RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-215ENST00000622972 RIOK3O14730 519 aaKnown RBP8.56□□□□□ -1.04
LINC00963-215ENST00000622972 WAPLQ7Z5K2 1190 aa8.56□□□□□ -1.04
LINC00963-215ENST00000622972 ZNF467Q7Z7K2 595 aaPredicted RBP8.56□□□□□ -1.04
LINC00963-215ENST00000622972 ARHGEF28Q8N1W1 1705 aaKnown RBP8.56□□□□□ -1.04
LINC00963-215ENST00000622972 PNPLA6Q8IY17 1366 aa8.56□□□□□ -1.04
LINC00963-215ENST00000622972 ZNF579Q8NAF0 562 aaKnown RBP8.55□□□□□ -1.04
LINC00963-215ENST00000622972 KIF12Q96FN5 646 aa8.55□□□□□ -1.04
LINC00963-215ENST00000622972 PHF12Q96QT6 1004 aa8.55□□□□□ -1.04
LINC00963-215ENST00000622972 PCDHB13Q9Y5F0 798 aa8.55□□□□□ -1.04
LINC00963-215ENST00000622972 NPHP3Q7Z494 1330 aa8.54□□□□□ -1.04
LINC00963-215ENST00000622972 MAP3K13O43283 966 aa8.54□□□□□ -1.04
LINC00963-215ENST00000622972 FOXO3O43524 673 aa8.54□□□□□ -1.04
LINC00963-215ENST00000622972 XPCQ01831 940 aaPredicted RBP8.54□□□□□ -1.04
LINC00963-215ENST00000622972 SGIP1Q9BQI5 828 aa8.54□□□□□ -1.04
LINC00963-215ENST00000622972 QTRT2Q9H974 415 aaKnown RBP8.54□□□□□ -1.04
LINC00963-215ENST00000622972 LRPPRCP42704 1394 aaKnown RBP8.53□□□□□ -1.04
LINC00963-215ENST00000622972 SAFB2Q14151 953 aaKnown RBP eCLIP8.53□□□□□ -1.04
LINC00963-215ENST00000622972 RNF25Q96BH1 459 aaPredicted RBP8.53□□□□□ -1.04
LINC00963-215ENST00000622972 PRAG1Q86YV5 1406 aa8.53□□□□□ -1.04
LINC00963-215ENST00000622972 SOS2Q07890 1332 aaPredicted RBP8.53□□□□□ -1.04
LINC00963-215ENST00000622972 HAP1P54257 671 aaPredicted RBP8.52□□□□□ -1.05
LINC00963-215ENST00000622972 RBM6P78332 1123 aaKnown RBP8.52□□□□□ -1.05
LINC00963-215ENST00000622972 CFAP70Q5T0N1 1121 aa8.52□□□□□ -1.05
LINC00963-215ENST00000622972 POGKQ9P215 609 aa8.52□□□□□ -1.05
LINC00963-215ENST00000622972 USP21Q9UK80 565 aa8.52□□□□□ -1.05
LINC00963-215ENST00000622972 KDM2AQ9Y2K7 1162 aa8.52□□□□□ -1.05
LINC00963-215ENST00000622972 CDC42BPGQ6DT37 1551 aa8.52□□□□□ -1.05
LINC00963-215ENST00000622972 ABCC11Q96J66 1382 aa8.51□□□□□ -1.05
LINC00963-215ENST00000622972 PLEKHH1Q9ULM0 1364 aa8.51□□□□□ -1.05
LINC00963-215ENST00000622972 EVX2Q03828 476 aa8.51□□□□□ -1.05
LINC00963-215ENST00000622972 LMOD2Q6P5Q4 547 aa8.51□□□□□ -1.05
LINC00963-215ENST00000622972 UPF1Q92900 1129 aaKnown RBP eCLIP8.51□□□□□ -1.052e-6■■■□□ 15.7
LINC00963-215ENST00000622972 L3MBTL2Q969R5 705 aa8.51□□□□□ -1.05
LINC00963-215ENST00000622972 PCDHB8Q9UN66 801 aa8.51□□□□□ -1.05
LINC00963-215ENST00000622972 YTHDC2Q9H6S0 1430 aaKnown RBP8.51□□□□□ -1.05
LINC00963-215ENST00000622972 CLCN6P51797 869 aa8.5□□□□□ -1.05
LINC00963-215ENST00000622972 NEUROD1Q13562 356 aa8.5□□□□□ -1.05
LINC00963-215ENST00000622972 NBPF8Q3BBV2 869 aa8.5□□□□□ -1.05
LINC00963-215ENST00000622972 C14orf93Q9H972 538 aaKnown RBP8.5□□□□□ -1.05
LINC00963-215ENST00000622972 TRPC5Q9UL62 973 aaPredicted RBP8.5□□□□□ -1.05
LINC00963-215ENST00000622972 TECPR2O15040 1411 aa8.49□□□□□ -1.05
LINC00963-215ENST00000622972 RGPD8O14715 1765 aaPredicted RBP8.49□□□□□ -1.05
LINC00963-215ENST00000622972 IFNL1Q8IU54 200 aa8.49□□□□□ -1.05
LINC00963-215ENST00000622972 DCAF11Q8TEB1 546 aa8.49□□□□□ -1.05
LINC00963-215ENST00000622972 PRAM1Q96QH2 718 aa8.49□□□□□ -1.05
LINC00963-215ENST00000622972 PSME1Q06323 249 aa8.48□□□□□ -1.05
LINC00963-215ENST00000622972 PDAP1Q13442 181 aaKnown RBP8.48□□□□□ -1.05
LINC00963-215ENST00000622972 KRT28Q7Z3Y7 464 aa8.48□□□□□ -1.05
LINC00963-215ENST00000622972 SIRT1Q96EB6 747 aa8.48□□□□□ -1.05
LINC00963-215ENST00000622972 PHF8Q9UPP1 1060 aa8.48□□□□□ -1.05
LINC00963-215ENST00000622972 TRAK1Q9UPV9 953 aa8.48□□□□□ -1.05
LINC00963-215ENST00000622972 RALGAPBQ86X10 1494 aa8.48□□□□□ -1.05
LINC00963-215ENST00000622972 CDK12Q9NYV4 1490 aaPredicted RBP8.48□□□□□ -1.05
LINC00963-215ENST00000622972 QRICH2Q9H0J4 1663 aa8.48□□□□□ -1.05
LINC00963-215ENST00000622972 USP32Q8NFA0 1604 aa8.47□□□□□ -1.05
LINC00963-215ENST00000622972 RGS12O14924 1447 aa8.47□□□□□ -1.05
LINC00963-215ENST00000622972 FMN2Q9NZ56 1722 aa8.47□□□□□ -1.05
LINC00963-215ENST00000622972 HIRIP3Q9BW71 556 aaPredicted RBP8.47□□□□□ -1.05
LINC00963-215ENST00000622972 KIF1AQ12756 1690 aa8.46□□□□□ -1.05
LINC00963-215ENST00000622972 PXDNQ92626 1479 aa8.46□□□□□ -1.05
LINC00963-215ENST00000622972 DLC1Q96QB1 1528 aa8.46□□□□□ -1.05
LINC00963-215ENST00000622972 STK25O00506 426 aa8.46□□□□□ -1.06
LINC00963-215ENST00000622972 NBPF1Q3BBV0 1214 aa8.46□□□□□ -1.06
LINC00963-215ENST00000622972 FNBP4Q8N3X1 1017 aaPredicted RBP8.46□□□□□ -1.06
LINC00963-215ENST00000622972 PMFBP1Q8TBY8 1022 aa8.46□□□□□ -1.06
LINC00963-215ENST00000622972 MS4A3Q96HJ5 214 aa8.46□□□□□ -1.06
LINC00963-215ENST00000622972 CCDC9Q9Y3X0 531 aaKnown RBP8.46□□□□□ -1.06
LINC00963-215ENST00000622972 SPATA31A3Q5VYP0 1347 aa8.46□□□□□ -1.06
LINC00963-215ENST00000622972 MINK1Q8N4C8 1332 aaPredicted RBP8.46□□□□□ -1.06
LINC00963-215ENST00000622972 COL22A1Q8NFW1 1626 aaPredicted RBP8.46□□□□□ -1.06
LINC00963-215ENST00000622972 ADGRB2O60241 1585 aa8.45□□□□□ -1.06
LINC00963-215ENST00000622972 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.45□□□□□ -1.06
LINC00963-215ENST00000622972 PSEN1P49768 467 aa8.45□□□□□ -1.06
LINC00963-215ENST00000622972 CCER1Q8TC90 406 aaPredicted RBP8.45□□□□□ -1.06
LINC00963-215ENST00000622972 ZFP91Q96JP5 570 aaPredicted RBP8.45□□□□□ -1.06
LINC00963-215ENST00000622972 CLSPNQ9HAW4 1339 aa8.45□□□□□ -1.06
LINC00963-215ENST00000622972 MARF1Q9Y4F3 1742 aaKnown RBP8.45□□□□□ -1.06
LINC00963-215ENST00000622972 ATAD2Q6PL18 1390 aa8.45□□□□□ -1.06
LINC00963-215ENST00000622972 CABLES1Q8TDN4 633 aa8.44□□□□□ -1.06
LINC00963-215ENST00000622972 GPRASP1Q5JY77 1395 aa8.44□□□□□ -1.06
LINC00963-215ENST00000622972 TONSLQ96HA7 1378 aa8.44□□□□□ -1.06
LINC00963-215ENST00000622972 TNS3Q68CZ2 1445 aa8.44□□□□□ -1.06
LINC00963-215ENST00000622972 TOPAZ1Q8N9V7 1692 aa8.43□□□□□ -1.06
LINC00963-215ENST00000622972 A0A0G2JS52 829 aa8.43□□□□□ -1.06
LINC00963-215ENST00000622972 MYT1Q01538 1121 aa8.43□□□□□ -1.06
LINC00963-215ENST00000622972 UNC5CLQ8IV45 518 aa8.43□□□□□ -1.06
LINC00963-215ENST00000622972 HS6ST3Q8IZP7 471 aa8.43□□□□□ -1.06
LINC00963-215ENST00000622972 NGDNQ8NEJ9 315 aaKnown RBP8.43□□□□□ -1.06
LINC00963-215ENST00000622972 GJD4Q96KN9 370 aaPredicted RBP8.43□□□□□ -1.06
LINC00963-215ENST00000622972 STAC3Q96MF2 364 aa8.43□□□□□ -1.06
LINC00963-215ENST00000622972 STK24Q9Y6E0 443 aa8.43□□□□□ -1.06
LINC00963-215ENST00000622972 EIF3AQ14152 1382 aaKnown RBP8.43□□□□□ -1.06
LINC00963-215ENST00000622972 ATRNO75882 1429 aa8.43□□□□□ -1.06
LINC00963-215ENST00000622972 TULP4Q9NRJ4 1543 aa8.43□□□□□ -1.06
LINC00963-215ENST00000622972 BBXQ8WY36 941 aaPredicted RBP8.42□□□□□ -1.06
LINC00963-215ENST00000622972 BCL11BQ9C0K0 894 aaPredicted RBP8.42□□□□□ -1.06
LINC00963-215ENST00000622972 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.42□□□□□ -1.06
LINC00963-215ENST00000622972 ARHGEF10O15013 1369 aa8.42□□□□□ -1.06
LINC00963-215ENST00000622972 BCL9LQ86UU0 1499 aa8.41□□□□□ -1.06
LINC00963-215ENST00000622972 ANKARQ7Z5J8 1434 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms