RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 PHF8Q9UPP1 1060 aa13.48□□□□□ -0.25
LINC01560-202ENST00000624822 USP47Q96K76 1375 aa13.47□□□□□ -0.25
LINC01560-202ENST00000624822 NPHP3Q7Z494 1330 aa13.47□□□□□ -0.25
LINC01560-202ENST00000624822 EVC2Q86UK5 1308 aa13.47□□□□□ -0.25
LINC01560-202ENST00000624822 FOXO3O43524 673 aa13.47□□□□□ -0.25
LINC01560-202ENST00000624822 PMFBP1Q8TBY8 1022 aa13.47□□□□□ -0.25
LINC01560-202ENST00000624822 PRR36Q9H6K5 1346 aa13.46□□□□□ -0.25
LINC01560-202ENST00000624822 XPCQ01831 940 aaPredicted RBP13.46□□□□□ -0.25
LINC01560-202ENST00000624822 NUDT16Q96DE0 195 aaKnown RBP13.46□□□□□ -0.25
LINC01560-202ENST00000624822 CABP2Q9NPB3 220 aa13.46□□□□□ -0.25
LINC01560-202ENST00000624822 FARP1Q9Y4F1 1045 aaPredicted RBP13.46□□□□□ -0.25
LINC01560-202ENST00000624822 JCADQ9P266 1359 aa13.45□□□□□ -0.26
LINC01560-202ENST00000624822 ST20-MTHFSA0A0A6YYL1 179 aa13.44□□□□□ -0.26
LINC01560-202ENST00000624822 SPDYE4A6NLX3 237 aa13.44□□□□□ -0.26
LINC01560-202ENST00000624822 NGDNQ8NEJ9 315 aaKnown RBP13.44□□□□□ -0.26
LINC01560-202ENST00000624822 LRRC59Q96AG4 307 aaKnown RBP13.44□□□□□ -0.26
LINC01560-202ENST00000624822 MED1Q15648 1581 aaPredicted RBP13.44□□□□□ -0.26
LINC01560-202ENST00000624822 SBNO2Q9Y2G9 1366 aa13.44□□□□□ -0.26
LINC01560-202ENST00000624822 PXDNQ92626 1479 aa13.43□□□□□ -0.26
LINC01560-202ENST00000624822 PSME1Q06323 249 aa13.43□□□□□ -0.26
LINC01560-202ENST00000624822 PPIP5K1Q6PFW1 1433 aa13.43□□□□□ -0.26
LINC01560-202ENST00000624822 SOS2Q07890 1332 aaPredicted RBP13.42□□□□□ -0.26
LINC01560-202ENST00000624822 TRPM3Q9HCF6 1732 aaPredicted RBP13.42□□□□□ -0.26
LINC01560-202ENST00000624822 KRT28Q7Z3Y7 464 aa13.42□□□□□ -0.26
LINC01560-202ENST00000624822 CCDC61Q9Y6R9 512 aa13.42□□□□□ -0.26
LINC01560-202ENST00000624822 AKAP12Q02952 1782 aa13.42□□□□□ -0.26
LINC01560-202ENST00000624822 CD44P16070 742 aaKnown RBP13.4□□□□□ -0.26
LINC01560-202ENST00000624822 LMOD2Q6P5Q4 547 aa13.4□□□□□ -0.26
LINC01560-202ENST00000624822 COL22A1Q8NFW1 1626 aaPredicted RBP13.39□□□□□ -0.27
LINC01560-202ENST00000624822 MARF1Q9Y4F3 1742 aaKnown RBP13.39□□□□□ -0.27
LINC01560-202ENST00000624822 NUTM2BA6NNL0 878 aaPredicted RBP13.39□□□□□ -0.27
LINC01560-202ENST00000624822 NUTM2EB1AL46 878 aaPredicted RBP13.39□□□□□ -0.27
LINC01560-202ENST00000624822 SLC24A1O60721 1099 aa13.39□□□□□ -0.27
LINC01560-202ENST00000624822 PAK3O75914 559 aaPredicted RBP13.39□□□□□ -0.27
LINC01560-202ENST00000624822 NUTM2AQ8IVF1 878 aaPredicted RBP13.39□□□□□ -0.27
LINC01560-202ENST00000624822 ATAD2Q6PL18 1390 aa13.39□□□□□ -0.27
LINC01560-202ENST00000624822 PNPLA6Q8IY17 1366 aa13.39□□□□□ -0.27
LINC01560-202ENST00000624822 ALS2Q96Q42 1657 aa13.39□□□□□ -0.27
LINC01560-202ENST00000624822 TNS3Q68CZ2 1445 aa13.39□□□□□ -0.27
LINC01560-202ENST00000624822 ACEP12821 1306 aa13.39□□□□□ -0.27
LINC01560-202ENST00000624822 SPATA31A6Q5VVP1 1343 aa13.39□□□□□ -0.27
LINC01560-202ENST00000624822 PLEKHG5O94827 1062 aa13.38□□□□□ -0.27
LINC01560-202ENST00000624822 EIF4G2P78344 907 aaKnown RBP eCLIP13.38□□□□□ -0.27
LINC01560-202ENST00000624822 TMF1P82094 1093 aa13.38□□□□□ -0.27
LINC01560-202ENST00000624822 TESK2Q96S53 571 aa13.38□□□□□ -0.27
LINC01560-202ENST00000624822 CABP1Q9NZU7 370 aa13.38□□□□□ -0.27
LINC01560-202ENST00000624822 ABCA3Q99758 1704 aa13.38□□□□□ -0.27
LINC01560-202ENST00000624822 MON2Q7Z3U7 1717 aa13.37□□□□□ -0.27
LINC01560-202ENST00000624822 MEX3CQ5U5Q3 659 aaKnown RBP13.37□□□□□ -0.27
LINC01560-202ENST00000624822 TMC1Q8TDI8 760 aa13.37□□□□□ -0.27
LINC01560-202ENST00000624822 SPATA31A3Q5VYP0 1347 aa13.37□□□□□ -0.27
LINC01560-202ENST00000624822 POLR3AO14802 1390 aaPredicted RBP13.36□□□□□ -0.27
LINC01560-202ENST00000624822 LRP6O75581 1613 aa13.36□□□□□ -0.27
LINC01560-202ENST00000624822 DISP3Q9P2K9 1392 aa13.36□□□□□ -0.27
LINC01560-202ENST00000624822 PLEKHG3A1L390 1219 aa13.36□□□□□ -0.27
LINC01560-202ENST00000624822 HSPA5P11021 654 aaKnown RBP13.36□□□□□ -0.27
LINC01560-202ENST00000624822 CREBZFQ9NS37 354 aa13.36□□□□□ -0.27
LINC01560-202ENST00000624822 SBNO1A3KN83 1393 aa13.35□□□□□ -0.27
LINC01560-202ENST00000624822 HAP1P54257 671 aaPredicted RBP13.35□□□□□ -0.27
LINC01560-202ENST00000624822 ARHGEF10O15013 1369 aa13.34□□□□□ -0.27
LINC01560-202ENST00000624822 POLR3GLQ9BT43 218 aa13.34□□□□□ -0.27
LINC01560-202ENST00000624822 MYOM1P52179 1685 aa13.34□□□□□ -0.27
LINC01560-202ENST00000624822 CRYBG1Q9Y4K1 1723 aa13.33□□□□□ -0.27
LINC01560-202ENST00000624822 NRKQ7Z2Y5 1582 aa13.33□□□□□ -0.28
LINC01560-202ENST00000624822 PHRF1Q9P1Y6 1649 aaKnown RBP13.33□□□□□ -0.28
LINC01560-202ENST00000624822 CDCA8Q53HL2 280 aa13.33□□□□□ -0.28
LINC01560-202ENST00000624822 USP6P35125 1406 aa13.32□□□□□ -0.28
LINC01560-202ENST00000624822 ADAMTS2O95450 1211 aa13.32□□□□□ -0.28
LINC01560-202ENST00000624822 KTN1Q86UP2 1357 aaKnown RBP13.32□□□□□ -0.28
LINC01560-202ENST00000624822 HDGFL2Q7Z4V5 671 aaPredicted RBP13.31□□□□□ -0.28
LINC01560-202ENST00000624822 PUS7Q96PZ0 661 aaKnown RBP13.31□□□□□ -0.28
LINC01560-202ENST00000624822 PIK3C2AO00443 1686 aa13.31□□□□□ -0.28
LINC01560-202ENST00000624822 NUTM2GQ5VZR2 741 aa13.3□□□□□ -0.28
LINC01560-202ENST00000624822 ABTB2Q8N961 1025 aa13.3□□□□□ -0.28
LINC01560-202ENST00000624822 CABLES1Q8TDN4 633 aa13.3□□□□□ -0.28
LINC01560-202ENST00000624822 SLC12A5Q9H2X9 1139 aa13.3□□□□□ -0.28
LINC01560-202ENST00000624822 NINLQ9Y2I6 1382 aa13.3□□□□□ -0.28
LINC01560-202ENST00000624822 PLCH1Q4KWH8 1693 aa13.29□□□□□ -0.28
LINC01560-202ENST00000624822 C8orf37Q96NL8 207 aa13.29□□□□□ -0.28
LINC01560-202ENST00000624822 TERF2IPQ9NYB0 399 aa13.29□□□□□ -0.28
LINC01560-202ENST00000624822 BRD4O60885 1362 aaPredicted RBP13.29□□□□□ -0.28
LINC01560-202ENST00000624822 CPSF1Q10570 1443 aaKnown RBP13.29□□□□□ -0.28
LINC01560-202ENST00000624822 CD163L1Q9NR16 1453 aa13.29□□□□□ -0.28
LINC01560-202ENST00000624822 KIF20BQ96Q89 1820 aa13.28□□□□□ -0.28
LINC01560-202ENST00000624822 A0A1W2PP64 1363 aa13.28□□□□□ -0.28
LINC01560-202ENST00000624822 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.27□□□□□ -0.29
LINC01560-202ENST00000624822 TTC21BQ7Z4L5 1316 aa13.26□□□□□ -0.29
LINC01560-202ENST00000624822 NGLY1Q96IV0 654 aa13.26□□□□□ -0.29
LINC01560-202ENST00000624822 EDC4Q6P2E9 1401 aaKnown RBP13.25□□□□□ -0.29
LINC01560-202ENST00000624822 ANKRD36BQ8N2N9 1353 aa13.25□□□□□ -0.29
LINC01560-202ENST00000624822 AFF2P51816 1311 aa13.25□□□□□ -0.29
LINC01560-202ENST00000624822 TTC21AQ8NDW8 1320 aa13.25□□□□□ -0.29
LINC01560-202ENST00000624822 NLRP6P59044 892 aa13.25□□□□□ -0.29
LINC01560-202ENST00000624822 NLRP13Q86W25 1043 aa13.25□□□□□ -0.29
LINC01560-202ENST00000624822 COL14A1Q05707 1796 aaKnown RBP13.25□□□□□ -0.29
LINC01560-202ENST00000624822 NWD2Q9ULI1 1742 aa13.25□□□□□ -0.29
LINC01560-202ENST00000624822 SSH2Q76I76 1423 aa13.24□□□□□ -0.29
LINC01560-202ENST00000624822 POTEIP0CG38 1075 aa13.24□□□□□ -0.29
LINC01560-202ENST00000624822 USP54Q70EL1 1684 aa13.24□□□□□ -0.29
LINC01560-202ENST00000624822 LTN1O94822 1766 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms