RNA–Protein interactions for RNA: ENST00000636245.1

CHRNA7-211, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,794 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-211ENST00000636245 NALCNQ8IZF0 1738 aa23.2■■□□□ 1.3
CHRNA7-211ENST00000636245 CDCA7LQ96GN5 454 aa23.19■■□□□ 1.3
CHRNA7-211ENST00000636245 ZRANB1Q9UGI0 708 aa23.19■■□□□ 1.3
CHRNA7-211ENST00000636245 ZNF521Q96K83 1311 aa23.16■■□□□ 1.3
CHRNA7-211ENST00000636245 APAF1O14727 1248 aa23.16■■□□□ 1.3
CHRNA7-211ENST00000636245 FBLN1P23142 703 aa23.15■■□□□ 1.3
CHRNA7-211ENST00000636245 USP6P35125 1406 aa23.14■■□□□ 1.3
CHRNA7-211ENST00000636245 PNPLA6Q8IY17 1366 aa23.14■■□□□ 1.29
CHRNA7-211ENST00000636245 IRX6P78412 446 aaPredicted RBP23.14■■□□□ 1.29
CHRNA7-211ENST00000636245 TTC21BQ7Z4L5 1316 aa23.13■■□□□ 1.29
CHRNA7-211ENST00000636245 ANKARQ7Z5J8 1434 aa23.13■■□□□ 1.29
CHRNA7-211ENST00000636245 SSH2Q76I76 1423 aa23.12■■□□□ 1.29
CHRNA7-211ENST00000636245 POLKQ9UBT6 870 aa23.12■■□□□ 1.29
CHRNA7-211ENST00000636245 RNF123Q5XPI4 1314 aa23.12■■□□□ 1.29
CHRNA7-211ENST00000636245 NWD1Q149M9 1564 aa23.12■■□□□ 1.29
CHRNA7-211ENST00000636245 PMFBP1Q8TBY8 1022 aa23.12■■□□□ 1.29
CHRNA7-211ENST00000636245 RBM33Q96EV2 1170 aaKnown RBP23.11■■□□□ 1.29
CHRNA7-211ENST00000636245 RUNDC1Q96C34 613 aa23.1■■□□□ 1.29
CHRNA7-211ENST00000636245 COG3Q96JB2 828 aa23.09■■□□□ 1.29
CHRNA7-211ENST00000636245 IQSEC2Q5JU85 1478 aa23.09■■□□□ 1.29
CHRNA7-211ENST00000636245 AATKQ6ZMQ8 1374 aa23.09■■□□□ 1.29
CHRNA7-211ENST00000636245 U2AF1L5P0DN76 240 aaPredicted RBP23.08■■□□□ 1.29
CHRNA7-211ENST00000636245 U2AF1Q01081 240 aaKnown RBP eCLIP23.08■■□□□ 1.29
CHRNA7-211ENST00000636245 KDM4FA0A1W2PPD8 638 aa23.07■■□□□ 1.28
CHRNA7-211ENST00000636245 ADGRL3Q9HAR2 1447 aa23.07■■□□□ 1.28
CHRNA7-211ENST00000636245 NGEFQ8N5V2 710 aa23.06■■□□□ 1.28
CHRNA7-211ENST00000636245 OVOS2A0A0J9YW53 1432 aa23.05■■□□□ 1.28
CHRNA7-211ENST00000636245 OVOS2Q6IE36 1432 aa23.05■■□□□ 1.28
CHRNA7-211ENST00000636245 DIAPH1O60610 1272 aaKnown RBP23.05■■□□□ 1.28
CHRNA7-211ENST00000636245 GOLGA2Q08379 1002 aa23.05■■□□□ 1.28
CHRNA7-211ENST00000636245 EMILIN1Q9Y6C2 1016 aa23.05■■□□□ 1.28
CHRNA7-211ENST00000636245 TCP11L2Q8N4U5 519 aa23.04■■□□□ 1.28
CHRNA7-211ENST00000636245 NGDNQ8NEJ9 315 aaKnown RBP23.04■■□□□ 1.28
CHRNA7-211ENST00000636245 U2SURPO15042 1029 aaKnown RBP23.04■■□□□ 1.28
CHRNA7-211ENST00000636245 PPM1GO15355 546 aaPredicted RBP23.03■■□□□ 1.28
CHRNA7-211ENST00000636245 SLFN5Q08AF3 891 aa23.03■■□□□ 1.28
CHRNA7-211ENST00000636245 DUSP27Q5VZP5 1158 aa23.03■■□□□ 1.28
CHRNA7-211ENST00000636245 RCAN3Q9UKA8 241 aa23.03■■□□□ 1.28
CHRNA7-211ENST00000636245 CDK12Q9NYV4 1490 aaPredicted RBP23.02■■□□□ 1.28
CHRNA7-211ENST00000636245 TRMT2AQ8IZ69 625 aaKnown RBP23.02■■□□□ 1.28
CHRNA7-211ENST00000636245 TTC21AQ8NDW8 1320 aa23.02■■□□□ 1.28
CHRNA7-211ENST00000636245 PLEKHF1Q96S99 279 aa23.01■■□□□ 1.27
CHRNA7-211ENST00000636245 SPINK5Q9NQ38 1064 aaPredicted RBP23.01■■□□□ 1.27
CHRNA7-211ENST00000636245 DMRT2Q9Y5R5 561 aa23.01■■□□□ 1.27
CHRNA7-211ENST00000636245 PIK3C2AO00443 1686 aa23.01■■□□□ 1.27
CHRNA7-211ENST00000636245 STRCP1A6NGW2 1772 aa23.01■■□□□ 1.27
CHRNA7-211ENST00000636245 RRP7AQ9Y3A4 280 aaKnown RBP23.01■■□□□ 1.27
CHRNA7-211ENST00000636245 RRS1Q15050 365 aaKnown RBP23■■□□□ 1.27
CHRNA7-211ENST00000636245 ERICH6BQ5W0A0 696 aa23■■□□□ 1.27
CHRNA7-211ENST00000636245 WWC1Q8IX03 1113 aa23■■□□□ 1.27
CHRNA7-211ENST00000636245 PHF23Q9BUL5 403 aaPredicted RBP23■■□□□ 1.27
CHRNA7-211ENST00000636245 HSPA2P54652 639 aa22.99■■□□□ 1.27
CHRNA7-211ENST00000636245 USP31Q70CQ4 1352 aa22.99■■□□□ 1.27
CHRNA7-211ENST00000636245 MARF1Q9Y4F3 1742 aaKnown RBP22.99■■□□□ 1.27
CHRNA7-211ENST00000636245 NEUROD2Q15784 382 aa22.97■■□□□ 1.27
CHRNA7-211ENST00000636245 PEAK1Q9H792 1746 aa22.97■■□□□ 1.27
CHRNA7-211ENST00000636245 IL13P35225 146 aa22.96■■□□□ 1.27
CHRNA7-211ENST00000636245 PROSER2Q86WR7 435 aaPredicted RBP22.96■■□□□ 1.27
CHRNA7-211ENST00000636245 PHF8Q9UPP1 1060 aa22.96■■□□□ 1.27
CHRNA7-211ENST00000636245 NCBP3Q53F19 620 aaKnown RBP22.96■■□□□ 1.27
CHRNA7-211ENST00000636245 USP54Q70EL1 1684 aa22.95■■□□□ 1.27
CHRNA7-211ENST00000636245 CCDC27Q2M243 656 aa22.95■■□□□ 1.26
CHRNA7-211ENST00000636245 LRRC7Q96NW7 1537 aa22.95■■□□□ 1.26
CHRNA7-211ENST00000636245 RRP1P56182 461 aaKnown RBP22.94■■□□□ 1.26
CHRNA7-211ENST00000636245 C14orf37Q86TY3 774 aa22.94■■□□□ 1.26
CHRNA7-211ENST00000636245 LMTK3Q96Q04 1460 aa22.94■■□□□ 1.26
CHRNA7-211ENST00000636245 E9PSI1 815 aa22.94■■□□□ 1.26
CHRNA7-211ENST00000636245 STRCQ7RTU9 1775 aa22.93■■□□□ 1.26
CHRNA7-211ENST00000636245 FCHSD2O94868 740 aa22.92■■□□□ 1.26
CHRNA7-211ENST00000636245 RSPH6AQ9H0K4 717 aa22.92■■□□□ 1.26
CHRNA7-211ENST00000636245 TMPOP42166 694 aaKnown RBP22.91■■□□□ 1.26
CHRNA7-211ENST00000636245 ESCO1Q5FWF5 840 aa22.9■■□□□ 1.26
CHRNA7-211ENST00000636245 WDR63Q8IWG1 891 aa22.9■■□□□ 1.26
CHRNA7-211ENST00000636245 PPP4R2Q9NY27 417 aa22.9■■□□□ 1.26
CHRNA7-211ENST00000636245 PNNQ9H307 717 aaKnown RBP22.89■■□□□ 1.26
CHRNA7-211ENST00000636245 MAPK8IP3Q9UPT6 1336 aa22.89■■□□□ 1.25
CHRNA7-211ENST00000636245 SOX12O15370 315 aa22.87■■□□□ 1.25
CHRNA7-211ENST00000636245 HMOX1P09601 288 aa22.87■■□□□ 1.25
CHRNA7-211ENST00000636245 PRKAR2BP31323 418 aa22.87■■□□□ 1.25
CHRNA7-211ENST00000636245 NLRP6P59044 892 aa22.87■■□□□ 1.25
CHRNA7-211ENST00000636245 ORAI2Q96SN7 254 aa22.87■■□□□ 1.25
CHRNA7-211ENST00000636245 TRIM35Q9UPQ4 493 aa22.87■■□□□ 1.25
CHRNA7-211ENST00000636245 C19orf44Q9H6X5 657 aa22.86■■□□□ 1.25
CHRNA7-211ENST00000636245 MAP3K19Q56UN5 1328 aa22.86■■□□□ 1.25
CHRNA7-211ENST00000636245 EIF4A2Q14240 407 aaKnown RBP22.86■■□□□ 1.25
CHRNA7-211ENST00000636245 NUTM2GQ5VZR2 741 aa22.86■■□□□ 1.25
CHRNA7-211ENST00000636245 RGPD1P0DJD0 1748 aa22.86■■□□□ 1.25
CHRNA7-211ENST00000636245 PAK3O75914 559 aaPredicted RBP22.85■■□□□ 1.25
CHRNA7-211ENST00000636245 ABTB2Q8N961 1025 aa22.85■■□□□ 1.25
CHRNA7-211ENST00000636245 TMEM94Q12767 1356 aa22.85■■□□□ 1.25
CHRNA7-211ENST00000636245 HSP90AB2PQ58FF8 381 aa22.84■■□□□ 1.25
CHRNA7-211ENST00000636245 PHACTR3Q96KR7 559 aa22.84■■□□□ 1.25
CHRNA7-211ENST00000636245 XIRP1Q702N8 1843 aaKnown RBP22.84■■□□□ 1.25
CHRNA7-211ENST00000636245 C1orf167Q5SNV9 1468 aa22.83■■□□□ 1.25
CHRNA7-211ENST00000636245 PLIN1O60240 522 aa22.83■■□□□ 1.24
CHRNA7-211ENST00000636245 PSME1Q06323 249 aa22.83■■□□□ 1.24
CHRNA7-211ENST00000636245 RIPK4P57078 832 aa22.82■■□□□ 1.24
CHRNA7-211ENST00000636245 SBNO1A3KN83 1393 aa22.82■■□□□ 1.24
CHRNA7-211ENST00000636245 DLG5Q8TDM6 1919 aa22.82■■□□□ 1.24
CHRNA7-211ENST00000636245 NCOA3Q9Y6Q9 1424 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms