RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 NUTM2FA1L443 756 aa17.76■□□□□ 0.43
CACNA1A-228ENST00000636610 EIF5BO60841 1220 aaKnown RBP17.76■□□□□ 0.43
CACNA1A-228ENST00000636610 IQSEC2Q5JU85 1478 aa17.76■□□□□ 0.43
CACNA1A-228ENST00000636610 TULP4Q9NRJ4 1543 aa17.76■□□□□ 0.43
CACNA1A-228ENST00000636610 NINLQ9Y2I6 1382 aa17.76■□□□□ 0.43
CACNA1A-228ENST00000636610 SOX12O15370 315 aa17.75■□□□□ 0.43
CACNA1A-228ENST00000636610 RPGRIP1LQ68CZ1 1315 aa17.75■□□□□ 0.43
CACNA1A-228ENST00000636610 EMILIN1Q9Y6C2 1016 aa17.75■□□□□ 0.43
CACNA1A-228ENST00000636610 OSCARQ8IYS5 282 aa17.74■□□□□ 0.43
CACNA1A-228ENST00000636610 TSPYL6Q8N831 410 aa17.74■□□□□ 0.43
CACNA1A-228ENST00000636610 POGZQ7Z3K3 1410 aa17.74■□□□□ 0.43
CACNA1A-228ENST00000636610 PRKCSHP14314 528 aaPredicted RBP17.74■□□□□ 0.43
CACNA1A-228ENST00000636610 DCTN1Q14203 1278 aa17.74■□□□□ 0.43
CACNA1A-228ENST00000636610 HDGFL2Q7Z4V5 671 aaPredicted RBP17.74■□□□□ 0.43
CACNA1A-228ENST00000636610 DDX19BQ9UMR2 479 aa17.74■□□□□ 0.43
CACNA1A-228ENST00000636610 ANKRD45Q5TZF3 282 aa17.72■□□□□ 0.43
CACNA1A-228ENST00000636610 RRS1Q15050 365 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-228ENST00000636610 ANTXR1Q9H6X2 564 aa17.72■□□□□ 0.43
CACNA1A-228ENST00000636610 NLRP1Q9C000 1473 aa17.72■□□□□ 0.43
CACNA1A-228ENST00000636610 FRMPD1Q5SYB0 1578 aa17.72■□□□□ 0.43
CACNA1A-228ENST00000636610 FAM83GA6ND36 823 aa17.72■□□□□ 0.43
CACNA1A-228ENST00000636610 GLI2P10070 1586 aa17.71■□□□□ 0.43
CACNA1A-228ENST00000636610 APBB1O00213 710 aa17.71■□□□□ 0.43
CACNA1A-228ENST00000636610 IFT172Q9UG01 1749 aa17.7■□□□□ 0.42
CACNA1A-228ENST00000636610 CYB5RLQ6IPT4 315 aa17.7■□□□□ 0.42
CACNA1A-228ENST00000636610 YEATS2Q9ULM3 1422 aa17.7■□□□□ 0.42
CACNA1A-228ENST00000636610 ABCC3O15438 1527 aa17.7■□□□□ 0.42
CACNA1A-228ENST00000636610 NME9Q86XW9 330 aa17.69■□□□□ 0.42
CACNA1A-228ENST00000636610 ZBTB40Q9NUA8 1239 aa17.69■□□□□ 0.42
CACNA1A-228ENST00000636610 ATAD2Q6PL18 1390 aa17.69■□□□□ 0.42
CACNA1A-228ENST00000636610 PLPPR3Q6T4P5 718 aa17.69■□□□□ 0.42
CACNA1A-228ENST00000636610 POLKQ9UBT6 870 aa17.69■□□□□ 0.42
CACNA1A-228ENST00000636610 ABCC11Q96J66 1382 aa17.69■□□□□ 0.42
CACNA1A-228ENST00000636610 PPLO60437 1756 aa17.68■□□□□ 0.42
CACNA1A-228ENST00000636610 SETBP1Q9Y6X0 1596 aa17.67■□□□□ 0.42
CACNA1A-228ENST00000636610 TXNDC2Q86VQ3 553 aa17.66■□□□□ 0.42
CACNA1A-228ENST00000636610 RBM42Q9BTD8 480 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-228ENST00000636610 CAMSAP1Q5T5Y3 1602 aa17.66■□□□□ 0.42
CACNA1A-228ENST00000636610 MYO3AQ8NEV4 1616 aa17.66■□□□□ 0.42
CACNA1A-228ENST00000636610 IPO8O15397 1037 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-228ENST00000636610 KRT24Q2M2I5 525 aa17.66■□□□□ 0.42
CACNA1A-228ENST00000636610 SLC52A1Q9NWF4 448 aa17.66■□□□□ 0.42
CACNA1A-228ENST00000636610 PANK2Q9BZ23 570 aa17.65■□□□□ 0.42
CACNA1A-228ENST00000636610 SIGLEC1Q9BZZ2 1709 aa17.65■□□□□ 0.42
CACNA1A-228ENST00000636610 LMTK2Q8IWU2 1503 aa17.65■□□□□ 0.42
CACNA1A-228ENST00000636610 HDAC1Q13547 482 aaPredicted RBP17.64■□□□□ 0.41
CACNA1A-228ENST00000636610 HSCBQ8IWL3 235 aa17.64■□□□□ 0.41
CACNA1A-228ENST00000636610 HSP90AA1P07900 732 aaKnown RBP17.64■□□□□ 0.41
CACNA1A-228ENST00000636610 CHD1LQ86WJ1 897 aa17.64■□□□□ 0.41
CACNA1A-228ENST00000636610 SMC5Q8IY18 1101 aa17.64■□□□□ 0.41
CACNA1A-228ENST00000636610 RSPH6AQ9H0K4 717 aa17.64■□□□□ 0.41
CACNA1A-228ENST00000636610 NSD2O96028 1365 aa17.63■□□□□ 0.41
CACNA1A-228ENST00000636610 MCM4P33991 863 aa17.63■□□□□ 0.41
CACNA1A-228ENST00000636610 AAMPQ13685 434 aa17.63■□□□□ 0.41
CACNA1A-228ENST00000636610 YTHDC2Q9H6S0 1430 aaKnown RBP17.63■□□□□ 0.41
CACNA1A-228ENST00000636610 MLH3Q9UHC1 1453 aa17.63■□□□□ 0.41
CACNA1A-228ENST00000636610 KIF16BQ96L93 1317 aa17.62■□□□□ 0.41
CACNA1A-228ENST00000636610 C8orf58Q8NAV2 365 aa17.62■□□□□ 0.41
CACNA1A-228ENST00000636610 NEXMIFQ5QGS0 1516 aa17.62■□□□□ 0.41
CACNA1A-228ENST00000636610 MBIPQ9NS73 344 aa17.62■□□□□ 0.41
CACNA1A-228ENST00000636610 FCHSD2O94868 740 aa17.61■□□□□ 0.41
CACNA1A-228ENST00000636610 VAMP4O75379 141 aa17.61■□□□□ 0.41
CACNA1A-228ENST00000636610 CD2BP2O95400 341 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-228ENST00000636610 NUCB1Q02818 461 aa17.61■□□□□ 0.41
CACNA1A-228ENST00000636610 HECW2Q9P2P5 1572 aa17.6■□□□□ 0.41
CACNA1A-228ENST00000636610 HSP90AB1P08238 724 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-228ENST00000636610 NEURL4Q96JN8 1562 aa17.6■□□□□ 0.41
CACNA1A-228ENST00000636610 ARHGEF28Q8N1W1 1705 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-228ENST00000636610 ZC3H13Q5T200 1668 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-228ENST00000636610 CT47B1P0C2W7 299 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-228ENST00000636610 AEBP1Q8IUX7 1158 aa17.59■□□□□ 0.41
CACNA1A-228ENST00000636610 TRAK2O60296 914 aa17.59■□□□□ 0.41
CACNA1A-228ENST00000636610 TWISTNBQ3B726 338 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-228ENST00000636610 ZBTB7BO15156 539 aaPredicted RBP17.58■□□□□ 0.41
CACNA1A-228ENST00000636610 NFE2L2Q16236 605 aa17.58■□□□□ 0.41
CACNA1A-228ENST00000636610 C16orf71Q8IYS4 520 aaPredicted RBP17.58■□□□□ 0.41
CACNA1A-228ENST00000636610 MIS18AQ9NYP9 233 aa17.58■□□□□ 0.41
CACNA1A-228ENST00000636610 CHMP5Q9NZZ3 219 aa17.58■□□□□ 0.41
CACNA1A-228ENST00000636610 CD163L1Q9NR16 1453 aa17.58■□□□□ 0.41
CACNA1A-228ENST00000636610 SIRT2Q8IXJ6 389 aa17.58■□□□□ 0.4
CACNA1A-228ENST00000636610 FAM69CQ0P6D2 419 aa17.58■□□□□ 0.4
CACNA1A-228ENST00000636610 XRCC6P12956 609 aaKnown RBP eCLIP17.57■□□□□ 0.4
CACNA1A-228ENST00000636610 PUS7Q96PZ0 661 aaKnown RBP17.57■□□□□ 0.4
CACNA1A-228ENST00000636610 MRPL50Q8N5N7 158 aaKnown RBP17.57■□□□□ 0.4
CACNA1A-228ENST00000636610 GOLGA6L3A6NEY3 463 aa17.56■□□□□ 0.4
CACNA1A-228ENST00000636610 PTPRMP28827 1452 aa17.56■□□□□ 0.4
CACNA1A-228ENST00000636610 MCM10Q7L590 875 aa17.56■□□□□ 0.4
CACNA1A-228ENST00000636610 PNNQ9H307 717 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-228ENST00000636610 COL3A1P02461 1466 aaPredicted RBP17.56■□□□□ 0.4
CACNA1A-228ENST00000636610 RRAGDQ9NQL2 400 aaPredicted RBP17.56■□□□□ 0.4
CACNA1A-228ENST00000636610 TBC1D9Q6ZT07 1266 aa17.55■□□□□ 0.4
CACNA1A-228ENST00000636610 MYO5BQ9ULV0 1848 aa17.55■□□□□ 0.4
CACNA1A-228ENST00000636610 PIK3C2BO00750 1634 aa17.55■□□□□ 0.4
CACNA1A-228ENST00000636610 OTUD7AQ8TE49 926 aaPredicted RBP17.55■□□□□ 0.4
CACNA1A-228ENST00000636610 IL16Q14005 1332 aa17.55■□□□□ 0.4
CACNA1A-228ENST00000636610 PPIP5K1Q6PFW1 1433 aa17.54■□□□□ 0.4
CACNA1A-228ENST00000636610 SMARCA5O60264 1052 aaPredicted RBP17.54■□□□□ 0.4
CACNA1A-228ENST00000636610 VIRMAQ69YN4 1812 aaKnown RBP17.54■□□□□ 0.4
CACNA1A-228ENST00000636610 COG3Q96JB2 828 aa17.53■□□□□ 0.4
CACNA1A-228ENST00000636610 ALDH1L2Q3SY69 923 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms