RNA–Protein interactions for RNA: ENST00000631315.1

SPTAN1-226, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-226ENST00000631315 ABTB2Q8N961 1025 aa18.31■□□□□ 0.52
SPTAN1-226ENST00000631315 CABLES1Q8TDN4 633 aa18.31■□□□□ 0.52
SPTAN1-226ENST00000631315 TERF2IPQ9NYB0 399 aa18.31■□□□□ 0.52
SPTAN1-226ENST00000631315 HDGFL2Q7Z4V5 671 aaPredicted RBP18.3■□□□□ 0.52
SPTAN1-226ENST00000631315 LRP6O75581 1613 aa18.3■□□□□ 0.52
SPTAN1-226ENST00000631315 NUTM2GQ5VZR2 741 aa18.29■□□□□ 0.52
SPTAN1-226ENST00000631315 C8orf37Q96NL8 207 aa18.29■□□□□ 0.52
SPTAN1-226ENST00000631315 POLR3GLQ9BT43 218 aa18.29■□□□□ 0.52
SPTAN1-226ENST00000631315 NGLY1Q96IV0 654 aa18.28■□□□□ 0.52
SPTAN1-226ENST00000631315 USP6P35125 1406 aa18.28■□□□□ 0.52
SPTAN1-226ENST00000631315 KTN1Q86UP2 1357 aaKnown RBP18.28■□□□□ 0.52
SPTAN1-226ENST00000631315 BRD4O60885 1362 aaPredicted RBP18.27■□□□□ 0.51
SPTAN1-226ENST00000631315 NINLQ9Y2I6 1382 aa18.26■□□□□ 0.51
SPTAN1-226ENST00000631315 CPSF1Q10570 1443 aaKnown RBP18.25■□□□□ 0.51
SPTAN1-226ENST00000631315 NLRP13Q86W25 1043 aa18.25■□□□□ 0.51
SPTAN1-226ENST00000631315 COL22A1Q8NFW1 1626 aaPredicted RBP18.24■□□□□ 0.51
SPTAN1-226ENST00000631315 TRPM3Q9HCF6 1732 aaPredicted RBP18.24■□□□□ 0.51
SPTAN1-226ENST00000631315 NLRP6P59044 892 aa18.24■□□□□ 0.51
SPTAN1-226ENST00000631315 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.24■□□□□ 0.51
SPTAN1-226ENST00000631315 TTC21BQ7Z4L5 1316 aa18.23■□□□□ 0.51
SPTAN1-226ENST00000631315 RGS17Q9UGC6 210 aaPredicted RBP18.23■□□□□ 0.51
SPTAN1-226ENST00000631315 ZNF772Q68DY9 489 aaPredicted RBP18.22■□□□□ 0.51
SPTAN1-226ENST00000631315 AFF2P51816 1311 aa18.22■□□□□ 0.51
SPTAN1-226ENST00000631315 TTC21AQ8NDW8 1320 aa18.22■□□□□ 0.51
SPTAN1-226ENST00000631315 A0A1W2PP64 1363 aa18.21■□□□□ 0.51
SPTAN1-226ENST00000631315 SSH2Q76I76 1423 aa18.21■□□□□ 0.51
SPTAN1-226ENST00000631315 CD163L1Q9NR16 1453 aa18.2■□□□□ 0.5
SPTAN1-226ENST00000631315 ALS2Q96Q42 1657 aa18.2■□□□□ 0.5
SPTAN1-226ENST00000631315 ANKRD36BQ8N2N9 1353 aa18.18■□□□□ 0.5
SPTAN1-226ENST00000631315 C11orf95C9JLR9 678 aaPredicted RBP18.18■□□□□ 0.5
SPTAN1-226ENST00000631315 FNBP4Q8N3X1 1017 aaPredicted RBP18.18■□□□□ 0.5
SPTAN1-226ENST00000631315 PRDM11Q9NQV5 511 aa18.18■□□□□ 0.5
SPTAN1-226ENST00000631315 USP21Q9UK80 565 aa18.18■□□□□ 0.5
SPTAN1-226ENST00000631315 EDC4Q6P2E9 1401 aaKnown RBP18.17■□□□□ 0.5
SPTAN1-226ENST00000631315 FAM83GA6ND36 823 aa18.17■□□□□ 0.5
SPTAN1-226ENST00000631315 GCP02774 474 aa18.17■□□□□ 0.5
SPTAN1-226ENST00000631315 ZEB1P37275 1124 aaPredicted RBP18.17■□□□□ 0.5
SPTAN1-226ENST00000631315 ZC3H6P61129 1189 aaKnown RBP18.17■□□□□ 0.5
SPTAN1-226ENST00000631315 NME9Q86XW9 330 aa18.17■□□□□ 0.5
SPTAN1-226ENST00000631315 POTEAQ6S8J7 498 aa18.16■□□□□ 0.5
SPTAN1-226ENST00000631315 AKAP12Q02952 1782 aa18.15■□□□□ 0.5
SPTAN1-226ENST00000631315 SOX12O15370 315 aa18.15■□□□□ 0.5
SPTAN1-226ENST00000631315 QTRT2Q9H974 415 aaKnown RBP18.15■□□□□ 0.5
SPTAN1-226ENST00000631315 USP19O94966 1318 aa18.15■□□□□ 0.5
SPTAN1-226ENST00000631315 ZRANB1Q9UGI0 708 aa18.14■□□□□ 0.49
SPTAN1-226ENST00000631315 ZBTB7CA1YPR0 619 aa18.13■□□□□ 0.49
SPTAN1-226ENST00000631315 KCNH5Q8NCM2 988 aa18.13■□□□□ 0.49
SPTAN1-226ENST00000631315 KIF7Q2M1P5 1343 aa18.13■□□□□ 0.49
SPTAN1-226ENST00000631315 KIAA0232Q92628 1395 aa18.13■□□□□ 0.49
SPTAN1-226ENST00000631315 CHRNA2Q15822 529 aa18.12■□□□□ 0.49
SPTAN1-226ENST00000631315 UNC5CLQ8IV45 518 aa18.12■□□□□ 0.49
SPTAN1-226ENST00000631315 CARD14Q9BXL6 1004 aa18.12■□□□□ 0.49
SPTAN1-226ENST00000631315 BTG4Q9NY30 223 aa18.12■□□□□ 0.49
SPTAN1-226ENST00000631315 TRPC5Q9UL62 973 aaPredicted RBP18.12■□□□□ 0.49
SPTAN1-226ENST00000631315 MON2Q7Z3U7 1717 aa18.12■□□□□ 0.49
SPTAN1-226ENST00000631315 RXRBP28702 533 aa18.11■□□□□ 0.49
SPTAN1-226ENST00000631315 COG3Q96JB2 828 aa18.11■□□□□ 0.49
SPTAN1-226ENST00000631315 PANK3Q9H999 370 aa18.11■□□□□ 0.49
SPTAN1-226ENST00000631315 PIK3C2AO00443 1686 aa18.1■□□□□ 0.49
SPTAN1-226ENST00000631315 USP31Q70CQ4 1352 aa18.1■□□□□ 0.49
SPTAN1-226ENST00000631315 ABCA3Q99758 1704 aa18.09■□□□□ 0.49
SPTAN1-226ENST00000631315 NRKQ7Z2Y5 1582 aa18.09■□□□□ 0.49
SPTAN1-226ENST00000631315 BCL9LQ86UU0 1499 aa18.09■□□□□ 0.49
SPTAN1-226ENST00000631315 FYB1O15117 783 aa18.09■□□□□ 0.49
SPTAN1-226ENST00000631315 CCDC9Q9Y3X0 531 aaKnown RBP18.09■□□□□ 0.49
SPTAN1-226ENST00000631315 SLIT2O94813 1529 aa18.08■□□□□ 0.49
SPTAN1-226ENST00000631315 CPDO75976 1380 aa18.08■□□□□ 0.49
SPTAN1-226ENST00000631315 EVA1CP58658 441 aa18.08■□□□□ 0.48
SPTAN1-226ENST00000631315 GGNBP2Q9H3C7 697 aa18.08■□□□□ 0.48
SPTAN1-226ENST00000631315 NSD3Q9BZ95 1437 aa18.07■□□□□ 0.48
SPTAN1-226ENST00000631315 MARF1Q9Y4F3 1742 aaKnown RBP18.07■□□□□ 0.48
SPTAN1-226ENST00000631315 RBM6P78332 1123 aaKnown RBP18.07■□□□□ 0.48
SPTAN1-226ENST00000631315 PHRF1Q9P1Y6 1649 aaKnown RBP18.06■□□□□ 0.48
SPTAN1-226ENST00000631315 CGNL1Q0VF96 1302 aa18.06■□□□□ 0.48
SPTAN1-226ENST00000631315 STRN4Q9NRL3 753 aa18.06■□□□□ 0.48
SPTAN1-226ENST00000631315 CRYBG1Q9Y4K1 1723 aa18.06■□□□□ 0.48
SPTAN1-226ENST00000631315 MYOM1P52179 1685 aa18.06■□□□□ 0.48
SPTAN1-226ENST00000631315 WASHC2AQ641Q2 1341 aa18.05■□□□□ 0.48
SPTAN1-226ENST00000631315 SLIT3O75094 1523 aa18.05■□□□□ 0.48
SPTAN1-226ENST00000631315 ARHGEF25Q86VW2 580 aa18.05■□□□□ 0.48
SPTAN1-226ENST00000631315 GJD4Q96KN9 370 aaPredicted RBP18.05■□□□□ 0.48
SPTAN1-226ENST00000631315 CCDC7Q96M83 1385 aa18.04■□□□□ 0.48
SPTAN1-226ENST00000631315 VPS72Q15906 364 aa18.04■□□□□ 0.48
SPTAN1-226ENST00000631315 KNSTRNQ9Y448 316 aa18.04■□□□□ 0.48
SPTAN1-226ENST00000631315 COL14A1Q05707 1796 aaKnown RBP18.04■□□□□ 0.48
SPTAN1-226ENST00000631315 OVOS2A0A0J9YW53 1432 aa18.03■□□□□ 0.48
SPTAN1-226ENST00000631315 ATRNO75882 1429 aa18.03■□□□□ 0.48
SPTAN1-226ENST00000631315 OVOS2Q6IE36 1432 aa18.03■□□□□ 0.48
SPTAN1-226ENST00000631315 AATKQ6ZMQ8 1374 aa18.03■□□□□ 0.48
SPTAN1-226ENST00000631315 PLCH1Q4KWH8 1693 aa18■□□□□ 0.47
SPTAN1-226ENST00000631315 AXIN2Q9Y2T1 843 aa18■□□□□ 0.47
SPTAN1-226ENST00000631315 FBLN1P23142 703 aa17.99■□□□□ 0.47
SPTAN1-226ENST00000631315 USP35Q9P2H5 1018 aa17.99■□□□□ 0.47
SPTAN1-226ENST00000631315 NFAT5O94916 1531 aa17.98■□□□□ 0.47
SPTAN1-226ENST00000631315 NWD2Q9ULI1 1742 aa17.98■□□□□ 0.47
SPTAN1-226ENST00000631315 AMPHP49418 695 aa17.98■□□□□ 0.47
SPTAN1-226ENST00000631315 LARP1Q6PKG0 1096 aaKnown RBP17.98■□□□□ 0.47
SPTAN1-226ENST00000631315 CAMTA1Q9Y6Y1 1673 aa17.98■□□□□ 0.47
SPTAN1-226ENST00000631315 A0A0G2JS52 829 aa17.97■□□□□ 0.47
SPTAN1-226ENST00000631315 CSB-PGBD3P0DP91 1061 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms