RNA–Protein interactions for RNA: ENST00000629350.2

CDK7-215, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-215ENST00000629350 SPATA31A3Q5VYP0 1347 aa20.8■□□□□ 0.92
CDK7-215ENST00000629350 PLCH1Q4KWH8 1693 aa20.8■□□□□ 0.92
CDK7-215ENST00000629350 TNS3Q68CZ2 1445 aa20.8■□□□□ 0.92
CDK7-215ENST00000629350 ZNF772Q68DY9 489 aaPredicted RBP20.8■□□□□ 0.92
CDK7-215ENST00000629350 PHF8Q9UPP1 1060 aa20.8■□□□□ 0.92
CDK7-215ENST00000629350 REM2Q8IYK8 340 aaPredicted RBP20.79■□□□□ 0.92
CDK7-215ENST00000629350 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.78■□□□□ 0.92
CDK7-215ENST00000629350 PMFBP1Q8TBY8 1022 aa20.78■□□□□ 0.92
CDK7-215ENST00000629350 KRT28Q7Z3Y7 464 aa20.77■□□□□ 0.92
CDK7-215ENST00000629350 BCL9LQ86UU0 1499 aa20.76■□□□□ 0.91
CDK7-215ENST00000629350 CDK12Q9NYV4 1490 aaPredicted RBP20.76■□□□□ 0.91
CDK7-215ENST00000629350 L3MBTL2Q969R5 705 aa20.76■□□□□ 0.91
CDK7-215ENST00000629350 ATRNO75882 1429 aa20.75■□□□□ 0.91
CDK7-215ENST00000629350 WASLO00401 505 aaPredicted RBP20.74■□□□□ 0.91
CDK7-215ENST00000629350 PLEKHG5O94827 1062 aa20.74■□□□□ 0.91
CDK7-215ENST00000629350 CABLES1Q8TDN4 633 aa20.74■□□□□ 0.91
CDK7-215ENST00000629350 NGLY1Q96IV0 654 aa20.74■□□□□ 0.91
CDK7-215ENST00000629350 STAC3Q96MF2 364 aa20.74■□□□□ 0.91
CDK7-215ENST00000629350 NRAPQ86VF7 1730 aa20.73■□□□□ 0.91
CDK7-215ENST00000629350 GLI3P10071 1580 aa20.73■□□□□ 0.91
CDK7-215ENST00000629350 RXRBP28702 533 aa20.72■□□□□ 0.91
CDK7-215ENST00000629350 SLIT2O94813 1529 aa20.72■□□□□ 0.91
CDK7-215ENST00000629350 SBNO1A3KN83 1393 aa20.72■□□□□ 0.91
CDK7-215ENST00000629350 PHRF1Q9P1Y6 1649 aaKnown RBP20.71■□□□□ 0.91
CDK7-215ENST00000629350 FNBP4Q8N3X1 1017 aaPredicted RBP20.71■□□□□ 0.91
CDK7-215ENST00000629350 QTRT2Q9H974 415 aaKnown RBP20.71■□□□□ 0.91
CDK7-215ENST00000629350 NEUROD1Q13562 356 aa20.69■□□□□ 0.9
CDK7-215ENST00000629350 USP21Q9UK80 565 aa20.69■□□□□ 0.9
CDK7-215ENST00000629350 NWD2Q9ULI1 1742 aa20.69■□□□□ 0.9
CDK7-215ENST00000629350 BRWD3Q6RI45 1802 aa20.68■□□□□ 0.9
CDK7-215ENST00000629350 EIF3AQ14152 1382 aaKnown RBP20.67■□□□□ 0.9
CDK7-215ENST00000629350 NBPF8Q3BBV2 869 aa20.66■□□□□ 0.9
CDK7-215ENST00000629350 RBM6P78332 1123 aaKnown RBP20.65■□□□□ 0.9
CDK7-215ENST00000629350 PSME1Q06323 249 aa20.65■□□□□ 0.9
CDK7-215ENST00000629350 NUDT16Q96DE0 195 aaKnown RBP20.65■□□□□ 0.9
CDK7-215ENST00000629350 CDK19Q9BWU1 502 aa20.65■□□□□ 0.9
CDK7-215ENST00000629350 ARHGEF10O15013 1369 aa20.64■□□□□ 0.89
CDK7-215ENST00000629350 LMOD2Q6P5Q4 547 aa20.64■□□□□ 0.89
CDK7-215ENST00000629350 RALGAPBQ86X10 1494 aa20.63■□□□□ 0.89
CDK7-215ENST00000629350 UPF1Q92900 1129 aaKnown RBP eCLIP20.63■□□□□ 0.89
CDK7-215ENST00000629350 CENPJQ9HC77 1338 aaPredicted RBP20.62■□□□□ 0.89
CDK7-215ENST00000629350 NRKQ7Z2Y5 1582 aa20.62■□□□□ 0.89
CDK7-215ENST00000629350 COL14A1Q05707 1796 aaKnown RBP20.62■□□□□ 0.89
CDK7-215ENST00000629350 POLR3AO14802 1390 aaPredicted RBP20.61■□□□□ 0.89
CDK7-215ENST00000629350 SPDYE1Q8NFV5 336 aaPredicted RBP20.6■□□□□ 0.89
CDK7-215ENST00000629350 FBXO3Q9UK99 471 aa20.6■□□□□ 0.89
CDK7-215ENST00000629350 TRPC5Q9UL62 973 aaPredicted RBP20.6■□□□□ 0.89
CDK7-215ENST00000629350 CLEC11AQ9Y240 323 aa20.6■□□□□ 0.89
CDK7-215ENST00000629350 GPRASP1Q5JY77 1395 aa20.59■□□□□ 0.89
CDK7-215ENST00000629350 NGDNQ8NEJ9 315 aaKnown RBP20.58■□□□□ 0.89
CDK7-215ENST00000629350 CABP2Q9NPB3 220 aa20.58■□□□□ 0.89
CDK7-215ENST00000629350 AKAP12Q02952 1782 aa20.58■□□□□ 0.89
CDK7-215ENST00000629350 PPIP5K1Q6PFW1 1433 aa20.58■□□□□ 0.88
CDK7-215ENST00000629350 ROCK2O75116 1388 aaKnown RBP20.58■□□□□ 0.88
CDK7-215ENST00000629350 ACEP12821 1306 aa20.57■□□□□ 0.88
CDK7-215ENST00000629350 PITPNM1O00562 1244 aa20.57■□□□□ 0.88
CDK7-215ENST00000629350 PIK3C2AO00443 1686 aa20.57■□□□□ 0.88
CDK7-215ENST00000629350 FAM83GA6ND36 823 aa20.56■□□□□ 0.88
CDK7-215ENST00000629350 UNC5CLQ8IV45 518 aa20.56■□□□□ 0.88
CDK7-215ENST00000629350 TRIM26Q12899 539 aaPredicted RBP20.55■□□□□ 0.88
CDK7-215ENST00000629350 NUTM2GQ5VZR2 741 aa20.55■□□□□ 0.88
CDK7-215ENST00000629350 PAK3O75914 559 aaPredicted RBP20.54■□□□□ 0.88
CDK7-215ENST00000629350 PLEKHG3A1L390 1219 aa20.53■□□□□ 0.88
CDK7-215ENST00000629350 HAP1P54257 671 aaPredicted RBP20.53■□□□□ 0.88
CDK7-215ENST00000629350 GJD4Q96KN9 370 aaPredicted RBP20.53■□□□□ 0.88
CDK7-215ENST00000629350 LMO7Q8WWI1 1683 aa20.53■□□□□ 0.88
CDK7-215ENST00000629350 SRPK2P78362 688 aaKnown RBP20.52■□□□□ 0.88
CDK7-215ENST00000629350 CCDC61Q9Y6R9 512 aa20.52■□□□□ 0.88
CDK7-215ENST00000629350 MON2Q7Z3U7 1717 aa20.5■□□□□ 0.87
CDK7-215ENST00000629350 THSD7AQ9UPZ6 1657 aa20.5■□□□□ 0.87
CDK7-215ENST00000629350 KIAA0232Q92628 1395 aa20.49■□□□□ 0.87
CDK7-215ENST00000629350 USP6P35125 1406 aa20.49■□□□□ 0.87
CDK7-215ENST00000629350 SSH2Q76I76 1423 aa20.49■□□□□ 0.87
CDK7-215ENST00000629350 VPS72Q15906 364 aa20.48■□□□□ 0.87
CDK7-215ENST00000629350 SRCAPQ6ZRS2 3230 aa20.48■□□□□ 0.87
CDK7-215ENST00000629350 ATAD2Q6PL18 1390 aa20.47■□□□□ 0.87
CDK7-215ENST00000629350 TONSLQ96HA7 1378 aa20.47■□□□□ 0.87
CDK7-215ENST00000629350 CHRNA2Q15822 529 aa20.47■□□□□ 0.87
CDK7-215ENST00000629350 BTG4Q9NY30 223 aa20.47■□□□□ 0.87
CDK7-215ENST00000629350 USP19O94966 1318 aa20.47■□□□□ 0.87
CDK7-215ENST00000629350 CABP1Q9NZU7 370 aa20.46■□□□□ 0.87
CDK7-215ENST00000629350 SLIT3O75094 1523 aa20.46■□□□□ 0.87
CDK7-215ENST00000629350 CAMTA1Q9Y6Y1 1673 aa20.45■□□□□ 0.86
CDK7-215ENST00000629350 CD163L1Q9NR16 1453 aa20.44■□□□□ 0.86
CDK7-215ENST00000629350 COL18A1P39060 1754 aa20.44■□□□□ 0.86
CDK7-215ENST00000629350 ZC3H6P61129 1189 aaKnown RBP20.43■□□□□ 0.86
CDK7-215ENST00000629350 RGPD5Q99666 1765 aa20.42■□□□□ 0.86
CDK7-215ENST00000629350 PRDM11Q9NQV5 511 aa20.42■□□□□ 0.86
CDK7-215ENST00000629350 EVC2Q86UK5 1308 aa20.42■□□□□ 0.86
CDK7-215ENST00000629350 VASPP50552 380 aaPredicted RBP20.41■□□□□ 0.86
CDK7-215ENST00000629350 SEPT12Q8IYM1 358 aa20.41■□□□□ 0.86
CDK7-215ENST00000629350 SBNO2Q9Y2G9 1366 aa20.41■□□□□ 0.86
CDK7-215ENST00000629350 CPSF1Q10570 1443 aaKnown RBP20.4■□□□□ 0.86
CDK7-215ENST00000629350 CARD11Q9BXL7 1154 aa20.4■□□□□ 0.86
CDK7-215ENST00000629350 CCDC9Q9Y3X0 531 aaKnown RBP20.4■□□□□ 0.86
CDK7-215ENST00000629350 USP54Q70EL1 1684 aa20.39■□□□□ 0.86
CDK7-215ENST00000629350 FAM98CQ17RN3 349 aaKnown RBP20.39■□□□□ 0.85
CDK7-215ENST00000629350 ABTB2Q8N961 1025 aa20.39■□□□□ 0.85
CDK7-215ENST00000629350 WNK3Q9BYP7 1800 aa20.39■□□□□ 0.85
CDK7-215ENST00000629350 SPATA31A5Q5VU36 1347 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms