RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 HDGFL2Q7Z4V5 671 aaPredicted RBP15.14■□□□□ 0.01
POLR2J3-221ENST00000621093 ILDR1Q86SU0 546 aaPredicted RBP15.14■□□□□ 0.01
POLR2J3-221ENST00000621093 TERF2IPQ9NYB0 399 aa15.14■□□□□ 0.01
POLR2J3-221ENST00000621093 ZNF316A6NFI3 1004 aaPredicted RBP15.13■□□□□ 0.01
POLR2J3-221ENST00000621093 PAK3O75914 559 aaPredicted RBP15.13■□□□□ 0.01
POLR2J3-221ENST00000621093 TNS3Q68CZ2 1445 aa15.13■□□□□ 0.01
POLR2J3-221ENST00000621093 ABCA3Q99758 1704 aa15.13■□□□□ 0.01
POLR2J3-221ENST00000621093 ZNF692Q9BU19 519 aaPredicted RBP15.13■□□□□ 0.01
POLR2J3-221ENST00000621093 CARD14Q9BXL6 1004 aa15.13■□□□□ 0.01
POLR2J3-221ENST00000621093 PANK3Q9H999 370 aa15.13■□□□□ 0.01
POLR2J3-221ENST00000621093 CRYBG1Q9Y4K1 1723 aa15.13■□□□□ 0.01
POLR2J3-221ENST00000621093 SBNO1A3KN83 1393 aa15.12■□□□□ 0.01
POLR2J3-221ENST00000621093 SPATA31A3Q5VYP0 1347 aa15.12■□□□□ 0.01
POLR2J3-221ENST00000621093 TTC21BQ7Z4L5 1316 aa15.12■□□□□ 0.01
POLR2J3-221ENST00000621093 COL22A1Q8NFW1 1626 aaPredicted RBP15.11■□□□□ 0.01
POLR2J3-221ENST00000621093 PLEKHG5O94827 1062 aa15.11■□□□□ 0.01
POLR2J3-221ENST00000621093 NUTM2GQ5VZR2 741 aa15.11■□□□□ 0.01
POLR2J3-221ENST00000621093 LMOD2Q6P5Q4 547 aa15.11■□□□□ 0.01
POLR2J3-221ENST00000621093 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.11■□□□□ 0.01
POLR2J3-221ENST00000621093 EDC4Q6P2E9 1401 aaKnown RBP15.1■□□□□ 0.01
POLR2J3-221ENST00000621093 NSD3Q9BZ95 1437 aa15.1■□□□□ 0.01
POLR2J3-221ENST00000621093 LRRC59Q96AG4 307 aaKnown RBP15.1■□□□□ 0.01
POLR2J3-221ENST00000621093 ZRANB1Q9UGI0 708 aa15.1■□□□□ 0.01
POLR2J3-221ENST00000621093 PNPLA6Q8IY17 1366 aa15.1■□□□□ 0.01
POLR2J3-221ENST00000621093 PHRF1Q9P1Y6 1649 aaKnown RBP15.1■□□□□ 0.01
POLR2J3-221ENST00000621093 MED1Q15648 1581 aaPredicted RBP15.09■□□□□ 0.01
POLR2J3-221ENST00000621093 USP54Q70EL1 1684 aa15.09■□□□□ 0.01
POLR2J3-221ENST00000621093 ANKRD26Q9UPS8 1709 aa15.09■□□□□ 0.01
POLR2J3-221ENST00000621093 NME9Q86XW9 330 aa15.08■□□□□ 0
POLR2J3-221ENST00000621093 BRD4O60885 1362 aaPredicted RBP15.08■□□□□ 0
POLR2J3-221ENST00000621093 DDX10Q13206 875 aaKnown RBP15.07■□□□□ 0
POLR2J3-221ENST00000621093 ABTB2Q8N961 1025 aa15.07■□□□□ 0
POLR2J3-221ENST00000621093 JCADQ9P266 1359 aa15.07■□□□□ 0
POLR2J3-221ENST00000621093 CABLES1Q8TDN4 633 aa15.06■□□□□ 0
POLR2J3-221ENST00000621093 TTC21AQ8NDW8 1320 aa15.06■□□□□ 0
POLR2J3-221ENST00000621093 PER1O15534 1290 aaPredicted RBP15.05■□□□□ -0
POLR2J3-221ENST00000621093 ARHGEF10O15013 1369 aa15.05■□□□□ -0
POLR2J3-221ENST00000621093 FYB1O15117 783 aa15.04■□□□□ -0
POLR2J3-221ENST00000621093 NLRP6P59044 892 aa15.04■□□□□ -0
POLR2J3-221ENST00000621093 GGNBP2Q9H3C7 697 aa15.04■□□□□ -0
POLR2J3-221ENST00000621093 NUTM2BA6NNL0 878 aaPredicted RBP15.03■□□□□ -0
POLR2J3-221ENST00000621093 NUTM2EB1AL46 878 aaPredicted RBP15.03■□□□□ -0
POLR2J3-221ENST00000621093 NUTM2AQ8IVF1 878 aaPredicted RBP15.03■□□□□ -0
POLR2J3-221ENST00000621093 LRP6O75581 1613 aa15.03■□□□□ -0
POLR2J3-221ENST00000621093 SLIT3O75094 1523 aa15.02■□□□□ -0
POLR2J3-221ENST00000621093 OVOS2A0A0J9YW53 1432 aa15.02■□□□□ -0
POLR2J3-221ENST00000621093 OVOS2Q6IE36 1432 aa15.02■□□□□ -0
POLR2J3-221ENST00000621093 USP31Q70CQ4 1352 aa15.02■□□□□ -0
POLR2J3-221ENST00000621093 CNGB1Q14028 1251 aaPredicted RBP15.02■□□□□ -0
POLR2J3-221ENST00000621093 LTN1O94822 1766 aa15.02□□□□□ -0.01
POLR2J3-221ENST00000621093 USP19O94966 1318 aa15.01□□□□□ -0.01
POLR2J3-221ENST00000621093 NLRP13Q86W25 1043 aa15.01□□□□□ -0.01
POLR2J3-221ENST00000621093 KNSTRNQ9Y448 316 aa15.01□□□□□ -0.01
POLR2J3-221ENST00000621093 MAP2P11137 1827 aaKnown RBP15.01□□□□□ -0.01
POLR2J3-221ENST00000621093 RGPD5Q99666 1765 aa15.01□□□□□ -0.01
POLR2J3-221ENST00000621093 SOX12O15370 315 aa15□□□□□ -0.01
POLR2J3-221ENST00000621093 AMER1Q5JTC6 1135 aaPredicted RBP15□□□□□ -0.01
POLR2J3-221ENST00000621093 CGNL1Q0VF96 1302 aa14.99□□□□□ -0.01
POLR2J3-221ENST00000621093 NFAT5O94916 1531 aa14.99□□□□□ -0.01
POLR2J3-221ENST00000621093 FBLN1P23142 703 aa14.99□□□□□ -0.01
POLR2J3-221ENST00000621093 SPATA31A6Q5VVP1 1343 aa14.98□□□□□ -0.01
POLR2J3-221ENST00000621093 CC2D1BQ5T0F9 858 aaKnown RBP14.98□□□□□ -0.01
POLR2J3-221ENST00000621093 COG3Q96JB2 828 aa14.98□□□□□ -0.01
POLR2J3-221ENST00000621093 PLCH1Q4KWH8 1693 aa14.97□□□□□ -0.01
POLR2J3-221ENST00000621093 ADAMTS2O95450 1211 aa14.97□□□□□ -0.01
POLR2J3-221ENST00000621093 HAP1P54257 671 aaPredicted RBP14.97□□□□□ -0.01
POLR2J3-221ENST00000621093 COL18A1P39060 1754 aa14.96□□□□□ -0.01
POLR2J3-221ENST00000621093 GCP02774 474 aa14.96□□□□□ -0.01
POLR2J3-221ENST00000621093 ZC3H6P61129 1189 aaKnown RBP14.96□□□□□ -0.01
POLR2J3-221ENST00000621093 PEAK1Q9H792 1746 aa14.95□□□□□ -0.02
POLR2J3-221ENST00000621093 ZBTB7CA1YPR0 619 aa14.95□□□□□ -0.02
POLR2J3-221ENST00000621093 NSD2O96028 1365 aa14.95□□□□□ -0.02
POLR2J3-221ENST00000621093 COL14A1Q05707 1796 aaKnown RBP14.94□□□□□ -0.02
POLR2J3-221ENST00000621093 TNNT2P45379 298 aaPredicted RBP14.94□□□□□ -0.02
POLR2J3-221ENST00000621093 KIAA0232Q92628 1395 aa14.94□□□□□ -0.02
POLR2J3-221ENST00000621093 CHRNA2Q15822 529 aa14.93□□□□□ -0.02
POLR2J3-221ENST00000621093 MORC1Q86VD1 984 aa14.93□□□□□ -0.02
POLR2J3-221ENST00000621093 NPC1L1Q9UHC9 1359 aa14.93□□□□□ -0.02
POLR2J3-221ENST00000621093 LMO7Q8WWI1 1683 aa14.93□□□□□ -0.02
POLR2J3-221ENST00000621093 NRAPQ86VF7 1730 aa14.92□□□□□ -0.02
POLR2J3-221ENST00000621093 KCNH5Q8NCM2 988 aa14.92□□□□□ -0.02
POLR2J3-221ENST00000621093 FAM83GA6ND36 823 aa14.91□□□□□ -0.02
POLR2J3-221ENST00000621093 RRS1Q15050 365 aaKnown RBP14.91□□□□□ -0.02
POLR2J3-221ENST00000621093 MEX3CQ5U5Q3 659 aaKnown RBP14.91□□□□□ -0.02
POLR2J3-221ENST00000621093 C8orf37Q96NL8 207 aa14.91□□□□□ -0.02
POLR2J3-221ENST00000621093 NWD2Q9ULI1 1742 aa14.91□□□□□ -0.02
POLR2J3-221ENST00000621093 RGPD2P0DJD1 1756 aa14.9□□□□□ -0.02
POLR2J3-221ENST00000621093 CPDO75976 1380 aa14.9□□□□□ -0.02
POLR2J3-221ENST00000621093 ARHGEF25Q86VW2 580 aa14.9□□□□□ -0.02
POLR2J3-221ENST00000621093 PRDM11Q9NQV5 511 aa14.9□□□□□ -0.02
POLR2J3-221ENST00000621093 EMILIN1Q9Y6C2 1016 aa14.89□□□□□ -0.03
POLR2J3-221ENST00000621093 CAMTA1Q9Y6Y1 1673 aa14.89□□□□□ -0.03
POLR2J3-221ENST00000621093 MAP3K19Q56UN5 1328 aa14.89□□□□□ -0.03
POLR2J3-221ENST00000621093 SLIT2O94813 1529 aa14.87□□□□□ -0.03
POLR2J3-221ENST00000621093 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.87□□□□□ -0.03
POLR2J3-221ENST00000621093 NGLY1Q96IV0 654 aa14.87□□□□□ -0.03
POLR2J3-221ENST00000621093 POLKQ9UBT6 870 aa14.87□□□□□ -0.03
POLR2J3-221ENST00000621093 AXIN2Q9Y2T1 843 aa14.87□□□□□ -0.03
POLR2J3-221ENST00000621093 AATKQ6ZMQ8 1374 aa14.86□□□□□ -0.03
POLR2J3-221ENST00000621093 PARD3Q8TEW0 1356 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 211.9 ms