RNA–Protein interactions for RNA: ENST00000622017.4

TRO-225, Transcript of trophinin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRO, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-225ENST00000622017 NPC1L1Q9UHC9 1359 aa18.67■□□□□ 0.58
TRO-225ENST00000622017 NINLQ9Y2I6 1382 aa18.67■□□□□ 0.58
TRO-225ENST00000622017 NUTM2BA6NNL0 878 aaPredicted RBP18.66■□□□□ 0.58
TRO-225ENST00000622017 NUTM2EB1AL46 878 aaPredicted RBP18.66■□□□□ 0.58
TRO-225ENST00000622017 PLEKHG5O94827 1062 aa18.66■□□□□ 0.58
TRO-225ENST00000622017 CENPBP07199 599 aaPredicted RBP18.66■□□□□ 0.58
TRO-225ENST00000622017 CNGB1Q14028 1251 aaPredicted RBP18.66■□□□□ 0.58
TRO-225ENST00000622017 AMER1Q5JTC6 1135 aaPredicted RBP18.66■□□□□ 0.58
TRO-225ENST00000622017 NUTM2AQ8IVF1 878 aaPredicted RBP18.66■□□□□ 0.58
TRO-225ENST00000622017 SLC12A5Q9H2X9 1139 aa18.66■□□□□ 0.58
TRO-225ENST00000622017 MYBBP1AQ9BQG0 1328 aaKnown RBP18.66■□□□□ 0.58
TRO-225ENST00000622017 CCDC184Q52MB2 194 aa18.66■□□□□ 0.58
TRO-225ENST00000622017 HDGFL2Q7Z4V5 671 aaPredicted RBP18.66■□□□□ 0.58
TRO-225ENST00000622017 PXDNQ92626 1479 aa18.65■□□□□ 0.58
TRO-225ENST00000622017 SPATA31A3Q5VYP0 1347 aa18.65■□□□□ 0.58
TRO-225ENST00000622017 HAP1P54257 671 aaPredicted RBP18.65■□□□□ 0.58
TRO-225ENST00000622017 CARD14Q9BXL6 1004 aa18.65■□□□□ 0.58
TRO-225ENST00000622017 MRS2Q9HD23 443 aa18.65■□□□□ 0.58
TRO-225ENST00000622017 TERF2IPQ9NYB0 399 aa18.65■□□□□ 0.58
TRO-225ENST00000622017 POLR3AO14802 1390 aaPredicted RBP18.64■□□□□ 0.57
TRO-225ENST00000622017 SPATA31A6Q5VVP1 1343 aa18.64■□□□□ 0.57
TRO-225ENST00000622017 CC2D1BQ5T0F9 858 aaKnown RBP18.64■□□□□ 0.57
TRO-225ENST00000622017 SBNO1A3KN83 1393 aa18.63■□□□□ 0.57
TRO-225ENST00000622017 SHPRHQ149N8 1683 aa18.63■□□□□ 0.57
TRO-225ENST00000622017 MEX3CQ5U5Q3 659 aaKnown RBP18.63■□□□□ 0.57
TRO-225ENST00000622017 ABTB2Q8N961 1025 aa18.62■□□□□ 0.57
TRO-225ENST00000622017 ANKRD36BQ8N2N9 1353 aa18.62■□□□□ 0.57
TRO-225ENST00000622017 ARHGEF10O15013 1369 aa18.61■□□□□ 0.57
TRO-225ENST00000622017 BRD4O60885 1362 aaPredicted RBP18.61■□□□□ 0.57
TRO-225ENST00000622017 PNPLA6Q8IY17 1366 aa18.61■□□□□ 0.57
TRO-225ENST00000622017 TNS3Q68CZ2 1445 aa18.6■□□□□ 0.57
TRO-225ENST00000622017 NLRP13Q86W25 1043 aa18.59■□□□□ 0.57
TRO-225ENST00000622017 AKAP12Q02952 1782 aa18.59■□□□□ 0.57
TRO-225ENST00000622017 NUTM2GQ5VZR2 741 aa18.58■□□□□ 0.57
TRO-225ENST00000622017 PHF23Q9BUL5 403 aaPredicted RBP18.58■□□□□ 0.57
TRO-225ENST00000622017 NSD3Q9BZ95 1437 aa18.58■□□□□ 0.57
TRO-225ENST00000622017 TRPM3Q9HCF6 1732 aaPredicted RBP18.58■□□□□ 0.56
TRO-225ENST00000622017 ADAMTS2O95450 1211 aa18.57■□□□□ 0.56
TRO-225ENST00000622017 USP6P35125 1406 aa18.57■□□□□ 0.56
TRO-225ENST00000622017 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.57■□□□□ 0.56
TRO-225ENST00000622017 CABLES1Q8TDN4 633 aa18.57■□□□□ 0.56
TRO-225ENST00000622017 CPSF1Q10570 1443 aaKnown RBP18.56■□□□□ 0.56
TRO-225ENST00000622017 NLRP6P59044 892 aa18.55■□□□□ 0.56
TRO-225ENST00000622017 TTC21BQ7Z4L5 1316 aa18.55■□□□□ 0.56
TRO-225ENST00000622017 A0A1W2PP64 1363 aa18.54■□□□□ 0.56
TRO-225ENST00000622017 CD163L1Q9NR16 1453 aa18.54■□□□□ 0.56
TRO-225ENST00000622017 TTC21AQ8NDW8 1320 aa18.54■□□□□ 0.56
TRO-225ENST00000622017 COL22A1Q8NFW1 1626 aaPredicted RBP18.53■□□□□ 0.56
TRO-225ENST00000622017 ALS2Q96Q42 1657 aa18.53■□□□□ 0.56
TRO-225ENST00000622017 PNISRQ8TF01 805 aaKnown RBP18.53■□□□□ 0.56
TRO-225ENST00000622017 CGNL1Q0VF96 1302 aa18.53■□□□□ 0.56
TRO-225ENST00000622017 MON2Q7Z3U7 1717 aa18.52■□□□□ 0.56
TRO-225ENST00000622017 PPP2R1AP30153 589 aa18.52■□□□□ 0.56
TRO-225ENST00000622017 FAM9BQ8IZU0 186 aa18.52■□□□□ 0.56
TRO-225ENST00000622017 NGLY1Q96IV0 654 aa18.52■□□□□ 0.56
TRO-225ENST00000622017 C8orf37Q96NL8 207 aa18.52■□□□□ 0.56
TRO-225ENST00000622017 MED1Q15648 1581 aaPredicted RBP18.52■□□□□ 0.56
TRO-225ENST00000622017 NSD2O96028 1365 aa18.51■□□□□ 0.55
TRO-225ENST00000622017 EDC4Q6P2E9 1401 aaKnown RBP18.49■□□□□ 0.55
TRO-225ENST00000622017 LRP6O75581 1613 aa18.48■□□□□ 0.55
TRO-225ENST00000622017 SSH2Q76I76 1423 aa18.48■□□□□ 0.55
TRO-225ENST00000622017 MORC1Q86VD1 984 aa18.48■□□□□ 0.55
TRO-225ENST00000622017 NME9Q86XW9 330 aa18.48■□□□□ 0.55
TRO-225ENST00000622017 MARF1Q9Y4F3 1742 aaKnown RBP18.47■□□□□ 0.55
TRO-225ENST00000622017 ZBTB7CA1YPR0 619 aa18.46■□□□□ 0.55
TRO-225ENST00000622017 SOX12O15370 315 aa18.46■□□□□ 0.55
TRO-225ENST00000622017 ZC3H6P61129 1189 aaKnown RBP18.46■□□□□ 0.55
TRO-225ENST00000622017 GCP02774 474 aa18.45■□□□□ 0.54
TRO-225ENST00000622017 HNRNPUQ00839 825 aaKnown RBP eCLIP18.45■□□□□ 0.54
TRO-225ENST00000622017 KCNH5Q8NCM2 988 aa18.45■□□□□ 0.54
TRO-225ENST00000622017 COG3Q96JB2 828 aa18.45■□□□□ 0.54
TRO-225ENST00000622017 PIK3C2AO00443 1686 aa18.44■□□□□ 0.54
TRO-225ENST00000622017 NRKQ7Z2Y5 1582 aa18.44■□□□□ 0.54
TRO-225ENST00000622017 ZNF772Q68DY9 489 aaPredicted RBP18.44■□□□□ 0.54
TRO-225ENST00000622017 ZRANB1Q9UGI0 708 aa18.44■□□□□ 0.54
TRO-225ENST00000622017 AFF2P51816 1311 aa18.43■□□□□ 0.54
TRO-225ENST00000622017 FYB1O15117 783 aa18.43■□□□□ 0.54
TRO-225ENST00000622017 PRDM11Q9NQV5 511 aa18.43■□□□□ 0.54
TRO-225ENST00000622017 ABCA3Q99758 1704 aa18.43■□□□□ 0.54
TRO-225ENST00000622017 USP21Q9UK80 565 aa18.42■□□□□ 0.54
TRO-225ENST00000622017 PHRF1Q9P1Y6 1649 aaKnown RBP18.41■□□□□ 0.54
TRO-225ENST00000622017 FAM83GA6ND36 823 aa18.41■□□□□ 0.54
TRO-225ENST00000622017 GGNBP2Q9H3C7 697 aa18.41■□□□□ 0.54
TRO-225ENST00000622017 INSRP06213 1382 aa18.41■□□□□ 0.54
TRO-225ENST00000622017 USP19O94966 1318 aa18.41■□□□□ 0.54
TRO-225ENST00000622017 ANKRD26Q9UPS8 1709 aa18.4■□□□□ 0.54
TRO-225ENST00000622017 CRYBG1Q9Y4K1 1723 aa18.4■□□□□ 0.54
TRO-225ENST00000622017 CHRNA2Q15822 529 aa18.4■□□□□ 0.54
TRO-225ENST00000622017 USP31Q70CQ4 1352 aa18.39■□□□□ 0.54
TRO-225ENST00000622017 KIAA0232Q92628 1395 aa18.39■□□□□ 0.54
TRO-225ENST00000622017 KIF20BQ96Q89 1820 aa18.39■□□□□ 0.53
TRO-225ENST00000622017 EVA1CP58658 441 aa18.38■□□□□ 0.53
TRO-225ENST00000622017 FNBP4Q8N3X1 1017 aaPredicted RBP18.38■□□□□ 0.53
TRO-225ENST00000622017 QTRT2Q9H974 415 aaKnown RBP18.38■□□□□ 0.53
TRO-225ENST00000622017 BTG4Q9NY30 223 aa18.38■□□□□ 0.53
TRO-225ENST00000622017 CCDC9Q9Y3X0 531 aaKnown RBP18.37■□□□□ 0.53
TRO-225ENST00000622017 TNNT2P45379 298 aaPredicted RBP18.36■□□□□ 0.53
TRO-225ENST00000622017 UNC5CLQ8IV45 518 aa18.36■□□□□ 0.53
TRO-225ENST00000622017 RGS17Q9UGC6 210 aaPredicted RBP18.36■□□□□ 0.53
TRO-225ENST00000622017 ZBED9Q6R2W3 1325 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms