RNA–Protein interactions for RNA: ENST00000636135.1

SCN2A-210, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-210ENST00000636135 BCL11BQ9C0K0 894 aaPredicted RBP5.39□□□□□ -1.55
SCN2A-210ENST00000636135 KIAA1211Q6ZU35 1233 aa5.39□□□□□ -1.55
SCN2A-210ENST00000636135 CNKSR2Q8WXI2 1034 aa5.39□□□□□ -1.55
SCN2A-210ENST00000636135 KNDC1Q76NI1 1749 aa5.39□□□□□ -1.55
SCN2A-210ENST00000636135 CLTCQ00610 1675 aaKnown RBP5.39□□□□□ -1.55
SCN2A-210ENST00000636135 REC8O95072 547 aa5.39□□□□□ -1.55
SCN2A-210ENST00000636135 MIER1Q8N108 512 aa5.39□□□□□ -1.55
SCN2A-210ENST00000636135 PZPP20742 1482 aa5.39□□□□□ -1.55
SCN2A-210ENST00000636135 ZNF518AQ6AHZ1 1483 aa5.39□□□□□ -1.55
SCN2A-210ENST00000636135 CAMSAP1Q5T5Y3 1602 aa5.39□□□□□ -1.55
SCN2A-210ENST00000636135 KANK4Q5T7N3 995 aaPredicted RBP5.39□□□□□ -1.55
SCN2A-210ENST00000636135 EFCAB6Q5THR3 1501 aa5.39□□□□□ -1.55
SCN2A-210ENST00000636135 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.39□□□□□ -1.55
SCN2A-210ENST00000636135 ARHGEF40Q8TER5 1519 aa5.39□□□□□ -1.55
SCN2A-210ENST00000636135 ITSN1Q15811 1721 aa5.39□□□□□ -1.55
SCN2A-210ENST00000636135 RAD21O60216 631 aa5.39□□□□□ -1.55
SCN2A-210ENST00000636135 TMF1P82094 1093 aa5.39□□□□□ -1.55
SCN2A-210ENST00000636135 ERCC4Q92889 916 aaPredicted RBP5.39□□□□□ -1.55
SCN2A-210ENST00000636135 MCM5P33992 734 aa5.38□□□□□ -1.55
SCN2A-210ENST00000636135 NEUROD2Q15784 382 aa5.38□□□□□ -1.55
SCN2A-210ENST00000636135 CFDP1Q9UEE9 299 aaPredicted RBP5.38□□□□□ -1.55
SCN2A-210ENST00000636135 MAP3K4Q9Y6R4 1608 aa5.38□□□□□ -1.55
SCN2A-210ENST00000636135 MBD3O95983 291 aa5.38□□□□□ -1.55
SCN2A-210ENST00000636135 RNF20Q5VTR2 975 aa5.38□□□□□ -1.55
SCN2A-210ENST00000636135 NUCB2P80303 420 aa5.38□□□□□ -1.55
SCN2A-210ENST00000636135 GOLGA2Q08379 1002 aa5.38□□□□□ -1.55
SCN2A-210ENST00000636135 NAT10Q9H0A0 1025 aaKnown RBP5.38□□□□□ -1.55
SCN2A-210ENST00000636135 SPRYD3Q8NCJ5 442 aa5.38□□□□□ -1.55
SCN2A-210ENST00000636135 AEBP1Q8IUX7 1158 aa5.38□□□□□ -1.55
SCN2A-210ENST00000636135 PLCH2O75038 1416 aa5.38□□□□□ -1.55
SCN2A-210ENST00000636135 RDXP35241 583 aaKnown RBP5.38□□□□□ -1.55
SCN2A-210ENST00000636135 OS9Q13438 667 aaPredicted RBP5.38□□□□□ -1.55
SCN2A-210ENST00000636135 SYCP2Q9BX26 1530 aa5.37□□□□□ -1.55
SCN2A-210ENST00000636135 ADGRL1O94910 1474 aa5.37□□□□□ -1.55
SCN2A-210ENST00000636135 PDCP20941 246 aa5.37□□□□□ -1.55
SCN2A-210ENST00000636135 SAFB2Q14151 953 aaKnown RBP eCLIP5.37□□□□□ -1.55
SCN2A-210ENST00000636135 CTR9Q6PD62 1173 aa5.37□□□□□ -1.55
SCN2A-210ENST00000636135 NOC3LQ8WTT2 800 aaKnown RBP5.37□□□□□ -1.55
SCN2A-210ENST00000636135 CLTCL1P53675 1640 aa5.37□□□□□ -1.55
SCN2A-210ENST00000636135 ZNF428Q96B54 188 aa5.37□□□□□ -1.55
SCN2A-210ENST00000636135 ARID1BQ8NFD5 2236 aaPredicted RBP5.37□□□□□ -1.55
SCN2A-210ENST00000636135 CREBRFQ8IUR6 639 aa5.37□□□□□ -1.55
SCN2A-210ENST00000636135 PRRC2BQ5JSZ5 2229 aaKnown RBP5.37□□□□□ -1.55
SCN2A-210ENST00000636135 NSD2O96028 1365 aa5.37□□□□□ -1.55
SCN2A-210ENST00000636135 SBNO2Q9Y2G9 1366 aa5.37□□□□□ -1.55
SCN2A-210ENST00000636135 TSR1Q2NL82 804 aaKnown RBP5.37□□□□□ -1.55
SCN2A-210ENST00000636135 FAM43AQ8N2R8 423 aa5.37□□□□□ -1.55
SCN2A-210ENST00000636135 PUS7Q96PZ0 661 aaKnown RBP5.37□□□□□ -1.55
SCN2A-210ENST00000636135 PRG4Q92954 1404 aaPredicted RBP5.36□□□□□ -1.55
SCN2A-210ENST00000636135 COL17A1Q9UMD9 1497 aaPredicted RBP5.36□□□□□ -1.55
SCN2A-210ENST00000636135 KCNJ4P48050 445 aa5.36□□□□□ -1.55
SCN2A-210ENST00000636135 DRC7Q8IY82 874 aa5.36□□□□□ -1.55
SCN2A-210ENST00000636135 PCM1Q15154 2024 aa5.36□□□□□ -1.55
SCN2A-210ENST00000636135 TUBB4AP04350 444 aa5.36□□□□□ -1.55
SCN2A-210ENST00000636135 INCENPQ9NQS7 918 aa5.36□□□□□ -1.55
SCN2A-210ENST00000636135 MCM3P25205 808 aa5.36□□□□□ -1.55
SCN2A-210ENST00000636135 FBXW7Q969H0 707 aa5.36□□□□□ -1.55
SCN2A-210ENST00000636135 CIZ1Q9ULV3 898 aaPredicted RBP5.36□□□□□ -1.55
SCN2A-210ENST00000636135 ATP10BO94823 1461 aa5.36□□□□□ -1.55
SCN2A-210ENST00000636135 SPATA31E1Q6ZUB1 1445 aa5.36□□□□□ -1.55
SCN2A-210ENST00000636135 SMG6Q86US8 1419 aaKnown RBP5.36□□□□□ -1.55
SCN2A-210ENST00000636135 QRICH2Q9H0J4 1663 aa5.36□□□□□ -1.55
SCN2A-210ENST00000636135 PLEKHH1Q9ULM0 1364 aa5.36□□□□□ -1.55
SCN2A-210ENST00000636135 HMGB2P26583 209 aaKnown RBP5.36□□□□□ -1.55
SCN2A-210ENST00000636135 FAM161AQ3B820 660 aa5.36□□□□□ -1.55
SCN2A-210ENST00000636135 MEX3CQ5U5Q3 659 aaKnown RBP5.36□□□□□ -1.55
SCN2A-210ENST00000636135 ANKRD20A12PQ8NF67 263 aa5.36□□□□□ -1.55
SCN2A-210ENST00000636135 RGS3P49796 1198 aa5.36□□□□□ -1.55
SCN2A-210ENST00000636135 MRE11P49959 708 aa5.36□□□□□ -1.55
SCN2A-210ENST00000636135 PIK3C2BO00750 1634 aa5.36□□□□□ -1.55
SCN2A-210ENST00000636135 IQCEQ6IPM2 695 aa5.35□□□□□ -1.55
SCN2A-210ENST00000636135 G3V3G9 751 aa5.35□□□□□ -1.55
SCN2A-210ENST00000636135 IPO7O95373 1038 aaKnown RBP5.35□□□□□ -1.55
SCN2A-210ENST00000636135 DCAF8Q5TAQ9 597 aa5.35□□□□□ -1.55
SCN2A-210ENST00000636135 RCAN3Q9UKA8 241 aa5.35□□□□□ -1.55
SCN2A-210ENST00000636135 PPP6R1Q9UPN7 881 aa5.35□□□□□ -1.55
SCN2A-210ENST00000636135 VPS53Q5VIR6 699 aa5.35□□□□□ -1.55
SCN2A-210ENST00000636135 GOLGA6L7A0A1B0GV03 622 aa5.35□□□□□ -1.55
SCN2A-210ENST00000636135 MNS1Q8NEH6 495 aa5.35□□□□□ -1.55
SCN2A-210ENST00000636135 HSP90B2PQ58FF3 399 aa5.35□□□□□ -1.55
SCN2A-210ENST00000636135 RPGRIP1LQ68CZ1 1315 aa5.35□□□□□ -1.55
SCN2A-210ENST00000636135 A6NNZ2 444 aa5.34□□□□□ -1.55
SCN2A-210ENST00000636135 TUBB8Q3ZCM7 444 aa5.34□□□□□ -1.55
SCN2A-210ENST00000636135 MPHOSPH9Q99550 1183 aa5.34□□□□□ -1.55
SCN2A-210ENST00000636135 ZNF608Q9ULD9 1512 aaPredicted RBP5.34□□□□□ -1.55
SCN2A-210ENST00000636135 AK7Q96M32 723 aa5.34□□□□□ -1.55
SCN2A-210ENST00000636135 PATL2C9JE40 543 aaKnown RBP5.34□□□□□ -1.55
SCN2A-210ENST00000636135 PLCD3Q8N3E9 789 aa5.34□□□□□ -1.55
SCN2A-210ENST00000636135 USP47Q96K76 1375 aa5.34□□□□□ -1.55
SCN2A-210ENST00000636135 NUP214P35658 2090 aaPredicted RBP5.34□□□□□ -1.55
SCN2A-210ENST00000636135 ABCA6Q8N139 1617 aa5.34□□□□□ -1.55
SCN2A-210ENST00000636135 ADGRB3O60242 1522 aa5.34□□□□□ -1.55
SCN2A-210ENST00000636135 PAK3O75914 559 aaPredicted RBP5.34□□□□□ -1.55
SCN2A-210ENST00000636135 TUBBP07437 444 aa5.34□□□□□ -1.55
SCN2A-210ENST00000636135 SH3BGRP55822 239 aaPredicted RBP5.34□□□□□ -1.55
SCN2A-210ENST00000636135 MYOM1P52179 1685 aa5.34□□□□□ -1.56
SCN2A-210ENST00000636135 LRRC7Q96NW7 1537 aa5.34□□□□□ -1.56
SCN2A-210ENST00000636135 PTPRTO14522 1441 aa5.34□□□□□ -1.56
SCN2A-210ENST00000636135 HEATR1Q9H583 2144 aaKnown RBP5.34□□□□□ -1.56
SCN2A-210ENST00000636135 LUC7LQ9NQ29 371 aaKnown RBP5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms