RNA–Protein interactions for RNA: ENST00000636405.1

CLN5-209, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 2,511 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-209ENST00000636405 SETD1AO15047 1707 aaKnown RBP19.42■□□□□ 0.7
CLN5-209ENST00000636405 PAK3O75914 559 aaPredicted RBP19.42■□□□□ 0.7
CLN5-209ENST00000636405 TMPOP42166 694 aaKnown RBP19.42■□□□□ 0.7
CLN5-209ENST00000636405 POLKQ9UBT6 870 aa19.42■□□□□ 0.7
CLN5-209ENST00000636405 CLUAP1Q96AJ1 413 aa19.42■□□□□ 0.7
CLN5-209ENST00000636405 EMILIN1Q9Y6C2 1016 aa19.42■□□□□ 0.7
CLN5-209ENST00000636405 TRIM35Q9UPQ4 493 aa19.41■□□□□ 0.7
CLN5-209ENST00000636405 PPIP5K1Q6PFW1 1433 aa19.41■□□□□ 0.7
CLN5-209ENST00000636405 COL3A1P02461 1466 aaPredicted RBP19.41■□□□□ 0.7
CLN5-209ENST00000636405 TMEM2Q9UHN6 1383 aa19.4■□□□□ 0.7
CLN5-209ENST00000636405 MAPK8IP3Q9UPT6 1336 aa19.4■□□□□ 0.7
CLN5-209ENST00000636405 CCDC27Q2M243 656 aa19.4■□□□□ 0.7
CLN5-209ENST00000636405 HMOX1P09601 288 aa19.4■□□□□ 0.7
CLN5-209ENST00000636405 BACH2Q9BYV9 841 aa19.4■□□□□ 0.7
CLN5-209ENST00000636405 DLC1Q96QB1 1528 aa19.39■□□□□ 0.7
CLN5-209ENST00000636405 IGHDP01880 384 aa19.39■□□□□ 0.69
CLN5-209ENST00000636405 RLBP1P12271 317 aa19.39■□□□□ 0.69
CLN5-209ENST00000636405 HDGFP51858 240 aaKnown RBP19.39■□□□□ 0.69
CLN5-209ENST00000636405 CENPQQ7L2Z9 268 aaPredicted RBP19.39■□□□□ 0.69
CLN5-209ENST00000636405 RGS3P49796 1198 aa19.39■□□□□ 0.69
CLN5-209ENST00000636405 RIPK4P57078 832 aa19.39■□□□□ 0.69
CLN5-209ENST00000636405 ANP32AP39687 249 aaKnown RBP19.38■□□□□ 0.69
CLN5-209ENST00000636405 ROBO2Q9HCK4 1378 aa19.38■□□□□ 0.69
CLN5-209ENST00000636405 PRR36Q9H6K5 1346 aa19.37■□□□□ 0.69
CLN5-209ENST00000636405 RRS1Q15050 365 aaKnown RBP19.37■□□□□ 0.69
CLN5-209ENST00000636405 EXOSC9Q06265 439 aaKnown RBP19.36■□□□□ 0.69
CLN5-209ENST00000636405 MYH16Q9H6N6 1097 aa19.36■□□□□ 0.69
CLN5-209ENST00000636405 CCDC61Q9Y6R9 512 aa19.36■□□□□ 0.69
CLN5-209ENST00000636405 MS4A1P11836 297 aa19.35■□□□□ 0.69
CLN5-209ENST00000636405 PRKAR2BP31323 418 aa19.35■□□□□ 0.69
CLN5-209ENST00000636405 PDE3AQ14432 1141 aa19.35■□□□□ 0.69
CLN5-209ENST00000636405 MED14O60244 1454 aa19.35■□□□□ 0.69
CLN5-209ENST00000636405 PNPLA6Q8IY17 1366 aa19.34■□□□□ 0.69
CLN5-209ENST00000636405 PHACTR3Q96KR7 559 aa19.34■□□□□ 0.69
CLN5-209ENST00000636405 NOP58Q9Y2X3 529 aaKnown RBP19.34■□□□□ 0.69
CLN5-209ENST00000636405 TRHP20396 242 aaPredicted RBP19.33■□□□□ 0.69
CLN5-209ENST00000636405 IPO9Q96P70 1041 aaKnown RBP19.33■□□□□ 0.69
CLN5-209ENST00000636405 CPSF1Q10570 1443 aaKnown RBP19.33■□□□□ 0.69
CLN5-209ENST00000636405 ATP7BP35670 1465 aa19.33■□□□□ 0.69
CLN5-209ENST00000636405 ADAMTS13Q76LX8 1427 aa19.33■□□□□ 0.68
CLN5-209ENST00000636405 THUMPD2Q9BTF0 503 aaKnown RBP19.32■□□□□ 0.68
CLN5-209ENST00000636405 LAS1LQ9Y4W2 734 aaKnown RBP19.32■□□□□ 0.68
CLN5-209ENST00000636405 ADGRB2O60241 1585 aa19.31■□□□□ 0.68
CLN5-209ENST00000636405 CPS1P31327 1500 aa19.31■□□□□ 0.68
CLN5-209ENST00000636405 RSPH6AQ9H0K4 717 aa19.31■□□□□ 0.68
CLN5-209ENST00000636405 ANKRD26Q9UPS8 1709 aa19.31■□□□□ 0.68
CLN5-209ENST00000636405 SOX12O15370 315 aa19.3■□□□□ 0.68
CLN5-209ENST00000636405 COG3Q96JB2 828 aa19.3■□□□□ 0.68
CLN5-209ENST00000636405 KIF20BQ96Q89 1820 aa19.3■□□□□ 0.68
CLN5-209ENST00000636405 UBR1Q8IWV7 1749 aa19.3■□□□□ 0.68
CLN5-209ENST00000636405 EDC4Q6P2E9 1401 aaKnown RBP19.3■□□□□ 0.68
CLN5-209ENST00000636405 FCHSD2O94868 740 aa19.29■□□□□ 0.68
CLN5-209ENST00000636405 FAM135BQ49AJ0 1406 aa19.29■□□□□ 0.68
CLN5-209ENST00000636405 SMC4Q9NTJ3 1288 aa19.28■□□□□ 0.68
CLN5-209ENST00000636405 PCDHB15Q9Y5E8 787 aa19.28■□□□□ 0.68
CLN5-209ENST00000636405 SSH1Q8WYL5 1049 aa19.28■□□□□ 0.68
CLN5-209ENST00000636405 IL13P35225 146 aa19.27■□□□□ 0.68
CLN5-209ENST00000636405 SIRT1Q96EB6 747 aa19.27■□□□□ 0.68
CLN5-209ENST00000636405 TECPR2O15040 1411 aa19.27■□□□□ 0.68
CLN5-209ENST00000636405 PTPRUQ92729 1446 aa19.27■□□□□ 0.68
CLN5-209ENST00000636405 ZBTB47Q9UFB7 747 aaPredicted RBP19.27■□□□□ 0.68
CLN5-209ENST00000636405 AMOTL2Q9Y2J4 779 aa19.27■□□□□ 0.68
CLN5-209ENST00000636405 EID1Q9Y6B2 187 aa19.27■□□□□ 0.68
CLN5-209ENST00000636405 ACEP12821 1306 aa19.27■□□□□ 0.67
CLN5-209ENST00000636405 PMFBP1Q8TBY8 1022 aa19.26■□□□□ 0.67
CLN5-209ENST00000636405 MYT1Q01538 1121 aa19.26■□□□□ 0.67
CLN5-209ENST00000636405 MAP2P11137 1827 aaKnown RBP19.26■□□□□ 0.67
CLN5-209ENST00000636405 LRRC7Q96NW7 1537 aa19.26■□□□□ 0.67
CLN5-209ENST00000636405 NCBP3Q53F19 620 aaKnown RBP19.25■□□□□ 0.67
CLN5-209ENST00000636405 PLEKHG1Q9ULL1 1385 aa19.24■□□□□ 0.67
CLN5-209ENST00000636405 ZKSCAN2Q63HK3 967 aa19.24■□□□□ 0.67
CLN5-209ENST00000636405 NEFMP07197 916 aa19.23■□□□□ 0.67
CLN5-209ENST00000636405 FTSJ3Q8IY81 847 aaKnown RBP19.23■□□□□ 0.67
CLN5-209ENST00000636405 PNNQ9H307 717 aaKnown RBP19.23■□□□□ 0.67
CLN5-209ENST00000636405 C8orf34Q49A92 452 aa19.23■□□□□ 0.67
CLN5-209ENST00000636405 NOB1Q9ULX3 412 aaKnown RBP19.23■□□□□ 0.67
CLN5-209ENST00000636405 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.22■□□□□ 0.67
CLN5-209ENST00000636405 CDC42BPGQ6DT37 1551 aa19.22■□□□□ 0.67
CLN5-209ENST00000636405 ELL2O00472 640 aaPredicted RBP19.22■□□□□ 0.67
CLN5-209ENST00000636405 NBR1Q14596 966 aa19.22■□□□□ 0.67
CLN5-209ENST00000636405 ZNF692Q9BU19 519 aaPredicted RBP19.22■□□□□ 0.67
CLN5-209ENST00000636405 TTC21BQ7Z4L5 1316 aa19.22■□□□□ 0.67
CLN5-209ENST00000636405 FAM83GA6ND36 823 aa19.22■□□□□ 0.67
CLN5-209ENST00000636405 TRIM27P14373 513 aa19.22■□□□□ 0.67
CLN5-209ENST00000636405 DZIP1LQ8IYY4 767 aaKnown RBP19.22■□□□□ 0.67
CLN5-209ENST00000636405 DCTN1Q14203 1278 aa19.21■□□□□ 0.67
CLN5-209ENST00000636405 NFE2L2Q16236 605 aa19.21■□□□□ 0.67
CLN5-209ENST00000636405 AEBP1Q8IUX7 1158 aa19.21■□□□□ 0.67
CLN5-209ENST00000636405 MVPQ14764 893 aaKnown RBP19.2■□□□□ 0.66
CLN5-209ENST00000636405 FAM161AQ3B820 660 aa19.2■□□□□ 0.66
CLN5-209ENST00000636405 TSPYL6Q8N831 410 aa19.19■□□□□ 0.66
CLN5-209ENST00000636405 IL16Q14005 1332 aa19.19■□□□□ 0.66
CLN5-209ENST00000636405 KNDC1Q76NI1 1749 aa19.19■□□□□ 0.66
CLN5-209ENST00000636405 ITPRIPQ8IWB1 547 aa19.18■□□□□ 0.66
CLN5-209ENST00000636405 RBM33Q96EV2 1170 aaKnown RBP19.18■□□□□ 0.66
CLN5-209ENST00000636405 AATKQ6ZMQ8 1374 aa19.17■□□□□ 0.66
CLN5-209ENST00000636405 HSP90AB2PQ58FF8 381 aa19.17■□□□□ 0.66
CLN5-209ENST00000636405 C3P01024 1663 aa19.17■□□□□ 0.66
CLN5-209ENST00000636405 EIF4A2Q14240 407 aaKnown RBP19.17■□□□□ 0.66
CLN5-209ENST00000636405 SLC4A3P48751 1232 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms