RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 GAS2L2Q8NHY3 880 aa19.54■□□□□ 0.72
GABRB3-215ENST00000622697 RARSP54136 660 aaKnown RBP19.54■□□□□ 0.72
GABRB3-215ENST00000622697 CUL7Q14999 1698 aa19.54■□□□□ 0.72
GABRB3-215ENST00000622697 CNTROBQ8N137 903 aa19.54■□□□□ 0.72
GABRB3-215ENST00000622697 ADGRF5Q8IZF2 1346 aa19.54■□□□□ 0.72
GABRB3-215ENST00000622697 RABEP1Q15276 862 aa19.54■□□□□ 0.72
GABRB3-215ENST00000622697 CCAR2Q8N163 923 aaKnown RBP19.54■□□□□ 0.72
GABRB3-215ENST00000622697 CLASRPQ8N2M8 674 aaKnown RBP19.53■□□□□ 0.72
GABRB3-215ENST00000622697 MIS18AQ9NYP9 233 aa19.53■□□□□ 0.72
GABRB3-215ENST00000622697 FSD1Q9BTV5 496 aa19.53■□□□□ 0.72
GABRB3-215ENST00000622697 DISP3Q9P2K9 1392 aa19.53■□□□□ 0.72
GABRB3-215ENST00000622697 KDM4AO75164 1064 aa19.53■□□□□ 0.72
GABRB3-215ENST00000622697 DCTN1Q14203 1278 aa19.53■□□□□ 0.72
GABRB3-215ENST00000622697 DUSP27Q5VZP5 1158 aa19.52■□□□□ 0.72
GABRB3-215ENST00000622697 R3HCC1Q9Y3T6 440 aaKnown RBP19.52■□□□□ 0.72
GABRB3-215ENST00000622697 NINLQ9Y2I6 1382 aa19.52■□□□□ 0.72
GABRB3-215ENST00000622697 AKAP17AQ02040 695 aaKnown RBP19.52■□□□□ 0.71
GABRB3-215ENST00000622697 WAPLQ7Z5K2 1190 aa19.52■□□□□ 0.71
GABRB3-215ENST00000622697 SSH1Q8WYL5 1049 aa19.52■□□□□ 0.71
GABRB3-215ENST00000622697 TPD52L1Q16890 204 aaPredicted RBP19.51■□□□□ 0.71
GABRB3-215ENST00000622697 ESCO1Q5FWF5 840 aa19.51■□□□□ 0.71
GABRB3-215ENST00000622697 HDGFL1Q5TGJ6 251 aa19.51■□□□□ 0.71
GABRB3-215ENST00000622697 SYNE3Q6ZMZ3 975 aa19.51■□□□□ 0.71
GABRB3-215ENST00000622697 SLC26A8Q96RN1 970 aa19.51■□□□□ 0.71
GABRB3-215ENST00000622697 RTEL1-TNFRSF6BF6WH68 1400 aa19.51■□□□□ 0.71
GABRB3-215ENST00000622697 MPNDQ8N594 471 aa19.51■□□□□ 0.71
GABRB3-215ENST00000622697 BIVM-ERCC5R4GMW8 1640 aa19.51■□□□□ 0.71
GABRB3-215ENST00000622697 K7ELQ4 463 aaPredicted RBP19.51■□□□□ 0.71
GABRB3-215ENST00000622697 CT47B1P0C2W7 299 aaPredicted RBP19.51■□□□□ 0.71
GABRB3-215ENST00000622697 SLC52A1Q9NWF4 448 aa19.51■□□□□ 0.71
GABRB3-215ENST00000622697 SASS6Q6UVJ0 657 aa19.5■□□□□ 0.71
GABRB3-215ENST00000622697 WASHC4Q2M389 1173 aa19.5■□□□□ 0.71
GABRB3-215ENST00000622697 DNAJC2Q99543 621 aaKnown RBP19.5■□□□□ 0.71
GABRB3-215ENST00000622697 CPLX2Q6PUV4 134 aaKnown RBP19.49■□□□□ 0.71
GABRB3-215ENST00000622697 FIBPO43427 364 aa19.49■□□□□ 0.71
GABRB3-215ENST00000622697 FCHSD2O94868 740 aa19.49■□□□□ 0.71
GABRB3-215ENST00000622697 TRIM29Q14134 588 aa19.49■□□□□ 0.71
GABRB3-215ENST00000622697 LRRFIP1Q32MZ4 808 aaKnown RBP19.48■□□□□ 0.71
GABRB3-215ENST00000622697 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.48■□□□□ 0.71
GABRB3-215ENST00000622697 NFXL1Q6ZNB6 911 aa19.48■□□□□ 0.71
GABRB3-215ENST00000622697 ANO8Q9HCE9 1232 aaPredicted RBP19.48■□□□□ 0.71
GABRB3-215ENST00000622697 TRDNQ13061 729 aa19.48■□□□□ 0.71
GABRB3-215ENST00000622697 THOC2Q8NI27 1593 aaKnown RBP19.48■□□□□ 0.71
GABRB3-215ENST00000622697 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.48■□□□□ 0.71
GABRB3-215ENST00000622697 URB2Q14146 1524 aaKnown RBP19.48■□□□□ 0.71
GABRB3-215ENST00000622697 LRRCC1Q9C099 1032 aa19.48■□□□□ 0.71
GABRB3-215ENST00000622697 MCM4P33991 863 aa19.47■□□□□ 0.71
GABRB3-215ENST00000622697 SIL1Q9H173 461 aa19.47■□□□□ 0.71
GABRB3-215ENST00000622697 MCM10Q7L590 875 aa19.47■□□□□ 0.71
GABRB3-215ENST00000622697 IL1RAPL2Q9NP60 686 aa19.47■□□□□ 0.71
GABRB3-215ENST00000622697 NFE2L2Q16236 605 aa19.47■□□□□ 0.71
GABRB3-215ENST00000622697 NKTRP30414 1462 aaKnown RBP19.46■□□□□ 0.71
GABRB3-215ENST00000622697 PDE4CQ08493 712 aa19.46■□□□□ 0.71
GABRB3-215ENST00000622697 MARCH6O60337 910 aa19.46■□□□□ 0.71
GABRB3-215ENST00000622697 TPM3P06753 285 aa19.46■□□□□ 0.71
GABRB3-215ENST00000622697 IFT57Q9NWB7 429 aa19.46■□□□□ 0.71
GABRB3-215ENST00000622697 G3V3G9 751 aa19.45■□□□□ 0.7
GABRB3-215ENST00000622697 DCAF8Q5TAQ9 597 aa19.45■□□□□ 0.7
GABRB3-215ENST00000622697 NOC3LQ8WTT2 800 aaKnown RBP19.45■□□□□ 0.7
GABRB3-215ENST00000622697 CHMP4CQ96CF2 233 aa19.45■□□□□ 0.7
GABRB3-215ENST00000622697 SMARCA5O60264 1052 aaPredicted RBP19.45■□□□□ 0.7
GABRB3-215ENST00000622697 ZNF692Q9BU19 519 aaPredicted RBP19.45■□□□□ 0.7
GABRB3-215ENST00000622697 RPGRIP1LQ68CZ1 1315 aa19.45■□□□□ 0.7
GABRB3-215ENST00000622697 IGHDP01880 384 aa19.45■□□□□ 0.7
GABRB3-215ENST00000622697 CCT4P50991 539 aaKnown RBP19.45■□□□□ 0.7
GABRB3-215ENST00000622697 GPRASP1Q5JY77 1395 aa19.44■□□□□ 0.7
GABRB3-215ENST00000622697 PEG3Q9GZU2 1588 aa19.44■□□□□ 0.7
GABRB3-215ENST00000622697 VPS53Q5VIR6 699 aa19.44■□□□□ 0.7
GABRB3-215ENST00000622697 CCDC73Q6ZRK6 1079 aa19.44■□□□□ 0.7
GABRB3-215ENST00000622697 ATAD2Q6PL18 1390 aa19.44■□□□□ 0.7
GABRB3-215ENST00000622697 EXOC6BQ9Y2D4 811 aa19.44■□□□□ 0.7
GABRB3-215ENST00000622697 GRIN2AQ12879 1464 aa19.44■□□□□ 0.7
GABRB3-215ENST00000622697 CEBPZQ03701 1054 aaKnown RBP19.44■□□□□ 0.7
GABRB3-215ENST00000622697 GRPEL1Q9HAV7 217 aa19.44■□□□□ 0.7
GABRB3-215ENST00000622697 TMX4Q9H1E5 349 aaPredicted RBP19.43■□□□□ 0.7
GABRB3-215ENST00000622697 STK3Q13188 491 aa19.43■□□□□ 0.7
GABRB3-215ENST00000622697 ZNF608Q9ULD9 1512 aaPredicted RBP19.43■□□□□ 0.7
GABRB3-215ENST00000622697 HOMER1Q86YM7 354 aa19.43■□□□□ 0.7
GABRB3-215ENST00000622697 PLEKHO1Q53GL0 409 aaPredicted RBP19.42■□□□□ 0.7
GABRB3-215ENST00000622697 NUDT16Q96DE0 195 aaKnown RBP19.42■□□□□ 0.7
GABRB3-215ENST00000622697 KIF14Q15058 1648 aa19.42■□□□□ 0.7
GABRB3-215ENST00000622697 ATF3P18847 181 aa19.42■□□□□ 0.7
GABRB3-215ENST00000622697 PSMA5P28066 241 aa19.42■□□□□ 0.7
GABRB3-215ENST00000622697 RALYLQ86SE5 291 aaKnown RBP19.42■□□□□ 0.7
GABRB3-215ENST00000622697 TSPY26PQ9H489 355 aa19.42■□□□□ 0.7
GABRB3-215ENST00000622697 EMILIN1Q9Y6C2 1016 aa19.42■□□□□ 0.7
GABRB3-215ENST00000622697 NME9Q86XW9 330 aa19.41■□□□□ 0.7
GABRB3-215ENST00000622697 SRCIN1Q9C0H9 1055 aa19.41■□□□□ 0.7
GABRB3-215ENST00000622697 CCDC39Q9UFE4 941 aa19.41■□□□□ 0.7
GABRB3-215ENST00000622697 LRPPRCP42704 1394 aaKnown RBP19.41■□□□□ 0.7
GABRB3-215ENST00000622697 MBD3O95983 291 aa19.41■□□□□ 0.7
GABRB3-215ENST00000622697 FAM177BA6PVY3 158 aa19.41■□□□□ 0.7
GABRB3-215ENST00000622697 VPS37DQ86XT2 251 aa19.41■□□□□ 0.7
GABRB3-215ENST00000622697 SRGAP3O43295 1099 aa19.4■□□□□ 0.7
GABRB3-215ENST00000622697 MYL6BP14649 208 aa19.4■□□□□ 0.7
GABRB3-215ENST00000622697 MCM2P49736 904 aa19.4■□□□□ 0.7
GABRB3-215ENST00000622697 ZNF530Q6P9A1 599 aaPredicted RBP19.4■□□□□ 0.7
GABRB3-215ENST00000622697 RAD21O60216 631 aa19.4■□□□□ 0.7
GABRB3-215ENST00000622697 TRIM27P14373 513 aa19.4■□□□□ 0.7
GABRB3-215ENST00000622697 LAMC3Q9Y6N6 1575 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms