RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 EHBP1L1Q8N3D4 1523 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 ZNF608Q9ULD9 1512 aaPredicted RBP2.33□□□□□ -2.04
TCF4-264ENST00000628391 SAMD9Q5K651 1589 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 SMARCA4P51532 1647 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 CCDC196A0A1B0GTZ2 297 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 A0A1B0GUL7 405 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 SPDYE4A6NLX3 237 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 NEFHP12036 1026 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 KCNA4P22459 653 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 MTA1Q13330 715 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 MLECQ14165 292 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 RAB3GAP1Q15042 981 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 SETDB1Q15047 1291 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 RABEP1Q15276 862 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 C11orf91Q3C1V1 193 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 SLFNL1Q499Z3 407 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 NOM1Q5C9Z4 860 aaKnown RBP2.33□□□□□ -2.04
TCF4-264ENST00000628391 SWT1Q5T5J6 900 aaKnown RBP2.33□□□□□ -2.04
TCF4-264ENST00000628391 LRCH2Q5VUJ6 765 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 CLEC17AQ6ZS10 378 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 EP400NLQ6ZTU2 488 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 SMC5Q8IY18 1101 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.33□□□□□ -2.04
TCF4-264ENST00000628391 RNF217Q8TC41 542 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 TBC1D22AQ8WUA7 517 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 CXorf56Q9H5V9 222 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 SPTLC3Q9NUV7 552 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 CWC15Q9P013 229 aaKnown RBP2.33□□□□□ -2.04
TCF4-264ENST00000628391 STK26Q9P289 416 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 CTNNA3Q9UI47 895 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 PAXBP1Q9Y5B6 917 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 KIF7Q2M1P5 1343 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 MYBBP1AQ9BQG0 1328 aaKnown RBP2.33□□□□□ -2.04
TCF4-264ENST00000628391 MTUS2Q5JR59 1369 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 ATAD2Q6PL18 1390 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 ANKRD36BQ8N2N9 1353 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 PLEKHG2Q9H7P9 1386 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 ATP10AO60312 1499 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 CAMSAP2Q08AD1 1489 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 GAPVD1Q14C86 1478 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 RPRD2Q5VT52 1461 aaKnown RBP2.33□□□□□ -2.04
TCF4-264ENST00000628391 CECR2Q9BXF3 1484 aa2.33□□□□□ -2.04
TCF4-264ENST00000628391 ABCC2Q92887 1545 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 ITSN2Q9NZM3 1697 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP2.32□□□□□ -2.04
TCF4-264ENST00000628391 CCDC189A1A4V9 331 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 ERICH4A6NGS2 130 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 MYO1CO00159 1063 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 CTAGE5O15320 804 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 TPM3P06753 285 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 ATP2B1P20020 1258 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 ARID4AP29374 1257 aaPredicted RBP2.32□□□□□ -2.04
TCF4-264ENST00000628391 ATP6V1AP38606 617 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 GSCP56915 257 aaPredicted RBP2.32□□□□□ -2.04
TCF4-264ENST00000628391 NCBP1Q09161 790 aaKnown RBP2.32□□□□□ -2.04
TCF4-264ENST00000628391 TTC31Q49AM3 519 aaPredicted RBP2.32□□□□□ -2.04
TCF4-264ENST00000628391 MAP9Q49MG5 647 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 KANK4Q5T7N3 995 aaPredicted RBP2.32□□□□□ -2.04
TCF4-264ENST00000628391 RNF20Q5VTR2 975 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 MCTP2Q6DN12 878 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 ANKRD23Q86SG2 305 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 SKAP1Q86WV1 359 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 SUGP1Q8IWZ8 645 aaKnown RBP2.32□□□□□ -2.04
TCF4-264ENST00000628391 MPNDQ8N594 471 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 ZNF397Q8NF99 534 aaPredicted RBP2.32□□□□□ -2.04
TCF4-264ENST00000628391 KIF18AQ8NI77 898 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 PNISRQ8TF01 805 aaKnown RBP2.32□□□□□ -2.04
TCF4-264ENST00000628391 TNPO1Q92973 898 aaKnown RBP2.32□□□□□ -2.04
TCF4-264ENST00000628391 SNX21Q969T3 373 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 MKL1Q969V6 931 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 CALR3Q96L12 384 aaKnown RBP2.32□□□□□ -2.04
TCF4-264ENST00000628391 PAIP2Q9BPZ3 127 aaKnown RBP2.32□□□□□ -2.04
TCF4-264ENST00000628391 NOL10Q9BSC4 688 aaKnown RBP2.32□□□□□ -2.04
TCF4-264ENST00000628391 DEF6Q9H4E7 631 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 FAM53CQ9NYF3 392 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 POLKQ9UBT6 870 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 SUFUQ9UMX1 484 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 PPP6R1Q9UPN7 881 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 JRKLQ9Y4A0 524 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.32□□□□□ -2.04
TCF4-264ENST00000628391 CGNL1Q0VF96 1302 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 IGF1RP08069 1367 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 FHOD3Q2V2M9 1422 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 FGD6Q6ZV73 1430 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 EFCAB5A4FU69 1503 aa2.32□□□□□ -2.04
TCF4-264ENST00000628391 PRDM15P57071 1507 aaPredicted RBP2.32□□□□□ -2.04
TCF4-264ENST00000628391 LAMC1P11047 1609 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 PLEKHD1A6NEE1 506 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 SMTNL1A8MU46 457 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 H0YHG0 523 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 MPHOSPH10O00566 681 aaKnown RBP2.31□□□□□ -2.04
TCF4-264ENST00000628391 RIOK3O14730 519 aaKnown RBP2.31□□□□□ -2.04
TCF4-264ENST00000628391 CPP00450 1065 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 ERCC3P19447 782 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 MAP2K2P36507 400 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 USP8P40818 1118 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 HNRNPH2P55795 449 aaKnown RBP2.31□□□□□ -2.04
TCF4-264ENST00000628391 TPM4P67936 248 aa2.31□□□□□ -2.04
TCF4-264ENST00000628391 SRPK2P78362 688 aaKnown RBP2.31□□□□□ -2.04
TCF4-264ENST00000628391 IRX1P78414 480 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms