RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 PLEKHG3A1L390 1219 aa11.76□□□□□ -0.53
SGMS1-211ENST00000626236 PIP4K2BP78356 416 aa11.76□□□□□ -0.53
SGMS1-211ENST00000626236 BRINP3Q76B58 766 aa11.76□□□□□ -0.53
SGMS1-211ENST00000626236 NGDNQ8NEJ9 315 aaKnown RBP11.76□□□□□ -0.53
SGMS1-211ENST00000626236 ACEP12821 1306 aa11.76□□□□□ -0.53
SGMS1-211ENST00000626236 NRKQ7Z2Y5 1582 aa11.75□□□□□ -0.53
SGMS1-211ENST00000626236 HDGFL2Q7Z4V5 671 aaPredicted RBP11.75□□□□□ -0.53
SGMS1-211ENST00000626236 TERF2IPQ9NYB0 399 aa11.75□□□□□ -0.53
SGMS1-211ENST00000626236 A0A1W2PP64 1363 aa11.75□□□□□ -0.53
SGMS1-211ENST00000626236 POLR3AO14802 1390 aaPredicted RBP11.75□□□□□ -0.53
SGMS1-211ENST00000626236 ANKRD36BQ8N2N9 1353 aa11.75□□□□□ -0.53
SGMS1-211ENST00000626236 DDX10Q13206 875 aaKnown RBP11.74□□□□□ -0.53
SGMS1-211ENST00000626236 KTN1Q86UP2 1357 aaKnown RBP11.74□□□□□ -0.53
SGMS1-211ENST00000626236 CPSF1Q10570 1443 aaKnown RBP11.74□□□□□ -0.53
SGMS1-211ENST00000626236 PHLPP1O60346 1717 aa11.74□□□□□ -0.53
SGMS1-211ENST00000626236 KIF20BQ96Q89 1820 aa11.74□□□□□ -0.53
SGMS1-211ENST00000626236 FOXO3O43524 673 aa11.73□□□□□ -0.53
SGMS1-211ENST00000626236 DDX17Q92841 729 aaKnown RBP11.73□□□□□ -0.53
SGMS1-211ENST00000626236 PANK3Q9H999 370 aa11.73□□□□□ -0.53
SGMS1-211ENST00000626236 TRPM3Q9HCF6 1732 aaPredicted RBP11.73□□□□□ -0.53
SGMS1-211ENST00000626236 AHDC1Q5TGY3 1603 aaPredicted RBP11.72□□□□□ -0.53
SGMS1-211ENST00000626236 USP6P35125 1406 aa11.72□□□□□ -0.53
SGMS1-211ENST00000626236 XPCQ01831 940 aaPredicted RBP11.72□□□□□ -0.53
SGMS1-211ENST00000626236 PSME1Q06323 249 aa11.72□□□□□ -0.53
SGMS1-211ENST00000626236 PXDNQ92626 1479 aa11.71□□□□□ -0.53
SGMS1-211ENST00000626236 NSD3Q9BZ95 1437 aa11.71□□□□□ -0.53
SGMS1-211ENST00000626236 NPHP3Q7Z494 1330 aa11.71□□□□□ -0.53
SGMS1-211ENST00000626236 ZNF692Q9BU19 519 aaPredicted RBP11.71□□□□□ -0.53
SGMS1-211ENST00000626236 EDC4Q6P2E9 1401 aaKnown RBP11.7□□□□□ -0.54
SGMS1-211ENST00000626236 KRT28Q7Z3Y7 464 aa11.7□□□□□ -0.54
SGMS1-211ENST00000626236 CARD14Q9BXL6 1004 aa11.7□□□□□ -0.54
SGMS1-211ENST00000626236 PIK3C2AO00443 1686 aa11.7□□□□□ -0.54
SGMS1-211ENST00000626236 ALS2Q96Q42 1657 aa11.7□□□□□ -0.54
SGMS1-211ENST00000626236 ANKRD26Q9UPS8 1709 aa11.69□□□□□ -0.54
SGMS1-211ENST00000626236 COL16A1Q07092 1604 aaPredicted RBP11.69□□□□□ -0.54
SGMS1-211ENST00000626236 PAK3O75914 559 aaPredicted RBP11.69□□□□□ -0.54
SGMS1-211ENST00000626236 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.69□□□□□ -0.54
SGMS1-211ENST00000626236 KNSTRNQ9Y448 316 aa11.68□□□□□ -0.54
SGMS1-211ENST00000626236 SSH2Q76I76 1423 aa11.68□□□□□ -0.54
SGMS1-211ENST00000626236 BRD4O60885 1362 aaPredicted RBP11.67□□□□□ -0.54
SGMS1-211ENST00000626236 TTC21BQ7Z4L5 1316 aa11.67□□□□□ -0.54
SGMS1-211ENST00000626236 MARF1Q9Y4F3 1742 aaKnown RBP11.67□□□□□ -0.54
SGMS1-211ENST00000626236 TNS3Q68CZ2 1445 aa11.67□□□□□ -0.54
SGMS1-211ENST00000626236 SBNO1A3KN83 1393 aa11.67□□□□□ -0.54
SGMS1-211ENST00000626236 SOS2Q07890 1332 aaPredicted RBP11.66□□□□□ -0.54
SGMS1-211ENST00000626236 TTC21AQ8NDW8 1320 aa11.66□□□□□ -0.54
SGMS1-211ENST00000626236 USP54Q70EL1 1684 aa11.66□□□□□ -0.54
SGMS1-211ENST00000626236 PER1O15534 1290 aaPredicted RBP11.66□□□□□ -0.54
SGMS1-211ENST00000626236 CGNL1Q0VF96 1302 aa11.65□□□□□ -0.54
SGMS1-211ENST00000626236 CNGB1Q14028 1251 aaPredicted RBP11.65□□□□□ -0.54
SGMS1-211ENST00000626236 LMOD2Q6P5Q4 547 aa11.65□□□□□ -0.54
SGMS1-211ENST00000626236 NME9Q86XW9 330 aa11.65□□□□□ -0.54
SGMS1-211ENST00000626236 ABCA3Q99758 1704 aa11.64□□□□□ -0.55
SGMS1-211ENST00000626236 CRYBG1Q9Y4K1 1723 aa11.64□□□□□ -0.55
SGMS1-211ENST00000626236 ABTB2Q8N961 1025 aa11.64□□□□□ -0.55
SGMS1-211ENST00000626236 PHRF1Q9P1Y6 1649 aaKnown RBP11.64□□□□□ -0.55
SGMS1-211ENST00000626236 SPATA31A3Q5VYP0 1347 aa11.63□□□□□ -0.55
SGMS1-211ENST00000626236 SHPRHQ149N8 1683 aa11.63□□□□□ -0.55
SGMS1-211ENST00000626236 FYB1O15117 783 aa11.63□□□□□ -0.55
SGMS1-211ENST00000626236 AMER1Q5JTC6 1135 aaPredicted RBP11.63□□□□□ -0.55
SGMS1-211ENST00000626236 CC2D1BQ5T0F9 858 aaKnown RBP11.63□□□□□ -0.55
SGMS1-211ENST00000626236 NUTM2GQ5VZR2 741 aa11.63□□□□□ -0.55
SGMS1-211ENST00000626236 GGNBP2Q9H3C7 697 aa11.63□□□□□ -0.55
SGMS1-211ENST00000626236 ZRANB1Q9UGI0 708 aa11.63□□□□□ -0.55
SGMS1-211ENST00000626236 ARHGEF10O15013 1369 aa11.63□□□□□ -0.55
SGMS1-211ENST00000626236 NSD2O96028 1365 aa11.63□□□□□ -0.55
SGMS1-211ENST00000626236 COL22A1Q8NFW1 1626 aaPredicted RBP11.63□□□□□ -0.55
SGMS1-211ENST00000626236 PLEKHG5O94827 1062 aa11.62□□□□□ -0.55
SGMS1-211ENST00000626236 NLRP6P59044 892 aa11.62□□□□□ -0.55
SGMS1-211ENST00000626236 LRRC59Q96AG4 307 aaKnown RBP11.62□□□□□ -0.55
SGMS1-211ENST00000626236 MED1Q15648 1581 aaPredicted RBP11.62□□□□□ -0.55
SGMS1-211ENST00000626236 OVOS2A0A0J9YW53 1432 aa11.61□□□□□ -0.55
SGMS1-211ENST00000626236 OVOS2Q6IE36 1432 aa11.61□□□□□ -0.55
SGMS1-211ENST00000626236 HSPA1LP34931 641 aa11.61□□□□□ -0.55
SGMS1-211ENST00000626236 FBXO41Q8TF61 875 aa11.61□□□□□ -0.55
SGMS1-211ENST00000626236 COG3Q96JB2 828 aa11.61□□□□□ -0.55
SGMS1-211ENST00000626236 USP31Q70CQ4 1352 aa11.61□□□□□ -0.55
SGMS1-211ENST00000626236 LTN1O94822 1766 aa11.6□□□□□ -0.55
SGMS1-211ENST00000626236 NPC1L1Q9UHC9 1359 aa11.6□□□□□ -0.55
SGMS1-211ENST00000626236 DIEXFQ68CQ4 756 aaKnown RBP11.6□□□□□ -0.55
SGMS1-211ENST00000626236 SLIT3O75094 1523 aa11.6□□□□□ -0.55
SGMS1-211ENST00000626236 PNPLA6Q8IY17 1366 aa11.59□□□□□ -0.55
SGMS1-211ENST00000626236 MAP2P11137 1827 aaKnown RBP11.59□□□□□ -0.55
SGMS1-211ENST00000626236 MORC1Q86VD1 984 aa11.59□□□□□ -0.55
SGMS1-211ENST00000626236 NLRP13Q86W25 1043 aa11.59□□□□□ -0.55
SGMS1-211ENST00000626236 SOX12O15370 315 aa11.58□□□□□ -0.56
SGMS1-211ENST00000626236 TNNT2P45379 298 aaPredicted RBP11.58□□□□□ -0.56
SGMS1-211ENST00000626236 JCADQ9P266 1359 aa11.57□□□□□ -0.56
SGMS1-211ENST00000626236 NFAT5O94916 1531 aa11.57□□□□□ -0.56
SGMS1-211ENST00000626236 CABLES1Q8TDN4 633 aa11.57□□□□□ -0.56
SGMS1-211ENST00000626236 USP19O94966 1318 aa11.57□□□□□ -0.56
SGMS1-211ENST00000626236 PARD3Q8TEW0 1356 aa11.56□□□□□ -0.56
SGMS1-211ENST00000626236 ANP32CO43423 234 aa11.56□□□□□ -0.56
SGMS1-211ENST00000626236 HAP1P54257 671 aaPredicted RBP11.56□□□□□ -0.56
SGMS1-211ENST00000626236 RALBP1Q15311 655 aa11.55□□□□□ -0.56
SGMS1-211ENST00000626236 KCNH5Q8NCM2 988 aa11.55□□□□□ -0.56
SGMS1-211ENST00000626236 PRKRIP1Q9H875 184 aaPredicted RBP11.55□□□□□ -0.56
SGMS1-211ENST00000626236 GCP02774 474 aa11.54□□□□□ -0.56
SGMS1-211ENST00000626236 FBLN1P23142 703 aa11.54□□□□□ -0.56
SGMS1-211ENST00000626236 MKRN4PQ13434 485 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms