RNA–Protein interactions for RNA: ENST00000635885.1

SYNGAP1-209, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 191 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-209ENST00000635885 KDM2BQ8NHM5 1336 aa13.47□□□□□ -0.25
SYNGAP1-209ENST00000635885 TXNDC2Q86VQ3 553 aa13.46□□□□□ -0.25
SYNGAP1-209ENST00000635885 PLEKHF1Q96S99 279 aa13.46□□□□□ -0.25
SYNGAP1-209ENST00000635885 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.46□□□□□ -0.25
SYNGAP1-209ENST00000635885 CPSF1Q10570 1443 aaKnown RBP13.46□□□□□ -0.26
SYNGAP1-209ENST00000635885 PNPLA6Q8IY17 1366 aa13.45□□□□□ -0.26
SYNGAP1-209ENST00000635885 CEBPAP49715 358 aaPredicted RBP13.45□□□□□ -0.26
SYNGAP1-209ENST00000635885 THEMISQ8N1K5 641 aaPredicted RBP13.45□□□□□ -0.26
SYNGAP1-209ENST00000635885 EDC4Q6P2E9 1401 aaKnown RBP13.45□□□□□ -0.26
SYNGAP1-209ENST00000635885 PPIP5K1Q6PFW1 1433 aa13.45□□□□□ -0.26
SYNGAP1-209ENST00000635885 ADAMTS13Q76LX8 1427 aa13.45□□□□□ -0.26
SYNGAP1-209ENST00000635885 TOPAZ1Q8N9V7 1692 aa13.44□□□□□ -0.26
SYNGAP1-209ENST00000635885 U2SURPO15042 1029 aaKnown RBP13.44□□□□□ -0.26
SYNGAP1-209ENST00000635885 DIAPH1O60610 1272 aaKnown RBP13.44□□□□□ -0.26
SYNGAP1-209ENST00000635885 PDE3AQ14432 1141 aa13.44□□□□□ -0.26
SYNGAP1-209ENST00000635885 CENPQQ7L2Z9 268 aaPredicted RBP13.44□□□□□ -0.26
SYNGAP1-209ENST00000635885 NUDT16Q96DE0 195 aaKnown RBP13.44□□□□□ -0.26
SYNGAP1-209ENST00000635885 EID1Q9Y6B2 187 aa13.44□□□□□ -0.26
SYNGAP1-209ENST00000635885 PLEKHG1Q9ULL1 1385 aa13.44□□□□□ -0.26
SYNGAP1-209ENST00000635885 TMPOP42166 694 aaKnown RBP13.43□□□□□ -0.26
SYNGAP1-209ENST00000635885 RARSP54136 660 aaKnown RBP13.43□□□□□ -0.26
SYNGAP1-209ENST00000635885 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.43□□□□□ -0.26
SYNGAP1-209ENST00000635885 MYH16Q9H6N6 1097 aa13.43□□□□□ -0.26
SYNGAP1-209ENST00000635885 PDE4AP27815 886 aa13.42□□□□□ -0.26
SYNGAP1-209ENST00000635885 PNNQ9H307 717 aaKnown RBP13.42□□□□□ -0.26
SYNGAP1-209ENST00000635885 DLG5Q8TDM6 1919 aa13.41□□□□□ -0.26
SYNGAP1-209ENST00000635885 ADAMTSL3P82987 1691 aa13.41□□□□□ -0.26
SYNGAP1-209ENST00000635885 BACH2Q9BYV9 841 aa13.41□□□□□ -0.26
SYNGAP1-209ENST00000635885 POLKQ9UBT6 870 aa13.41□□□□□ -0.26
SYNGAP1-209ENST00000635885 MAPK8IP3Q9UPT6 1336 aa13.4□□□□□ -0.26
SYNGAP1-209ENST00000635885 SLIT1O75093 1534 aa13.4□□□□□ -0.26
SYNGAP1-209ENST00000635885 LTKP29376 864 aa13.4□□□□□ -0.26
SYNGAP1-209ENST00000635885 TRIM35Q9UPQ4 493 aa13.4□□□□□ -0.26
SYNGAP1-209ENST00000635885 ROBO2Q9HCK4 1378 aa13.4□□□□□ -0.26
SYNGAP1-209ENST00000635885 ARHGAP23Q9P227 1491 aa13.4□□□□□ -0.26
SYNGAP1-209ENST00000635885 NRKQ7Z2Y5 1582 aa13.4□□□□□ -0.26
SYNGAP1-209ENST00000635885 IL16Q14005 1332 aa13.39□□□□□ -0.27
SYNGAP1-209ENST00000635885 LRRC7Q96NW7 1537 aa13.39□□□□□ -0.27
SYNGAP1-209ENST00000635885 CANXP27824 592 aaKnown RBP13.39□□□□□ -0.27
SYNGAP1-209ENST00000635885 NME9Q86XW9 330 aa13.39□□□□□ -0.27
SYNGAP1-209ENST00000635885 CCDC61Q9Y6R9 512 aa13.39□□□□□ -0.27
SYNGAP1-209ENST00000635885 VIRMAQ69YN4 1812 aaKnown RBP13.39□□□□□ -0.27
SYNGAP1-209ENST00000635885 PRR36Q9H6K5 1346 aa13.39□□□□□ -0.27
SYNGAP1-209ENST00000635885 CDK12Q9NYV4 1490 aaPredicted RBP13.38□□□□□ -0.27
SYNGAP1-209ENST00000635885 AATKQ6ZMQ8 1374 aa13.38□□□□□ -0.27
SYNGAP1-209ENST00000635885 ANP32AP39687 249 aaKnown RBP13.38□□□□□ -0.27
SYNGAP1-209ENST00000635885 PLPPR3Q6T4P5 718 aa13.38□□□□□ -0.27
SYNGAP1-209ENST00000635885 ERICH6Q7L0X2 663 aa13.38□□□□□ -0.27
SYNGAP1-209ENST00000635885 SKAP1Q86WV1 359 aa13.38□□□□□ -0.27
SYNGAP1-209ENST00000635885 PANK1Q8TE04 598 aa13.38□□□□□ -0.27
SYNGAP1-209ENST00000635885 ZRANB1Q9UGI0 708 aa13.38□□□□□ -0.27
SYNGAP1-209ENST00000635885 PTPRUQ92729 1446 aa13.38□□□□□ -0.27
SYNGAP1-209ENST00000635885 RGPD8O14715 1765 aaPredicted RBP13.37□□□□□ -0.27
SYNGAP1-209ENST00000635885 FCHSD2O94868 740 aa13.37□□□□□ -0.27
SYNGAP1-209ENST00000635885 CT47B1P0C2W7 299 aaPredicted RBP13.37□□□□□ -0.27
SYNGAP1-209ENST00000635885 FBLN1P23142 703 aa13.37□□□□□ -0.27
SYNGAP1-209ENST00000635885 ZNF692Q9BU19 519 aaPredicted RBP13.37□□□□□ -0.27
SYNGAP1-209ENST00000635885 RSPH6AQ9H0K4 717 aa13.37□□□□□ -0.27
SYNGAP1-209ENST00000635885 RIMS1Q86UR5 1692 aaKnown RBP13.37□□□□□ -0.27
SYNGAP1-209ENST00000635885 NCKAP5LQ9HCH0 1330 aa13.37□□□□□ -0.27
SYNGAP1-209ENST00000635885 RIPK4P57078 832 aa13.36□□□□□ -0.27
SYNGAP1-209ENST00000635885 COG6Q9Y2V7 657 aa13.36□□□□□ -0.27
SYNGAP1-209ENST00000635885 DIP2AQ14689 1571 aa13.36□□□□□ -0.27
SYNGAP1-209ENST00000635885 NALCNQ8IZF0 1738 aa13.36□□□□□ -0.27
SYNGAP1-209ENST00000635885 EXOSC9Q06265 439 aaKnown RBP13.35□□□□□ -0.27
SYNGAP1-209ENST00000635885 AAMPQ13685 434 aa13.35□□□□□ -0.27
SYNGAP1-209ENST00000635885 FRAT1Q92837 279 aaPredicted RBP13.35□□□□□ -0.27
SYNGAP1-209ENST00000635885 COG3Q96JB2 828 aa13.35□□□□□ -0.27
SYNGAP1-209ENST00000635885 IPO9Q96P70 1041 aaKnown RBP13.35□□□□□ -0.27
SYNGAP1-209ENST00000635885 TNNQ9UQP3 1299 aa13.35□□□□□ -0.27
SYNGAP1-209ENST00000635885 PLEKHG3A1L390 1219 aa13.34□□□□□ -0.27
SYNGAP1-209ENST00000635885 PPM1GO15355 546 aaPredicted RBP13.34□□□□□ -0.27
SYNGAP1-209ENST00000635885 IGHDP01880 384 aa13.34□□□□□ -0.27
SYNGAP1-209ENST00000635885 IL13P35225 146 aa13.34□□□□□ -0.27
SYNGAP1-209ENST00000635885 TSR2Q969E8 191 aaKnown RBP13.34□□□□□ -0.27
SYNGAP1-209ENST00000635885 CLUAP1Q96AJ1 413 aa13.34□□□□□ -0.27
SYNGAP1-209ENST00000635885 NOP58Q9Y2X3 529 aaKnown RBP13.34□□□□□ -0.27
SYNGAP1-209ENST00000635885 TBX22Q9Y458 520 aa13.34□□□□□ -0.27
SYNGAP1-209ENST00000635885 EMILIN1Q9Y6C2 1016 aa13.34□□□□□ -0.27
SYNGAP1-209ENST00000635885 CEP170BQ9Y4F5 1589 aaPredicted RBP13.33□□□□□ -0.28
SYNGAP1-209ENST00000635885 RLBP1P12271 317 aa13.33□□□□□ -0.28
SYNGAP1-209ENST00000635885 PRKAR2BP31323 418 aa13.33□□□□□ -0.28
SYNGAP1-209ENST00000635885 NFE2L2Q16236 605 aa13.33□□□□□ -0.28
SYNGAP1-209ENST00000635885 ANKLE2Q86XL3 938 aa13.33□□□□□ -0.28
SYNGAP1-209ENST00000635885 XRN1Q8IZH2 1706 aaKnown RBP13.33□□□□□ -0.28
SYNGAP1-209ENST00000635885 BCL2L13Q9BXK5 485 aa13.32□□□□□ -0.28
SYNGAP1-209ENST00000635885 FMN2Q9NZ56 1722 aa13.32□□□□□ -0.28
SYNGAP1-209ENST00000635885 TTC21BQ7Z4L5 1316 aa13.32□□□□□ -0.28
SYNGAP1-209ENST00000635885 NEFMP07197 916 aa13.31□□□□□ -0.28
SYNGAP1-209ENST00000635885 ZKSCAN2Q63HK3 967 aa13.31□□□□□ -0.28
SYNGAP1-209ENST00000635885 SLC26A8Q96RN1 970 aa13.31□□□□□ -0.28
SYNGAP1-209ENST00000635885 ACEP12821 1306 aa13.31□□□□□ -0.28
SYNGAP1-209ENST00000635885 PEAK1Q9H792 1746 aa13.3□□□□□ -0.28
SYNGAP1-209ENST00000635885 PAK3O75914 559 aaPredicted RBP13.3□□□□□ -0.28
SYNGAP1-209ENST00000635885 HMOX1P09601 288 aa13.3□□□□□ -0.28
SYNGAP1-209ENST00000635885 PMFBP1Q8TBY8 1022 aa13.3□□□□□ -0.28
SYNGAP1-209ENST00000635885 AMOTL2Q9Y2J4 779 aa13.3□□□□□ -0.28
SYNGAP1-209ENST00000635885 PTCH1Q13635 1447 aa13.3□□□□□ -0.28
SYNGAP1-209ENST00000635885 NPM2Q86SE8 214 aaKnown RBP13.29□□□□□ -0.28
SYNGAP1-209ENST00000635885 SSH1Q8WYL5 1049 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms