RNA–Protein interactions for RNA: ENST00000636340.1

GABRA1-213, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 2,239 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-213ENST00000636340 PPP2R1AP30153 589 aa8.19□□□□□ -1.1
GABRA1-213ENST00000636340 UPF1Q92900 1129 aaKnown RBP eCLIP8.19□□□□□ -1.1
GABRA1-213ENST00000636340 ABCC1P33527 1531 aa8.19□□□□□ -1.1
GABRA1-213ENST00000636340 SYNMO15061 1565 aa8.19□□□□□ -1.1
GABRA1-213ENST00000636340 PTPRTO14522 1441 aa8.18□□□□□ -1.1
GABRA1-213ENST00000636340 TRPM2O94759 1503 aa8.18□□□□□ -1.1
GABRA1-213ENST00000636340 GLI2P10070 1586 aa8.18□□□□□ -1.1
GABRA1-213ENST00000636340 C20orf194Q5TEA3 1177 aa8.18□□□□□ -1.1
GABRA1-213ENST00000636340 DUSP27Q5VZP5 1158 aa8.18□□□□□ -1.1
GABRA1-213ENST00000636340 PDCD7Q8N8D1 485 aaKnown RBP8.18□□□□□ -1.1
GABRA1-213ENST00000636340 CCDC102AQ96A19 550 aa8.18□□□□□ -1.1
GABRA1-213ENST00000636340 SCAPERQ9BY12 1400 aa8.18□□□□□ -1.1
GABRA1-213ENST00000636340 SPHKAPQ2M3C7 1700 aa8.18□□□□□ -1.1
GABRA1-213ENST00000636340 C2orf72A6NCS6 295 aa8.18□□□□□ -1.1
GABRA1-213ENST00000636340 PRIM1P49642 420 aaKnown RBP8.18□□□□□ -1.1
GABRA1-213ENST00000636340 NPM2Q86SE8 214 aaKnown RBP8.18□□□□□ -1.1
GABRA1-213ENST00000636340 SKAP1Q86WV1 359 aa8.18□□□□□ -1.1
GABRA1-213ENST00000636340 FANCAO15360 1455 aa8.17□□□□□ -1.1
GABRA1-213ENST00000636340 TRAPPC8Q9Y2L5 1435 aa8.17□□□□□ -1.1
GABRA1-213ENST00000636340 NPC1L1Q9UHC9 1359 aa8.17□□□□□ -1.1
GABRA1-213ENST00000636340 NUTM2FA1L443 756 aa8.17□□□□□ -1.1
GABRA1-213ENST00000636340 PARP9Q8IXQ6 854 aa8.17□□□□□ -1.1
GABRA1-213ENST00000636340 DDX12PQ92771 950 aa8.17□□□□□ -1.1
GABRA1-213ENST00000636340 MYOM1P52179 1685 aa8.17□□□□□ -1.1
GABRA1-213ENST00000636340 SCAF11Q99590 1463 aaKnown RBP8.17□□□□□ -1.1
GABRA1-213ENST00000636340 PIK3C2GO75747 1445 aa8.17□□□□□ -1.1
GABRA1-213ENST00000636340 RAPGEF3O95398 923 aa8.17□□□□□ -1.1
GABRA1-213ENST00000636340 ASXL1Q8IXJ9 1541 aa8.16□□□□□ -1.1
GABRA1-213ENST00000636340 CEP152O94986 1710 aa8.16□□□□□ -1.1
GABRA1-213ENST00000636340 FOXK1P85037 733 aa8.16□□□□□ -1.1
GABRA1-213ENST00000636340 RTL5Q5HYW3 569 aaPredicted RBP8.16□□□□□ -1.1
GABRA1-213ENST00000636340 PLPP6Q8IY26 295 aa8.16□□□□□ -1.1
GABRA1-213ENST00000636340 TRMT2AQ8IZ69 625 aaKnown RBP8.16□□□□□ -1.1
GABRA1-213ENST00000636340 DEPDC5O75140 1603 aa8.16□□□□□ -1.1
GABRA1-213ENST00000636340 CLTCL1P53675 1640 aa8.16□□□□□ -1.1
GABRA1-213ENST00000636340 AFAP1Q8N556 730 aa8.15□□□□□ -1.1
GABRA1-213ENST00000636340 STAC3Q96MF2 364 aa8.15□□□□□ -1.1
GABRA1-213ENST00000636340 KNSTRNQ9Y448 316 aa8.15□□□□□ -1.1
GABRA1-213ENST00000636340 RTEL1-TNFRSF6BF6WH68 1400 aa8.15□□□□□ -1.1
GABRA1-213ENST00000636340 EFCAB2Q5VUJ9 269 aa8.15□□□□□ -1.1
GABRA1-213ENST00000636340 ZMYND15Q9H091 742 aa8.15□□□□□ -1.1
GABRA1-213ENST00000636340 KIAA1210Q9ULL0 1709 aa8.14□□□□□ -1.11
GABRA1-213ENST00000636340 ZFYVE16Q7Z3T8 1539 aa8.14□□□□□ -1.11
GABRA1-213ENST00000636340 SLFN5Q08AF3 891 aa8.14□□□□□ -1.11
GABRA1-213ENST00000636340 CENPQQ7L2Z9 268 aaPredicted RBP8.14□□□□□ -1.11
GABRA1-213ENST00000636340 USP35Q9P2H5 1018 aa8.14□□□□□ -1.11
GABRA1-213ENST00000636340 VWDEQ8N2E2 1590 aa8.14□□□□□ -1.11
GABRA1-213ENST00000636340 NEURL4Q96JN8 1562 aa8.14□□□□□ -1.11
GABRA1-213ENST00000636340 ADGRL1O94910 1474 aa8.14□□□□□ -1.11
GABRA1-213ENST00000636340 WDR43Q15061 677 aaKnown RBP eCLIP8.14□□□□□ -1.11
GABRA1-213ENST00000636340 CDCA8Q53HL2 280 aa8.14□□□□□ -1.11
GABRA1-213ENST00000636340 TMEM92Q6UXU6 159 aa8.14□□□□□ -1.11
GABRA1-213ENST00000636340 ARAP3Q8WWN8 1544 aa8.14□□□□□ -1.11
GABRA1-213ENST00000636340 OSBPP22059 807 aa8.13□□□□□ -1.11
GABRA1-213ENST00000636340 TET3O43151 1660 aa8.13□□□□□ -1.11
GABRA1-213ENST00000636340 TMC2Q8TDI7 906 aa8.13□□□□□ -1.11
GABRA1-213ENST00000636340 REPIN1Q9BWE0 567 aaKnown RBP8.13□□□□□ -1.11
GABRA1-213ENST00000636340 PODXL2Q9NZ53 605 aa8.13□□□□□ -1.11
GABRA1-213ENST00000636340 LAS1LQ9Y4W2 734 aaKnown RBP8.13□□□□□ -1.11
GABRA1-213ENST00000636340 PPM1GO15355 546 aaPredicted RBP8.12□□□□□ -1.11
GABRA1-213ENST00000636340 NEFMP07197 916 aa8.12□□□□□ -1.11
GABRA1-213ENST00000636340 C8orf34Q49A92 452 aa8.12□□□□□ -1.11
GABRA1-213ENST00000636340 DDRGK1Q96HY6 314 aa8.12□□□□□ -1.11
GABRA1-213ENST00000636340 SPAG9O60271 1321 aaKnown RBP8.12□□□□□ -1.11
GABRA1-213ENST00000636340 TIE1P35590 1138 aa8.11□□□□□ -1.11
GABRA1-213ENST00000636340 EVX2Q03828 476 aa8.11□□□□□ -1.11
GABRA1-213ENST00000636340 KDM5AP29375 1690 aaKnown RBP8.11□□□□□ -1.11
GABRA1-213ENST00000636340 ERVK-7P63135 1459 aa8.11□□□□□ -1.11
GABRA1-213ENST00000636340 KIF3CO14782 793 aa8.11□□□□□ -1.11
GABRA1-213ENST00000636340 IRF6O14896 467 aa8.11□□□□□ -1.11
GABRA1-213ENST00000636340 FRMPD1Q5SYB0 1578 aa8.1□□□□□ -1.11
GABRA1-213ENST00000636340 INO80Q9ULG1 1556 aaPredicted RBP8.1□□□□□ -1.11
GABRA1-213ENST00000636340 MYOM2P54296 1465 aa8.1□□□□□ -1.11
GABRA1-213ENST00000636340 EIF3AQ14152 1382 aaKnown RBP8.1□□□□□ -1.11
GABRA1-213ENST00000636340 ATN1P54259 1190 aaPredicted RBP8.1□□□□□ -1.11
GABRA1-213ENST00000636340 NKTRP30414 1462 aaKnown RBP8.1□□□□□ -1.11
GABRA1-213ENST00000636340 RICTORQ6R327 1708 aa8.1□□□□□ -1.11
GABRA1-213ENST00000636340 ABCA6Q8N139 1617 aa8.1□□□□□ -1.11
GABRA1-213ENST00000636340 MROH1Q8NDA8 1641 aa8.1□□□□□ -1.11
GABRA1-213ENST00000636340 FAM161AQ3B820 660 aa8.1□□□□□ -1.11
GABRA1-213ENST00000636340 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.1□□□□□ -1.11
GABRA1-213ENST00000636340 CARD14Q9BXL6 1004 aa8.1□□□□□ -1.11
GABRA1-213ENST00000636340 MAP2K5Q13163 448 aa8.09□□□□□ -1.11
GABRA1-213ENST00000636340 CCDC146Q8IYE0 955 aa8.09□□□□□ -1.11
GABRA1-213ENST00000636340 NEO1Q92859 1461 aa8.09□□□□□ -1.11
GABRA1-213ENST00000636340 APAF1O14727 1248 aa8.09□□□□□ -1.12
GABRA1-213ENST00000636340 MAP3K9P80192 1104 aa8.09□□□□□ -1.12
GABRA1-213ENST00000636340 TTLL12Q14166 644 aaPredicted RBP8.09□□□□□ -1.12
GABRA1-213ENST00000636340 CFAP74Q9C0B2 1584 aa8.09□□□□□ -1.12
GABRA1-213ENST00000636340 IFT172Q9UG01 1749 aa8.09□□□□□ -1.12
GABRA1-213ENST00000636340 MYO3AQ8NEV4 1616 aa8.08□□□□□ -1.12
GABRA1-213ENST00000636340 NRXN1Q9ULB1 1477 aa8.08□□□□□ -1.12
GABRA1-213ENST00000636340 ATP7AQ04656 1500 aa8.08□□□□□ -1.12
GABRA1-213ENST00000636340 POGZQ7Z3K3 1410 aa8.08□□□□□ -1.12
GABRA1-213ENST00000636340 YEATS2Q9ULM3 1422 aa8.08□□□□□ -1.12
GABRA1-213ENST00000636340 C19orf67A6NJJ6 358 aa8.08□□□□□ -1.12
GABRA1-213ENST00000636340 RSPH6AQ9H0K4 717 aa8.08□□□□□ -1.12
GABRA1-213ENST00000636340 SPDYE16A6NNV3 312 aaPredicted RBP8.07□□□□□ -1.12
GABRA1-213ENST00000636340 E9PSI1 815 aa8.07□□□□□ -1.12
GABRA1-213ENST00000636340 BCAR3O75815 825 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms