RNA–Protein interactions for RNA: ENST00000633671.1

LINC01002-231, Transcript of long intergenic non-protein coding RNA 1002, human

TSL 5

Gene LINC01002, Length 830 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01002-231	ENST00000633671	KRT28	Q7Z3Y7	464 aa		18.96	■□□□□ 0.63
LINC01002-231	ENST00000633671	IFNLR1	Q8IU57	520 aa	Predicted RBP	18.96	■□□□□ 0.63
LINC01002-231	ENST00000633671	KIF1A	Q12756	1690 aa		18.95	■□□□□ 0.62
LINC01002-231	ENST00000633671	FARP1	Q9Y4F1	1045 aa	Predicted RBP	18.94	■□□□□ 0.62
LINC01002-231	ENST00000633671	ADGRB2	O60241	1585 aa		18.93	■□□□□ 0.62
LINC01002-231	ENST00000633671	COL22A1	Q8NFW1	1626 aa	Predicted RBP	18.93	■□□□□ 0.62
LINC01002-231	ENST00000633671	ANKAR	Q7Z5J8	1434 aa		18.93	■□□□□ 0.62
LINC01002-231	ENST00000633671	QTRT2	Q9H974	415 aa	Known RBP	18.93	■□□□□ 0.62
LINC01002-231	ENST00000633671	SPATA31A3	Q5VYP0	1347 aa		18.93	■□□□□ 0.62
LINC01002-231	ENST00000633671	PSME1	Q06323	249 aa		18.92	■□□□□ 0.62
LINC01002-231	ENST00000633671	POTEH	Q6S545	545 aa		18.92	■□□□□ 0.62
LINC01002-231	ENST00000633671	PMFBP1	Q8TBY8	1022 aa		18.92	■□□□□ 0.62
LINC01002-231	ENST00000633671	CLSPN	Q9HAW4	1339 aa		18.92	■□□□□ 0.62
LINC01002-231	ENST00000633671	EIF3A	Q14152	1382 aa	Known RBP	18.92	■□□□□ 0.62
LINC01002-231	ENST00000633671	WASL	O00401	505 aa	Predicted RBP	18.91	■□□□□ 0.62
LINC01002-231	ENST00000633671	ZBTB47	Q9UFB7	747 aa	Predicted RBP	18.91	■□□□□ 0.62
LINC01002-231	ENST00000633671	USP21	Q9UK80	565 aa		18.91	■□□□□ 0.62
LINC01002-231	ENST00000633671	RGPD8	O14715	1765 aa	Predicted RBP	18.89	■□□□□ 0.61
LINC01002-231	ENST00000633671	RBM6	P78332	1123 aa	Known RBP	18.89	■□□□□ 0.61
LINC01002-231	ENST00000633671	SIN3A	Q96ST3	1273 aa		18.89	■□□□□ 0.61
LINC01002-231	ENST00000633671	PRR36	Q9H6K5	1346 aa		18.89	■□□□□ 0.61
LINC01002-231	ENST00000633671	TNS3	Q68CZ2	1445 aa		18.89	■□□□□ 0.61
LINC01002-231	ENST00000633671	ZEB1	P37275	1124 aa	Predicted RBP	18.88	■□□□□ 0.61
LINC01002-231	ENST00000633671	NBPF1	Q3BBV0	1214 aa		18.88	■□□□□ 0.61
LINC01002-231	ENST00000633671	LMOD2	Q6P5Q4	547 aa		18.88	■□□□□ 0.61
LINC01002-231	ENST00000633671	FNBP4	Q8N3X1	1017 aa	Predicted RBP	18.88	■□□□□ 0.61
LINC01002-231	ENST00000633671	TULP4	Q9NRJ4	1543 aa		18.88	■□□□□ 0.61
LINC01002-231	ENST00000633671	USP32	Q8NFA0	1604 aa		18.88	■□□□□ 0.61
LINC01002-231	ENST00000633671	SBNO1	A3KN83	1393 aa		18.87	■□□□□ 0.61
LINC01002-231	ENST00000633671	HAP1	P54257	671 aa	Predicted RBP	18.87	■□□□□ 0.61
LINC01002-231	ENST00000633671	NEUROD1	Q13562	356 aa		18.87	■□□□□ 0.61
LINC01002-231	ENST00000633671	L3MBTL2	Q969R5	705 aa		18.87	■□□□□ 0.61
LINC01002-231	ENST00000633671	CDK12	Q9NYV4	1490 aa	Predicted RBP	18.87	■□□□□ 0.61
LINC01002-231	ENST00000633671	ARHGEF28	Q8N1W1	1705 aa	Known RBP	18.86	■□□□□ 0.61
LINC01002-231	ENST00000633671	TRPC5	Q9UL62	973 aa	Predicted RBP	18.86	■□□□□ 0.61
LINC01002-231	ENST00000633671	KIAA1210	Q9ULL0	1709 aa		18.86	■□□□□ 0.61
LINC01002-231	ENST00000633671	KLHL34	Q8N239	644 aa		18.85	■□□□□ 0.61
LINC01002-231	ENST00000633671	GPRASP1	Q5JY77	1395 aa		18.84	■□□□□ 0.61
LINC01002-231	ENST00000633671	CCER1	Q8TC90	406 aa	Predicted RBP	18.84	■□□□□ 0.61
LINC01002-231	ENST00000633671	RGS12	O14924	1447 aa		18.83	■□□□□ 0.61
LINC01002-231	ENST00000633671	ARHGEF10	O15013	1369 aa		18.83	■□□□□ 0.61
LINC01002-231	ENST00000633671	NGDN	Q8NEJ9	315 aa	Known RBP	18.83	■□□□□ 0.6
LINC01002-231	ENST00000633671	CABLES1	Q8TDN4	633 aa		18.83	■□□□□ 0.6
LINC01002-231	ENST00000633671	NUDT16	Q96DE0	195 aa	Known RBP	18.82	■□□□□ 0.6
LINC01002-231	ENST00000633671	CDK19	Q9BWU1	502 aa		18.82	■□□□□ 0.6
LINC01002-231	ENST00000633671	ATRN	O75882	1429 aa		18.82	■□□□□ 0.6
LINC01002-231	ENST00000633671	BCL9L	Q86UU0	1499 aa		18.81	■□□□□ 0.6
LINC01002-231	ENST00000633671	ATP7B	P35670	1465 aa		18.8	■□□□□ 0.6
LINC01002-231	ENST00000633671	UPF1	Q92900	1129 aa	Known RBP eCLIP	18.8	■□□□□ 0.6
LINC01002-231	ENST00000633671	MARF1	Q9Y4F3	1742 aa	Known RBP	18.79	■□□□□ 0.6
LINC01002-231	ENST00000633671	CENPJ	Q9HC77	1338 aa	Predicted RBP	18.78	■□□□□ 0.6
LINC01002-231	ENST00000633671	PAK3	O75914	559 aa	Predicted RBP	18.78	■□□□□ 0.6
LINC01002-231	ENST00000633671	UNC5CL	Q8IV45	518 aa		18.77	■□□□□ 0.6
LINC01002-231	ENST00000633671	SLIT2	O94813	1529 aa		18.77	■□□□□ 0.6
LINC01002-231	ENST00000633671	TRPM3	Q9HCF6	1732 aa	Predicted RBP	18.75	■□□□□ 0.59
LINC01002-231	ENST00000633671	SRPK2	P78362	688 aa	Known RBP	18.75	■□□□□ 0.59
LINC01002-231	ENST00000633671	GJD4	Q96KN9	370 aa	Predicted RBP	18.75	■□□□□ 0.59
LINC01002-231	ENST00000633671	CCDC61	Q9Y6R9	512 aa		18.75	■□□□□ 0.59
LINC01002-231	ENST00000633671	ROCK2	O75116	1388 aa	Known RBP	18.74	■□□□□ 0.59
LINC01002-231	ENST00000633671	ITSN1	Q15811	1721 aa		18.74	■□□□□ 0.59
LINC01002-231	ENST00000633671	ACE	P12821	1306 aa		18.73	■□□□□ 0.59
LINC01002-231	ENST00000633671	SPOCK2	Q92563	424 aa		18.72	■□□□□ 0.59
LINC01002-231	ENST00000633671	CABP2	Q9NPB3	220 aa		18.72	■□□□□ 0.59
LINC01002-231	ENST00000633671	ABCA3	Q99758	1704 aa		18.71	■□□□□ 0.59
LINC01002-231	ENST00000633671	ALS2	Q96Q42	1657 aa		18.71	■□□□□ 0.59
LINC01002-231	ENST00000633671	PLEKHG3	A1L390	1219 aa		18.71	■□□□□ 0.59
LINC01002-231	ENST00000633671	FAM83G	A6ND36	823 aa		18.71	■□□□□ 0.59
LINC01002-231	ENST00000633671	NUBP1	P53384	320 aa		18.71	■□□□□ 0.59
LINC01002-231	ENST00000633671	NBPF8	Q3BBV2	869 aa		18.71	■□□□□ 0.59
LINC01002-231	ENST00000633671	TRPM1	Q7Z4N2	1603 aa		18.71	■□□□□ 0.58
LINC01002-231	ENST00000633671	POLR3A	O14802	1390 aa	Predicted RBP	18.7	■□□□□ 0.58
LINC01002-231	ENST00000633671	ATAD2	Q6PL18	1390 aa		18.7	■□□□□ 0.58
LINC01002-231	ENST00000633671	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	18.7	■□□□□ 0.58
LINC01002-231	ENST00000633671	CCDC9	Q9Y3X0	531 aa	Known RBP	18.7	■□□□□ 0.58
LINC01002-231	ENST00000633671	RALGAPB	Q86X10	1494 aa		18.7	■□□□□ 0.58
LINC01002-231	ENST00000633671	VPS72	Q15906	364 aa		18.69	■□□□□ 0.58
LINC01002-231	ENST00000633671	TOPAZ1	Q8N9V7	1692 aa		18.69	■□□□□ 0.58
LINC01002-231	ENST00000633671	TONSL	Q96HA7	1378 aa		18.68	■□□□□ 0.58
LINC01002-231	ENST00000633671	PPIP5K1	Q6PFW1	1433 aa		18.68	■□□□□ 0.58
LINC01002-231	ENST00000633671	NUTM2G	Q5VZR2	741 aa		18.68	■□□□□ 0.58
LINC01002-231	ENST00000633671	QRICH2	Q9H0J4	1663 aa		18.68	■□□□□ 0.58
LINC01002-231	ENST00000633671	PLCH1	Q4KWH8	1693 aa		18.67	■□□□□ 0.58
LINC01002-231	ENST00000633671	BTG4	Q9NY30	223 aa		18.67	■□□□□ 0.58
LINC01002-231	ENST00000633671	TIMELESS	Q9UNS1	1208 aa		18.67	■□□□□ 0.58
LINC01002-231	ENST00000633671	GLI3	P10071	1580 aa		18.67	■□□□□ 0.58
LINC01002-231	ENST00000633671	EVC2	Q86UK5	1308 aa		18.66	■□□□□ 0.58
LINC01002-231	ENST00000633671	PRDM11	Q9NQV5	511 aa		18.65	■□□□□ 0.58
LINC01002-231	ENST00000633671	NWD2	Q9ULI1	1742 aa		18.65	■□□□□ 0.58
LINC01002-231	ENST00000633671	ABTB2	Q8N961	1025 aa		18.64	■□□□□ 0.57
LINC01002-231	ENST00000633671	CABP1	Q9NZU7	370 aa		18.64	■□□□□ 0.57
LINC01002-231	ENST00000633671	C19orf67	A6NJJ6	358 aa		18.63	■□□□□ 0.57
LINC01002-231	ENST00000633671	CARD11	Q9BXL7	1154 aa		18.63	■□□□□ 0.57
LINC01002-231	ENST00000633671	SEPT12	Q8IYM1	358 aa		18.62	■□□□□ 0.57
LINC01002-231	ENST00000633671	RASEF	Q8IZ41	740 aa		18.62	■□□□□ 0.57
LINC01002-231	ENST00000633671	KIAA0232	Q92628	1395 aa		18.62	■□□□□ 0.57
LINC01002-231	ENST00000633671	COL14A1	Q05707	1796 aa	Known RBP	18.62	■□□□□ 0.57
LINC01002-231	ENST00000633671	CRYBG1	Q9Y4K1	1723 aa		18.61	■□□□□ 0.57
LINC01002-231	ENST00000633671	ZC3H6	P61129	1189 aa	Known RBP	18.61	■□□□□ 0.57
LINC01002-231	ENST00000633671		A0A0G2JS52	829 aa		18.6	■□□□□ 0.57
LINC01002-231	ENST00000633671	MYT1	Q01538	1121 aa		18.6	■□□□□ 0.57

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