RNA–Protein interactions for RNA: ENST00000635152.1

BRF1-222, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,876 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-222ENST00000635152 RIPK4P57078 832 aa16.81■□□□□ 0.28
BRF1-222ENST00000635152 NEFMP07197 916 aa16.81■□□□□ 0.28
BRF1-222ENST00000635152 DAXXQ9UER7 740 aaPredicted RBP16.8■□□□□ 0.28
BRF1-222ENST00000635152 FTSJ3Q8IY81 847 aaKnown RBP16.8■□□□□ 0.28
BRF1-222ENST00000635152 SMC4Q9NTJ3 1288 aa16.8■□□□□ 0.28
BRF1-222ENST00000635152 TXNDC2Q86VQ3 553 aa16.78■□□□□ 0.28
BRF1-222ENST00000635152 ARHGEF40Q8TER5 1519 aa16.78■□□□□ 0.28
BRF1-222ENST00000635152 ZKSCAN2Q63HK3 967 aa16.78■□□□□ 0.28
BRF1-222ENST00000635152 ESF1Q9H501 851 aaKnown RBP16.78■□□□□ 0.28
BRF1-222ENST00000635152 NLRP1Q9C000 1473 aa16.78■□□□□ 0.28
BRF1-222ENST00000635152 RIMS2Q9UQ26 1411 aa16.77■□□□□ 0.28
BRF1-222ENST00000635152 PMFBP1Q8TBY8 1022 aa16.77■□□□□ 0.28
BRF1-222ENST00000635152 A2ML1A8K2U0 1454 aa16.77■□□□□ 0.27
BRF1-222ENST00000635152 NCKAP5LQ9HCH0 1330 aa16.77■□□□□ 0.27
BRF1-222ENST00000635152 DIP2BQ9P265 1576 aa16.77■□□□□ 0.27
BRF1-222ENST00000635152 SSH1Q8WYL5 1049 aa16.76■□□□□ 0.27
BRF1-222ENST00000635152 COL3A1P02461 1466 aaPredicted RBP16.76■□□□□ 0.27
BRF1-222ENST00000635152 HMOX1P09601 288 aa16.76■□□□□ 0.27
BRF1-222ENST00000635152 DZIP1LQ8IYY4 767 aaKnown RBP16.76■□□□□ 0.27
BRF1-222ENST00000635152 MVPQ14764 893 aaKnown RBP16.75■□□□□ 0.27
BRF1-222ENST00000635152 POLKQ9UBT6 870 aa16.75■□□□□ 0.27
BRF1-222ENST00000635152 SEC24BO95487 1268 aa16.75■□□□□ 0.27
BRF1-222ENST00000635152 PRKAR2BP31323 418 aa16.75■□□□□ 0.27
BRF1-222ENST00000635152 ZRANB1Q9UGI0 708 aa16.75■□□□□ 0.27
BRF1-222ENST00000635152 PPP6R1Q9UPN7 881 aa16.75■□□□□ 0.27
BRF1-222ENST00000635152 CLTCQ00610 1675 aaKnown RBP16.74■□□□□ 0.27
BRF1-222ENST00000635152 TRIM27P14373 513 aa16.74■□□□□ 0.27
BRF1-222ENST00000635152 EMILIN1Q9Y6C2 1016 aa16.74■□□□□ 0.27
BRF1-222ENST00000635152 RIMBP3CA6NJZ7 1639 aa16.74■□□□□ 0.27
BRF1-222ENST00000635152 RIMBP3BA6NNM3 1639 aa16.74■□□□□ 0.27
BRF1-222ENST00000635152 RIMBP3Q9UFD9 1639 aa16.74■□□□□ 0.27
BRF1-222ENST00000635152 ADGRB2O60241 1585 aa16.74■□□□□ 0.27
BRF1-222ENST00000635152 NCBP3Q53F19 620 aaKnown RBP16.74■□□□□ 0.27
BRF1-222ENST00000635152 NME9Q86XW9 330 aa16.74■□□□□ 0.27
BRF1-222ENST00000635152 PDZRN3Q9UPQ7 1066 aa16.74■□□□□ 0.27
BRF1-222ENST00000635152 ITPRIPQ8IWB1 547 aa16.73■□□□□ 0.27
BRF1-222ENST00000635152 METP08581 1390 aa16.72■□□□□ 0.27
BRF1-222ENST00000635152 RWDD1Q9H446 243 aaPredicted RBP16.72■□□□□ 0.27
BRF1-222ENST00000635152 ANO8Q9HCE9 1232 aaPredicted RBP16.72■□□□□ 0.27
BRF1-222ENST00000635152 NOB1Q9ULX3 412 aaKnown RBP16.72■□□□□ 0.27
BRF1-222ENST00000635152 WASLO00401 505 aaPredicted RBP16.72■□□□□ 0.27
BRF1-222ENST00000635152 PNPLA6Q8IY17 1366 aa16.72■□□□□ 0.27
BRF1-222ENST00000635152 THUMPD2Q9BTF0 503 aaKnown RBP16.71■□□□□ 0.27
BRF1-222ENST00000635152 FCHSD2O94868 740 aa16.71■□□□□ 0.27
BRF1-222ENST00000635152 PHACTR3Q96KR7 559 aa16.71■□□□□ 0.27
BRF1-222ENST00000635152 MED14O60244 1454 aa16.71■□□□□ 0.27
BRF1-222ENST00000635152 PNNQ9H307 717 aaKnown RBP16.71■□□□□ 0.26
BRF1-222ENST00000635152 CT47B1P0C2W7 299 aaPredicted RBP16.7■□□□□ 0.26
BRF1-222ENST00000635152 AAMPQ13685 434 aa16.7■□□□□ 0.26
BRF1-222ENST00000635152 ATF7IPQ6VMQ6 1270 aa16.7■□□□□ 0.26
BRF1-222ENST00000635152 RSPH6AQ9H0K4 717 aa16.7■□□□□ 0.26
BRF1-222ENST00000635152 RRS1Q15050 365 aaKnown RBP16.69■□□□□ 0.26
BRF1-222ENST00000635152 NUDT16Q96DE0 195 aaKnown RBP16.69■□□□□ 0.26
BRF1-222ENST00000635152 ZMYM3Q14202 1370 aa16.69■□□□□ 0.26
BRF1-222ENST00000635152 NUTM2FA1L443 756 aa16.69■□□□□ 0.26
BRF1-222ENST00000635152 PPIP5K1Q6PFW1 1433 aa16.69■□□□□ 0.26
BRF1-222ENST00000635152 AGLP35573 1532 aa16.69■□□□□ 0.26
BRF1-222ENST00000635152 USP19O94966 1318 aa16.68■□□□□ 0.26
BRF1-222ENST00000635152 TMEM57Q8N5G2 664 aa16.67■□□□□ 0.26
BRF1-222ENST00000635152 IL16Q14005 1332 aa16.67■□□□□ 0.26
BRF1-222ENST00000635152 SPATA31D1Q6ZQQ2 1576 aa16.67■□□□□ 0.26
BRF1-222ENST00000635152 ELL2O00472 640 aaPredicted RBP16.67■□□□□ 0.26
BRF1-222ENST00000635152 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.67■□□□□ 0.26
BRF1-222ENST00000635152 PLPPR3Q6T4P5 718 aa16.66■□□□□ 0.26
BRF1-222ENST00000635152 DDX19BQ9UMR2 479 aa16.66■□□□□ 0.26
BRF1-222ENST00000635152 NFKBIBQ15653 356 aa16.65■□□□□ 0.26
BRF1-222ENST00000635152 COG3Q96JB2 828 aa16.65■□□□□ 0.26
BRF1-222ENST00000635152 USP35Q9P2H5 1018 aa16.65■□□□□ 0.26
BRF1-222ENST00000635152 CCDC61Q9Y6R9 512 aa16.65■□□□□ 0.26
BRF1-222ENST00000635152 ATP7BP35670 1465 aa16.65■□□□□ 0.26
BRF1-222ENST00000635152 ANKRD26Q9UPS8 1709 aa16.65■□□□□ 0.26
BRF1-222ENST00000635152 LRRC7Q96NW7 1537 aa16.65■□□□□ 0.26
BRF1-222ENST00000635152 DLC1Q96QB1 1528 aa16.64■□□□□ 0.25
BRF1-222ENST00000635152 NFE2L2Q16236 605 aa16.63■□□□□ 0.25
BRF1-222ENST00000635152 REREQ9P2R6 1566 aa16.63■□□□□ 0.25
BRF1-222ENST00000635152 IL13P35225 146 aa16.63■□□□□ 0.25
BRF1-222ENST00000635152 KIF20BQ96Q89 1820 aa16.63■□□□□ 0.25
BRF1-222ENST00000635152 CPSF1Q10570 1443 aaKnown RBP16.62■□□□□ 0.25
BRF1-222ENST00000635152 FAM135BQ49AJ0 1406 aa16.62■□□□□ 0.25
BRF1-222ENST00000635152 EDC4Q6P2E9 1401 aaKnown RBP16.62■□□□□ 0.25
BRF1-222ENST00000635152 KIF16BQ96L93 1317 aa16.62■□□□□ 0.25
BRF1-222ENST00000635152 IPO8O15397 1037 aaKnown RBP16.62■□□□□ 0.25
BRF1-222ENST00000635152 TSPYL6Q8N831 410 aa16.62■□□□□ 0.25
BRF1-222ENST00000635152 HDGFP51858 240 aaKnown RBP16.62■□□□□ 0.25
BRF1-222ENST00000635152 FAM83GA6ND36 823 aa16.61■□□□□ 0.25
BRF1-222ENST00000635152 SOX12O15370 315 aa16.61■□□□□ 0.25
BRF1-222ENST00000635152 UPF2Q9HAU5 1272 aaKnown RBP16.61■□□□□ 0.25
BRF1-222ENST00000635152 PRR36Q9H6K5 1346 aa16.6■□□□□ 0.25
BRF1-222ENST00000635152 DCTN1Q14203 1278 aa16.6■□□□□ 0.25
BRF1-222ENST00000635152 ZBTB40Q9NUA8 1239 aa16.6■□□□□ 0.25
BRF1-222ENST00000635152 TNRQ92752 1358 aa16.6■□□□□ 0.25
BRF1-222ENST00000635152 MAP2P11137 1827 aaKnown RBP16.59■□□□□ 0.25
BRF1-222ENST00000635152 SETD1AO15047 1707 aaKnown RBP16.59■□□□□ 0.25
BRF1-222ENST00000635152 NRXN3Q9Y4C0 1643 aa16.59■□□□□ 0.25
BRF1-222ENST00000635152 CEBPAP49715 358 aaPredicted RBP16.59■□□□□ 0.25
BRF1-222ENST00000635152 HDAC1Q13547 482 aaPredicted RBP16.59■□□□□ 0.25
BRF1-222ENST00000635152 ALDH1L2Q3SY69 923 aa16.59■□□□□ 0.25
BRF1-222ENST00000635152 MBIPQ9NS73 344 aa16.59■□□□□ 0.25
BRF1-222ENST00000635152 CPS1P31327 1500 aa16.58■□□□□ 0.25
BRF1-222ENST00000635152 SLC26A8Q96RN1 970 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms