RNA–Protein interactions for RNA: ENST00000627869.1

CHRNA4-210, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-210ENST00000627869 PLEKHG5O94827 1062 aa16.86■□□□□ 0.29
CHRNA4-210ENST00000627869 BAG6P46379 1132 aa16.86■□□□□ 0.29
CHRNA4-210ENST00000627869 EN1Q05925 392 aaPredicted RBP16.86■□□□□ 0.29
CHRNA4-210ENST00000627869 NGDNQ8NEJ9 315 aaKnown RBP16.86■□□□□ 0.29
CHRNA4-210ENST00000627869 SIN3AQ96ST3 1273 aa16.86■□□□□ 0.29
CHRNA4-210ENST00000627869 NRAPQ86VF7 1730 aa16.86■□□□□ 0.29
CHRNA4-210ENST00000627869 RGPD8O14715 1765 aaPredicted RBP16.86■□□□□ 0.29
CHRNA4-210ENST00000627869 NEUROD1Q13562 356 aa16.85■□□□□ 0.29
CHRNA4-210ENST00000627869 R3HDM1Q15032 1099 aaKnown RBP16.85■□□□□ 0.29
CHRNA4-210ENST00000627869 NUDT16Q96DE0 195 aaKnown RBP16.85■□□□□ 0.29
CHRNA4-210ENST00000627869 CDK19Q9BWU1 502 aa16.85■□□□□ 0.29
CHRNA4-210ENST00000627869 FAM182BQ5T319 152 aa16.84■□□□□ 0.29
CHRNA4-210ENST00000627869 TNS1Q9HBL0 1735 aaKnown RBP16.84■□□□□ 0.29
CHRNA4-210ENST00000627869 RGPD1P0DJD0 1748 aa16.83■□□□□ 0.28
CHRNA4-210ENST00000627869 CCDC9Q9Y3X0 531 aaKnown RBP16.83■□□□□ 0.28
CHRNA4-210ENST00000627869 FAM83GA6ND36 823 aa16.82■□□□□ 0.28
CHRNA4-210ENST00000627869 CENPJQ9HC77 1338 aaPredicted RBP16.81■□□□□ 0.28
CHRNA4-210ENST00000627869 PAK3O75914 559 aaPredicted RBP16.81■□□□□ 0.28
CHRNA4-210ENST00000627869 FAM98CQ17RN3 349 aaKnown RBP16.81■□□□□ 0.28
CHRNA4-210ENST00000627869 CCDC61Q9Y6R9 512 aa16.81■□□□□ 0.28
CHRNA4-210ENST00000627869 ATP7BP35670 1465 aa16.8■□□□□ 0.28
CHRNA4-210ENST00000627869 DISP2A7MBM2 1401 aa16.79■□□□□ 0.28
CHRNA4-210ENST00000627869 ARHGEF28Q8N1W1 1705 aaKnown RBP16.79■□□□□ 0.28
CHRNA4-210ENST00000627869 KIAA1210Q9ULL0 1709 aa16.79■□□□□ 0.28
CHRNA4-210ENST00000627869 TIMELESSQ9UNS1 1208 aa16.79■□□□□ 0.28
CHRNA4-210ENST00000627869 SRPK2P78362 688 aaKnown RBP16.78■□□□□ 0.28
CHRNA4-210ENST00000627869 THSD7AQ9UPZ6 1657 aa16.78■□□□□ 0.28
CHRNA4-210ENST00000627869 A0A0G2JS52 829 aa16.77■□□□□ 0.28
CHRNA4-210ENST00000627869 MYT1Q01538 1121 aa16.77■□□□□ 0.28
CHRNA4-210ENST00000627869 EZH2Q15910 746 aaKnown RBP16.77■□□□□ 0.28
CHRNA4-210ENST00000627869 PLEKHG3A1L390 1219 aa16.76■□□□□ 0.27
CHRNA4-210ENST00000627869 NBPF8Q3BBV2 869 aa16.76■□□□□ 0.27
CHRNA4-210ENST00000627869 ACEP12821 1306 aa16.75■□□□□ 0.27
CHRNA4-210ENST00000627869 YY1P25490 414 aa16.75■□□□□ 0.27
CHRNA4-210ENST00000627869 BTG4Q9NY30 223 aa16.75■□□□□ 0.27
CHRNA4-210ENST00000627869 POLR3AO14802 1390 aaPredicted RBP16.75■□□□□ 0.27
CHRNA4-210ENST00000627869 ROCK2O75116 1388 aaKnown RBP16.75■□□□□ 0.27
CHRNA4-210ENST00000627869 TRPM3Q9HCF6 1732 aaPredicted RBP16.74■□□□□ 0.27
CHRNA4-210ENST00000627869 CAMKK2Q96RR4 588 aa16.74■□□□□ 0.27
CHRNA4-210ENST00000627869 CABP2Q9NPB3 220 aa16.74■□□□□ 0.27
CHRNA4-210ENST00000627869 COL14A1Q05707 1796 aaKnown RBP16.73■□□□□ 0.27
CHRNA4-210ENST00000627869 UTRNP46939 3433 aa16.73■□□□□ 0.27
CHRNA4-210ENST00000627869 CRYBG1Q9Y4K1 1723 aa16.72■□□□□ 0.27
CHRNA4-210ENST00000627869 ALS2Q96Q42 1657 aa16.72■□□□□ 0.27
CHRNA4-210ENST00000627869 SPATA31A5Q5VU36 1347 aa16.71■□□□□ 0.27
CHRNA4-210ENST00000627869 SPATA31A7Q8IWB4 1347 aa16.71■□□□□ 0.27
CHRNA4-210ENST00000627869 PRDM11Q9NQV5 511 aa16.71■□□□□ 0.27
CHRNA4-210ENST00000627869 RREB1Q92766 1687 aa16.71■□□□□ 0.27
CHRNA4-210ENST00000627869 EVC2Q86UK5 1308 aa16.7■□□□□ 0.26
CHRNA4-210ENST00000627869 PPIP5K1Q6PFW1 1433 aa16.7■□□□□ 0.26
CHRNA4-210ENST00000627869 NUTM2GQ5VZR2 741 aa16.7■□□□□ 0.26
CHRNA4-210ENST00000627869 ABTB2Q8N961 1025 aa16.7■□□□□ 0.26
CHRNA4-210ENST00000627869 NUP188Q5SRE5 1749 aa16.7■□□□□ 0.26
CHRNA4-210ENST00000627869 CABP1Q9NZU7 370 aa16.69■□□□□ 0.26
CHRNA4-210ENST00000627869 ITSN1Q15811 1721 aa16.69■□□□□ 0.26
CHRNA4-210ENST00000627869 TONSLQ96HA7 1378 aa16.68■□□□□ 0.26
CHRNA4-210ENST00000627869 TRIM37O94972 964 aa16.68■□□□□ 0.26
CHRNA4-210ENST00000627869 BRD4O60885 1362 aaPredicted RBP16.66■□□□□ 0.26
CHRNA4-210ENST00000627869 KIAA0232Q92628 1395 aa16.66■□□□□ 0.26
CHRNA4-210ENST00000627869 ZC3H6P61129 1189 aaKnown RBP16.66■□□□□ 0.26
CHRNA4-210ENST00000627869 NLRP13Q86W25 1043 aa16.66■□□□□ 0.26
CHRNA4-210ENST00000627869 CARD11Q9BXL7 1154 aa16.66■□□□□ 0.26
CHRNA4-210ENST00000627869 TRPM1Q7Z4N2 1603 aa16.66■□□□□ 0.26
CHRNA4-210ENST00000627869 TOPAZ1Q8N9V7 1692 aa16.65■□□□□ 0.26
CHRNA4-210ENST00000627869 CAMTA1Q9Y6Y1 1673 aa16.65■□□□□ 0.26
CHRNA4-210ENST00000627869 CHRNA2Q15822 529 aa16.64■□□□□ 0.25
CHRNA4-210ENST00000627869 APBA3O96018 575 aa16.63■□□□□ 0.25
CHRNA4-210ENST00000627869 ZEB1P37275 1124 aaPredicted RBP16.63■□□□□ 0.25
CHRNA4-210ENST00000627869 USP19O94966 1318 aa16.63■□□□□ 0.25
CHRNA4-210ENST00000627869 SPATA31A1Q5TZJ5 1347 aa16.63■□□□□ 0.25
CHRNA4-210ENST00000627869 PARD3Q8TEW0 1356 aa16.63■□□□□ 0.25
CHRNA4-210ENST00000627869 QRICH2Q9H0J4 1663 aa16.62■□□□□ 0.25
CHRNA4-210ENST00000627869 STRN4Q9NRL3 753 aa16.62■□□□□ 0.25
CHRNA4-210ENST00000627869 USP6P35125 1406 aa16.62■□□□□ 0.25
CHRNA4-210ENST00000627869 GCP02774 474 aa16.61■□□□□ 0.25
CHRNA4-210ENST00000627869 NLRP6P59044 892 aa16.61■□□□□ 0.25
CHRNA4-210ENST00000627869 FAM196AQ6ZSG2 479 aa16.61■□□□□ 0.25
CHRNA4-210ENST00000627869 ZNF692Q9BU19 519 aaPredicted RBP16.61■□□□□ 0.25
CHRNA4-210ENST00000627869 EVA1CP58658 441 aa16.6■□□□□ 0.25
CHRNA4-210ENST00000627869 CPDO75976 1380 aa16.6■□□□□ 0.25
CHRNA4-210ENST00000627869 SBNO2Q9Y2G9 1366 aa16.59■□□□□ 0.25
CHRNA4-210ENST00000627869 PHRF1Q9P1Y6 1649 aaKnown RBP16.57■□□□□ 0.24
CHRNA4-210ENST00000627869 SSH2Q76I76 1423 aa16.56■□□□□ 0.24
CHRNA4-210ENST00000627869 NINLQ9Y2I6 1382 aa16.56■□□□□ 0.24
CHRNA4-210ENST00000627869 TTC21BQ7Z4L5 1316 aa16.56■□□□□ 0.24
CHRNA4-210ENST00000627869 KCNQ2O43526 872 aa16.56■□□□□ 0.24
CHRNA4-210ENST00000627869 SPON1Q9HCB6 807 aa16.56■□□□□ 0.24
CHRNA4-210ENST00000627869 ZBTB7CA1YPR0 619 aa16.55■□□□□ 0.24
CHRNA4-210ENST00000627869 USP35Q9P2H5 1018 aa16.55■□□□□ 0.24
CHRNA4-210ENST00000627869 NRKQ7Z2Y5 1582 aa16.55■□□□□ 0.24
CHRNA4-210ENST00000627869 TTC21AQ8NDW8 1320 aa16.54■□□□□ 0.24
CHRNA4-210ENST00000627869 LARP1Q6PKG0 1096 aaKnown RBP16.54■□□□□ 0.24
CHRNA4-210ENST00000627869 PPP1R1BQ9UD71 204 aaPredicted RBP16.54■□□□□ 0.24
CHRNA4-210ENST00000627869 CASZ1Q86V15 1759 aa16.54■□□□□ 0.24
CHRNA4-210ENST00000627869 CPSF1Q10570 1443 aaKnown RBP16.53■□□□□ 0.24
CHRNA4-210ENST00000627869 KTN1Q86UP2 1357 aaKnown RBP16.53■□□□□ 0.24
CHRNA4-210ENST00000627869 NBPF14Q5TI25 921 aa16.53■□□□□ 0.24
CHRNA4-210ENST00000627869 TMC1Q8TDI8 760 aa16.53■□□□□ 0.24
CHRNA4-210ENST00000627869 BARGINQ6ZT62 677 aa16.52■□□□□ 0.24
CHRNA4-210ENST00000627869 TCP11L2Q8N4U5 519 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms