RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 PLEKHF1Q96S99 279 aa13.64□□□□□ -0.23
PSPC1-207ENST00000635251 ZFYVE9O95405 1425 aa13.63□□□□□ -0.23
PSPC1-207ENST00000635251 HDGFL2Q7Z4V5 671 aaPredicted RBP13.62□□□□□ -0.23
PSPC1-207ENST00000635251 FYB1O15117 783 aa13.62□□□□□ -0.23
PSPC1-207ENST00000635251 ITPRIPQ8IWB1 547 aa13.62□□□□□ -0.23
PSPC1-207ENST00000635251 ZMYM3Q14202 1370 aa13.62□□□□□ -0.23
PSPC1-207ENST00000635251 DIAPH1O60610 1272 aaKnown RBP13.61□□□□□ -0.23
PSPC1-207ENST00000635251 RIPK4P57078 832 aa13.61□□□□□ -0.23
PSPC1-207ENST00000635251 TRIM35Q9UPQ4 493 aa13.61□□□□□ -0.23
PSPC1-207ENST00000635251 SLKQ9H2G2 1235 aaPredicted RBP13.61□□□□□ -0.23
PSPC1-207ENST00000635251 PNNQ9H307 717 aaKnown RBP13.61□□□□□ -0.23
PSPC1-207ENST00000635251 RTN4Q9NQC3 1192 aaKnown RBP13.61□□□□□ -0.23
PSPC1-207ENST00000635251 PTPRMP28827 1452 aa13.6□□□□□ -0.23
PSPC1-207ENST00000635251 TRIM27P14373 513 aa13.6□□□□□ -0.23
PSPC1-207ENST00000635251 SSH1Q8WYL5 1049 aa13.6□□□□□ -0.23
PSPC1-207ENST00000635251 STAG3Q9UJ98 1225 aa13.6□□□□□ -0.23
PSPC1-207ENST00000635251 DDX19BQ9UMR2 479 aa13.6□□□□□ -0.23
PSPC1-207ENST00000635251 YTHDC2Q9H6S0 1430 aaKnown RBP13.6□□□□□ -0.23
PSPC1-207ENST00000635251 YEATS2Q9ULM3 1422 aa13.6□□□□□ -0.23
PSPC1-207ENST00000635251 COL3A1P02461 1466 aaPredicted RBP13.59□□□□□ -0.23
PSPC1-207ENST00000635251 NLRP1Q9C000 1473 aa13.59□□□□□ -0.23
PSPC1-207ENST00000635251 ATF7IPQ6VMQ6 1270 aa13.59□□□□□ -0.23
PSPC1-207ENST00000635251 TBC1D32Q96NH3 1257 aa13.59□□□□□ -0.23
PSPC1-207ENST00000635251 CDK19Q9BWU1 502 aa13.59□□□□□ -0.23
PSPC1-207ENST00000635251 NOB1Q9ULX3 412 aaKnown RBP13.59□□□□□ -0.23
PSPC1-207ENST00000635251 IL16Q14005 1332 aa13.58□□□□□ -0.23
PSPC1-207ENST00000635251 MYO5BQ9ULV0 1848 aa13.58□□□□□ -0.24
PSPC1-207ENST00000635251 PREX1Q8TCU6 1659 aa13.57□□□□□ -0.24
PSPC1-207ENST00000635251 TMEM131LA2VDJ0 1609 aa13.57□□□□□ -0.24
PSPC1-207ENST00000635251 CABP1Q9NZU7 370 aa13.57□□□□□ -0.24
PSPC1-207ENST00000635251 MED14O60244 1454 aa13.57□□□□□ -0.24
PSPC1-207ENST00000635251 BRPF3Q9ULD4 1205 aa13.57□□□□□ -0.24
PSPC1-207ENST00000635251 RICTORQ6R327 1708 aa13.57□□□□□ -0.24
PSPC1-207ENST00000635251 CD163L1Q9NR16 1453 aa13.56□□□□□ -0.24
PSPC1-207ENST00000635251 IPO8O15397 1037 aaKnown RBP13.56□□□□□ -0.24
PSPC1-207ENST00000635251 FBXO31Q5XUX0 539 aaPredicted RBP13.56□□□□□ -0.24
PSPC1-207ENST00000635251 ANKRD26Q9UPS8 1709 aa13.56□□□□□ -0.24
PSPC1-207ENST00000635251 KIF16BQ96L93 1317 aa13.56□□□□□ -0.24
PSPC1-207ENST00000635251 HDAC1Q13547 482 aaPredicted RBP13.56□□□□□ -0.24
PSPC1-207ENST00000635251 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.56□□□□□ -0.24
PSPC1-207ENST00000635251 TMEM57Q8N5G2 664 aa13.56□□□□□ -0.24
PSPC1-207ENST00000635251 CLTCQ00610 1675 aaKnown RBP13.55□□□□□ -0.24
PSPC1-207ENST00000635251 MFAP1P55081 439 aaKnown RBP13.55□□□□□ -0.24
PSPC1-207ENST00000635251 TBC1D2Q9BYX2 928 aa13.55□□□□□ -0.24
PSPC1-207ENST00000635251 FCHSD2O94868 740 aa13.54□□□□□ -0.24
PSPC1-207ENST00000635251 ALKQ9UM73 1620 aa13.53□□□□□ -0.24
PSPC1-207ENST00000635251 PRKAR2BP31323 418 aa13.53□□□□□ -0.24
PSPC1-207ENST00000635251 C22orf23Q9BZE7 217 aa13.53□□□□□ -0.24
PSPC1-207ENST00000635251 PNPLA6Q8IY17 1366 aa13.53□□□□□ -0.24
PSPC1-207ENST00000635251 ALDH1L2Q3SY69 923 aa13.52□□□□□ -0.25
PSPC1-207ENST00000635251 SPRYD3Q8NCJ5 442 aa13.52□□□□□ -0.25
PSPC1-207ENST00000635251 ARHGEF40Q8TER5 1519 aa13.51□□□□□ -0.25
PSPC1-207ENST00000635251 FBLN1P23142 703 aa13.51□□□□□ -0.25
PSPC1-207ENST00000635251 ZBTB40Q9NUA8 1239 aa13.51□□□□□ -0.25
PSPC1-207ENST00000635251 KIF20BQ96Q89 1820 aa13.51□□□□□ -0.25
PSPC1-207ENST00000635251 WAPLQ7Z5K2 1190 aa13.51□□□□□ -0.25
PSPC1-207ENST00000635251 SMC5Q8IY18 1101 aa13.51□□□□□ -0.25
PSPC1-207ENST00000635251 RSPH6AQ9H0K4 717 aa13.51□□□□□ -0.25
PSPC1-207ENST00000635251 ANTXR1Q9H6X2 564 aa13.51□□□□□ -0.25
PSPC1-207ENST00000635251 LRRC7Q96NW7 1537 aa13.5□□□□□ -0.25
PSPC1-207ENST00000635251 HMOX1P09601 288 aa13.5□□□□□ -0.25
PSPC1-207ENST00000635251 POLKQ9UBT6 870 aa13.5□□□□□ -0.25
PSPC1-207ENST00000635251 CALD1Q05682 793 aaKnown RBP13.48□□□□□ -0.25
PSPC1-207ENST00000635251 FAM135BQ49AJ0 1406 aa13.48□□□□□ -0.25
PSPC1-207ENST00000635251 NFE2L2Q16236 605 aa13.48□□□□□ -0.25
PSPC1-207ENST00000635251 LNPKQ9C0E8 428 aa13.48□□□□□ -0.25
PSPC1-207ENST00000635251 NUCB1Q02818 461 aa13.47□□□□□ -0.25
PSPC1-207ENST00000635251 ZNF428Q96B54 188 aa13.47□□□□□ -0.25
PSPC1-207ENST00000635251 THUMPD2Q9BTF0 503 aaKnown RBP13.47□□□□□ -0.25
PSPC1-207ENST00000635251 CDC42BPGQ6DT37 1551 aa13.47□□□□□ -0.25
PSPC1-207ENST00000635251 ATP7BP35670 1465 aa13.47□□□□□ -0.25
PSPC1-207ENST00000635251 PHACTR3Q96KR7 559 aa13.47□□□□□ -0.25
PSPC1-207ENST00000635251 CHMP4BQ9H444 224 aaKnown RBP13.47□□□□□ -0.25
PSPC1-207ENST00000635251 CHD1LQ86WJ1 897 aa13.46□□□□□ -0.25
PSPC1-207ENST00000635251 HSCBQ8IWL3 235 aa13.46□□□□□ -0.25
PSPC1-207ENST00000635251 EMILIN1Q9Y6C2 1016 aa13.46□□□□□ -0.25
PSPC1-207ENST00000635251 GNAI1P63096 354 aa13.46□□□□□ -0.26
PSPC1-207ENST00000635251 ELL2O00472 640 aaPredicted RBP13.45□□□□□ -0.26
PSPC1-207ENST00000635251 RIMS2Q9UQ26 1411 aa13.45□□□□□ -0.26
PSPC1-207ENST00000635251 DLC1Q96QB1 1528 aa13.45□□□□□ -0.26
PSPC1-207ENST00000635251 VAMP4O75379 141 aa13.44□□□□□ -0.26
PSPC1-207ENST00000635251 BRPF1P55201 1214 aaPredicted RBP13.44□□□□□ -0.26
PSPC1-207ENST00000635251 ANKRD45Q5TZF3 282 aa13.44□□□□□ -0.26
PSPC1-207ENST00000635251 NME9Q86XW9 330 aa13.44□□□□□ -0.26
PSPC1-207ENST00000635251 MRPL50Q8N5N7 158 aaKnown RBP13.44□□□□□ -0.26
PSPC1-207ENST00000635251 CHMP5Q9NZZ3 219 aa13.44□□□□□ -0.26
PSPC1-207ENST00000635251 A2ML1A8K2U0 1454 aa13.43□□□□□ -0.26
PSPC1-207ENST00000635251 FAM69CQ0P6D2 419 aa13.43□□□□□ -0.26
PSPC1-207ENST00000635251 MLECQ14165 292 aa13.43□□□□□ -0.26
PSPC1-207ENST00000635251 PPIP5K1Q6PFW1 1433 aa13.43□□□□□ -0.26
PSPC1-207ENST00000635251 TSPYL6Q8N831 410 aa13.43□□□□□ -0.26
PSPC1-207ENST00000635251 C1orf115Q9H7X2 142 aa13.43□□□□□ -0.26
PSPC1-207ENST00000635251 IFT57Q9NWB7 429 aa13.43□□□□□ -0.26
PSPC1-207ENST00000635251 WASLO00401 505 aaPredicted RBP13.43□□□□□ -0.26
PSPC1-207ENST00000635251 ZBTB7BO15156 539 aaPredicted RBP13.43□□□□□ -0.26
PSPC1-207ENST00000635251 IL13P35225 146 aa13.43□□□□□ -0.26
PSPC1-207ENST00000635251 CYB5RLQ6IPT4 315 aa13.43□□□□□ -0.26
PSPC1-207ENST00000635251 ARHGAP45Q92619 1136 aa13.43□□□□□ -0.26
PSPC1-207ENST00000635251 EDC4Q6P2E9 1401 aaKnown RBP13.42□□□□□ -0.26
PSPC1-207ENST00000635251 LMOD3Q0VAK6 560 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms