RNA–Protein interactions for RNA: ENST00000636705.1

CLN5-214, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-214ENST00000636705 MCM6Q14566 821 aa5.73□□□□□ -1.49
CLN5-214ENST00000636705 MEX3CQ5U5Q3 659 aaKnown RBP5.73□□□□□ -1.49
CLN5-214ENST00000636705 FNBP4Q8N3X1 1017 aaPredicted RBP5.73□□□□□ -1.49
CLN5-214ENST00000636705 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.73□□□□□ -1.49
CLN5-214ENST00000636705 NEURL4Q96JN8 1562 aa5.72□□□□□ -1.49
CLN5-214ENST00000636705 POLR1AO95602 1720 aaPredicted RBP5.72□□□□□ -1.49
CLN5-214ENST00000636705 ZNF644Q9H582 1327 aaPredicted RBP5.72□□□□□ -1.49
CLN5-214ENST00000636705 POTEFA5A3E0 1075 aa5.72□□□□□ -1.49
CLN5-214ENST00000636705 PPP1R37O75864 691 aa5.72□□□□□ -1.49
CLN5-214ENST00000636705 SMYD5Q6GMV2 418 aa5.72□□□□□ -1.49
CLN5-214ENST00000636705 FAM177A1Q8N128 213 aaPredicted RBP5.72□□□□□ -1.49
CLN5-214ENST00000636705 SLAIN2Q9P270 581 aa5.72□□□□□ -1.49
CLN5-214ENST00000636705 COLQQ9Y215 455 aaPredicted RBP5.72□□□□□ -1.49
CLN5-214ENST00000636705 ERVK-7P63135 1459 aa5.71□□□□□ -1.49
CLN5-214ENST00000636705 IQGAP1P46940 1657 aa5.71□□□□□ -1.5
CLN5-214ENST00000636705 FGD6Q6ZV73 1430 aa5.71□□□□□ -1.5
CLN5-214ENST00000636705 ABCC3O15438 1527 aa5.71□□□□□ -1.5
CLN5-214ENST00000636705 RGS17Q9UGC6 210 aaPredicted RBP5.71□□□□□ -1.5
CLN5-214ENST00000636705 TMEM2Q9UHN6 1383 aa5.71□□□□□ -1.5
CLN5-214ENST00000636705 ARHGEF5Q12774 1597 aa5.71□□□□□ -1.5
CLN5-214ENST00000636705 SLIT1O75093 1534 aa5.71□□□□□ -1.5
CLN5-214ENST00000636705 RXRBP28702 533 aa5.7□□□□□ -1.5
CLN5-214ENST00000636705 CCDC97Q96F63 343 aaPredicted RBP5.7□□□□□ -1.5
CLN5-214ENST00000636705 ARHGAP23Q9P227 1491 aa5.7□□□□□ -1.5
CLN5-214ENST00000636705 ZC3H13Q5T200 1668 aaKnown RBP5.7□□□□□ -1.5
CLN5-214ENST00000636705 MYOM3Q5VTT5 1437 aa5.7□□□□□ -1.5
CLN5-214ENST00000636705 G3V3G9 751 aa5.7□□□□□ -1.5
CLN5-214ENST00000636705 SERPINA10Q9UK55 444 aa5.7□□□□□ -1.5
CLN5-214ENST00000636705 TMEM94Q12767 1356 aa5.7□□□□□ -1.5
CLN5-214ENST00000636705 NCOA2Q15596 1464 aa5.7□□□□□ -1.5
CLN5-214ENST00000636705 NKTRP30414 1462 aaKnown RBP5.69□□□□□ -1.5
CLN5-214ENST00000636705 CAMSAP2Q08AD1 1489 aa5.69□□□□□ -1.5
CLN5-214ENST00000636705 SLC34A2O95436 690 aa5.69□□□□□ -1.5
CLN5-214ENST00000636705 ATF3P18847 181 aa5.69□□□□□ -1.5
CLN5-214ENST00000636705 POTEAQ6S8J7 498 aa5.69□□□□□ -1.5
CLN5-214ENST00000636705 TMEM121BQ9BXQ6 578 aaPredicted RBP5.69□□□□□ -1.5
CLN5-214ENST00000636705 ERBINQ96RT1 1412 aa5.69□□□□□ -1.5
CLN5-214ENST00000636705 PPP1R15AO75807 674 aaPredicted RBP5.69□□□□□ -1.5
CLN5-214ENST00000636705 LTKP29376 864 aa5.69□□□□□ -1.5
CLN5-214ENST00000636705 DDRGK1Q96HY6 314 aa5.69□□□□□ -1.5
CLN5-214ENST00000636705 NGLY1Q96IV0 654 aa5.69□□□□□ -1.5
CLN5-214ENST00000636705 BOLA1Q9Y3E2 137 aa5.69□□□□□ -1.5
CLN5-214ENST00000636705 TBX22Q9Y458 520 aa5.69□□□□□ -1.5
CLN5-214ENST00000636705 DUOX2Q9NRD8 1548 aa5.69□□□□□ -1.5
CLN5-214ENST00000636705 PIK3R4Q99570 1358 aa5.68□□□□□ -1.5
CLN5-214ENST00000636705 EIF2AK4Q9P2K8 1649 aaKnown RBP5.68□□□□□ -1.5
CLN5-214ENST00000636705 PARP9Q8IXQ6 854 aa5.68□□□□□ -1.5
CLN5-214ENST00000636705 C19orf44Q9H6X5 657 aa5.68□□□□□ -1.5
CLN5-214ENST00000636705 IGSF5Q9NSI5 407 aa5.68□□□□□ -1.5
CLN5-214ENST00000636705 TIAM1Q13009 1591 aa5.68□□□□□ -1.5
CLN5-214ENST00000636705 DPY19L2Q6NUT2 758 aa5.68□□□□□ -1.5
CLN5-214ENST00000636705 CCDC125Q86Z20 511 aa5.68□□□□□ -1.5
CLN5-214ENST00000636705 CDK12Q9NYV4 1490 aaPredicted RBP5.68□□□□□ -1.5
CLN5-214ENST00000636705 MAST1Q9Y2H9 1570 aa5.67□□□□□ -1.5
CLN5-214ENST00000636705 UPF1Q92900 1129 aaKnown RBP eCLIP5.67□□□□□ -1.5
CLN5-214ENST00000636705 PLSCR2Q9NRY7 297 aa5.67□□□□□ -1.5
CLN5-214ENST00000636705 ANKRD30AQ9BXX3 1397 aa5.67□□□□□ -1.5
CLN5-214ENST00000636705 MAMSTRQ6ZN01 415 aa5.67□□□□□ -1.5
CLN5-214ENST00000636705 LRRC59Q96AG4 307 aaKnown RBP5.67□□□□□ -1.5
CLN5-214ENST00000636705 PRDM15P57071 1507 aaPredicted RBP5.67□□□□□ -1.5
CLN5-214ENST00000636705 IDI1Q13907 227 aa5.66□□□□□ -1.5
CLN5-214ENST00000636705 MICALL2Q8IY33 904 aa5.66□□□□□ -1.5
CLN5-214ENST00000636705 EFCAB6Q5THR3 1501 aa5.66□□□□□ -1.5
CLN5-214ENST00000636705 UNCXA6NJT0 531 aa5.66□□□□□ -1.5
CLN5-214ENST00000636705 GPR37O15354 613 aa5.66□□□□□ -1.5
CLN5-214ENST00000636705 ARIH1Q9Y4X5 557 aaPredicted RBP5.66□□□□□ -1.5
CLN5-214ENST00000636705 KIF15Q9NS87 1388 aa5.66□□□□□ -1.5
CLN5-214ENST00000636705 PLEKHG1Q9ULL1 1385 aa5.66□□□□□ -1.5
CLN5-214ENST00000636705 LRRIQ1Q96JM4 1722 aa5.65□□□□□ -1.5
CLN5-214ENST00000636705 MAP3K1Q13233 1512 aa5.65□□□□□ -1.5
CLN5-214ENST00000636705 RBM6P78332 1123 aaKnown RBP5.65□□□□□ -1.5
CLN5-214ENST00000636705 SLC26A8Q96RN1 970 aa5.65□□□□□ -1.5
CLN5-214ENST00000636705 ALKQ9UM73 1620 aa5.65□□□□□ -1.5
CLN5-214ENST00000636705 KDM5AP29375 1690 aaKnown RBP5.65□□□□□ -1.5
CLN5-214ENST00000636705 RPRD2Q5VT52 1461 aaKnown RBP5.64□□□□□ -1.51
CLN5-214ENST00000636705 LMTK2Q8IWU2 1503 aa5.64□□□□□ -1.51
CLN5-214ENST00000636705 CARNS1A5YM72 827 aa5.64□□□□□ -1.51
CLN5-214ENST00000636705 RRP7BPQ9NSQ0 103 aa5.64□□□□□ -1.51
CLN5-214ENST00000636705 DCCP43146 1447 aa5.63□□□□□ -1.51
CLN5-214ENST00000636705 CCDC102AQ96A19 550 aa5.63□□□□□ -1.51
CLN5-214ENST00000636705 TRIM52Q96A61 297 aa5.63□□□□□ -1.51
CLN5-214ENST00000636705 GOPCQ9HD26 462 aa5.63□□□□□ -1.51
CLN5-214ENST00000636705 ATAD2Q6PL18 1390 aa5.63□□□□□ -1.51
CLN5-214ENST00000636705 PDE4AP27815 886 aa5.63□□□□□ -1.51
CLN5-214ENST00000636705 C3orf67Q6ZVT6 689 aa5.63□□□□□ -1.51
CLN5-214ENST00000636705 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.63□□□□□ -1.51
CLN5-214ENST00000636705 UBR1Q8IWV7 1749 aa5.62□□□□□ -1.51
CLN5-214ENST00000636705 LARP6Q9BRS8 491 aaKnown RBP5.62□□□□□ -1.51
CLN5-214ENST00000636705 QTRT2Q9H974 415 aaKnown RBP5.62□□□□□ -1.51
CLN5-214ENST00000636705 SCUBE2Q9NQ36 999 aa5.62□□□□□ -1.51
CLN5-214ENST00000636705 NOS1P29475 1434 aa5.62□□□□□ -1.51
CLN5-214ENST00000636705 POTEB2H3BUK9 544 aa5.62□□□□□ -1.51
CLN5-214ENST00000636705 LHX8Q68G74 356 aa5.62□□□□□ -1.51
CLN5-214ENST00000636705 POLR3GLQ9BT43 218 aa5.62□□□□□ -1.51
CLN5-214ENST00000636705 VPS8Q8N3P4 1428 aa5.61□□□□□ -1.51
CLN5-214ENST00000636705 NUTM2BA6NNL0 878 aaPredicted RBP5.61□□□□□ -1.51
CLN5-214ENST00000636705 NUTM2EB1AL46 878 aaPredicted RBP5.61□□□□□ -1.51
CLN5-214ENST00000636705 NUTM2DQ5VT03 806 aaPredicted RBP5.61□□□□□ -1.51
CLN5-214ENST00000636705 NUTM2AQ8IVF1 878 aaPredicted RBP5.61□□□□□ -1.51
CLN5-214ENST00000636705 TRPC5Q9UL62 973 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms