A-233	ENST00000636974	ZNF692	Q9BU19	519 aa	Predicted RBP	10.29	□□□□□ -0.76
CACNA1A-233	ENST00000636974	RIPK4	P57078	832 aa		10.28	□□□□□ -0.76
CACNA1A-233	ENST00000636974	LMOD3	Q0VAK6	560 aa		10.28	□□□□□ -0.76
CACNA1A-233	ENST00000636974	SMC4	Q9NTJ3	1288 aa		10.28	□□□□□ -0.76
CACNA1A-233	ENST00000636974	VIRMA	Q69YN4	1812 aa	Known RBP	10.28	□□□□□ -0.76
CACNA1A-233	ENST00000636974	HDAC1	Q13547	482 aa	Predicted RBP	10.27	□□□□□ -0.77
CACNA1A-233	ENST00000636974	ATF7IP	Q6VMQ6	1270 aa		10.27	□□□□□ -0.77
CACNA1A-233	ENST00000636974	UPF2	Q9HAU5	1272 aa	Known RBP	10.27	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms