RNA–Protein interactions for RNA: ENST00000621008.1

PCDHGC3-206, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 2

Gene PCDHGC3, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-206ENST00000621008 PAK3O75914 559 aaPredicted RBP18.08■□□□□ 0.48
PCDHGC3-206ENST00000621008 TERF2IPQ9NYB0 399 aa18.08■□□□□ 0.48
PCDHGC3-206ENST00000621008 AKAP12Q02952 1782 aa18.08■□□□□ 0.48
PCDHGC3-206ENST00000621008 TTC21AQ8NDW8 1320 aa18.07■□□□□ 0.48
PCDHGC3-206ENST00000621008 HDGFL2Q7Z4V5 671 aaPredicted RBP18.07■□□□□ 0.48
PCDHGC3-206ENST00000621008 HAP1P54257 671 aaPredicted RBP18.06■□□□□ 0.48
PCDHGC3-206ENST00000621008 LMOD2Q6P5Q4 547 aa18.06■□□□□ 0.48
PCDHGC3-206ENST00000621008 SSH2Q76I76 1423 aa18.06■□□□□ 0.48
PCDHGC3-206ENST00000621008 NLRP13Q86W25 1043 aa18.05■□□□□ 0.48
PCDHGC3-206ENST00000621008 FNBP4Q8N3X1 1017 aaPredicted RBP18.05■□□□□ 0.48
PCDHGC3-206ENST00000621008 ABTB2Q8N961 1025 aa18.04■□□□□ 0.48
PCDHGC3-206ENST00000621008 NGLY1Q96IV0 654 aa18.04■□□□□ 0.48
PCDHGC3-206ENST00000621008 KTN1Q86UP2 1357 aaKnown RBP18.04■□□□□ 0.48
PCDHGC3-206ENST00000621008 C8orf37Q96NL8 207 aa18.03■□□□□ 0.48
PCDHGC3-206ENST00000621008 RGS17Q9UGC6 210 aaPredicted RBP18.03■□□□□ 0.48
PCDHGC3-206ENST00000621008 MON2Q7Z3U7 1717 aa18.03■□□□□ 0.48
PCDHGC3-206ENST00000621008 ABCA3Q99758 1704 aa18.03■□□□□ 0.48
PCDHGC3-206ENST00000621008 ADAMTS2O95450 1211 aa18.02■□□□□ 0.48
PCDHGC3-206ENST00000621008 TMC1Q8TDI8 760 aa18.02■□□□□ 0.48
PCDHGC3-206ENST00000621008 AFF2P51816 1311 aa18.01■□□□□ 0.47
PCDHGC3-206ENST00000621008 CRYBG1Q9Y4K1 1723 aa18.01■□□□□ 0.47
PCDHGC3-206ENST00000621008 USP19O94966 1318 aa18■□□□□ 0.47
PCDHGC3-206ENST00000621008 TTC21BQ7Z4L5 1316 aa18■□□□□ 0.47
PCDHGC3-206ENST00000621008 EDC4Q6P2E9 1401 aaKnown RBP18■□□□□ 0.47
PCDHGC3-206ENST00000621008 NWD2Q9ULI1 1742 aa18■□□□□ 0.47
PCDHGC3-206ENST00000621008 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.99■□□□□ 0.47
PCDHGC3-206ENST00000621008 SLC12A5Q9H2X9 1139 aa17.99■□□□□ 0.47
PCDHGC3-206ENST00000621008 ANKRD36BQ8N2N9 1353 aa17.99■□□□□ 0.47
PCDHGC3-206ENST00000621008 CD163L1Q9NR16 1453 aa17.99■□□□□ 0.47
PCDHGC3-206ENST00000621008 NRKQ7Z2Y5 1582 aa17.99■□□□□ 0.47
PCDHGC3-206ENST00000621008 HSPA5P11021 654 aaKnown RBP17.98■□□□□ 0.47
PCDHGC3-206ENST00000621008 USP21Q9UK80 565 aa17.98■□□□□ 0.47
PCDHGC3-206ENST00000621008 TRPC5Q9UL62 973 aaPredicted RBP17.98■□□□□ 0.47
PCDHGC3-206ENST00000621008 SLIT2O94813 1529 aa17.98■□□□□ 0.47
PCDHGC3-206ENST00000621008 COL14A1Q05707 1796 aaKnown RBP17.97■□□□□ 0.47
PCDHGC3-206ENST00000621008 CPDO75976 1380 aa17.97■□□□□ 0.47
PCDHGC3-206ENST00000621008 USP31Q70CQ4 1352 aa17.97■□□□□ 0.47
PCDHGC3-206ENST00000621008 NLRP6P59044 892 aa17.97■□□□□ 0.47
PCDHGC3-206ENST00000621008 KCNH5Q8NCM2 988 aa17.97■□□□□ 0.47
PCDHGC3-206ENST00000621008 PHRF1Q9P1Y6 1649 aaKnown RBP17.97■□□□□ 0.47
PCDHGC3-206ENST00000621008 USP54Q70EL1 1684 aa17.96■□□□□ 0.47
PCDHGC3-206ENST00000621008 CDK12Q9NYV4 1490 aaPredicted RBP17.96■□□□□ 0.47
PCDHGC3-206ENST00000621008 A0A1W2PP64 1363 aa17.96■□□□□ 0.47
PCDHGC3-206ENST00000621008 CABLES1Q8TDN4 633 aa17.96■□□□□ 0.47
PCDHGC3-206ENST00000621008 RXRBP28702 533 aa17.95■□□□□ 0.46
PCDHGC3-206ENST00000621008 RBM6P78332 1123 aaKnown RBP17.95■□□□□ 0.46
PCDHGC3-206ENST00000621008 POTEAQ6S8J7 498 aa17.95■□□□□ 0.46
PCDHGC3-206ENST00000621008 UNC5CLQ8IV45 518 aa17.95■□□□□ 0.46
PCDHGC3-206ENST00000621008 QTRT2Q9H974 415 aaKnown RBP17.95■□□□□ 0.46
PCDHGC3-206ENST00000621008 BCL9LQ86UU0 1499 aa17.95■□□□□ 0.46
PCDHGC3-206ENST00000621008 SLIT3O75094 1523 aa17.94■□□□□ 0.46
PCDHGC3-206ENST00000621008 PIK3C2AO00443 1686 aa17.94■□□□□ 0.46
PCDHGC3-206ENST00000621008 GCP02774 474 aa17.94■□□□□ 0.46
PCDHGC3-206ENST00000621008 ATRNO75882 1429 aa17.93■□□□□ 0.46
PCDHGC3-206ENST00000621008 FAM83GA6ND36 823 aa17.93■□□□□ 0.46
PCDHGC3-206ENST00000621008 PRDM11Q9NQV5 511 aa17.92■□□□□ 0.46
PCDHGC3-206ENST00000621008 PLCH1Q4KWH8 1693 aa17.91■□□□□ 0.46
PCDHGC3-206ENST00000621008 ABCC6O95255 1503 aa17.9■□□□□ 0.46
PCDHGC3-206ENST00000621008 VPS72Q15906 364 aa17.9■□□□□ 0.46
PCDHGC3-206ENST00000621008 NUTM2GQ5VZR2 741 aa17.9■□□□□ 0.46
PCDHGC3-206ENST00000621008 ILDR2Q71H61 639 aa17.9■□□□□ 0.46
PCDHGC3-206ENST00000621008 KIAA0232Q92628 1395 aa17.9■□□□□ 0.46
PCDHGC3-206ENST00000621008 MYOM1P52179 1685 aa17.89■□□□□ 0.45
PCDHGC3-206ENST00000621008 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.88■□□□□ 0.45
PCDHGC3-206ENST00000621008 GJD4Q96KN9 370 aaPredicted RBP17.88■□□□□ 0.45
PCDHGC3-206ENST00000621008 AATKQ6ZMQ8 1374 aa17.88■□□□□ 0.45
PCDHGC3-206ENST00000621008 ZEB1P37275 1124 aaPredicted RBP17.87■□□□□ 0.45
PCDHGC3-206ENST00000621008 BTG4Q9NY30 223 aa17.87■□□□□ 0.45
PCDHGC3-206ENST00000621008 ZC3H6P61129 1189 aaKnown RBP17.86■□□□□ 0.45
PCDHGC3-206ENST00000621008 COG3Q96JB2 828 aa17.86■□□□□ 0.45
PCDHGC3-206ENST00000621008 NRAPQ86VF7 1730 aa17.86■□□□□ 0.45
PCDHGC3-206ENST00000621008 OVOS2A0A0J9YW53 1432 aa17.85■□□□□ 0.45
PCDHGC3-206ENST00000621008 OVOS2Q6IE36 1432 aa17.85■□□□□ 0.45
PCDHGC3-206ENST00000621008 ARHGEF25Q86VW2 580 aa17.85■□□□□ 0.45
PCDHGC3-206ENST00000621008 LMO7Q8WWI1 1683 aa17.84■□□□□ 0.45
PCDHGC3-206ENST00000621008 SOCS7O14512 581 aa17.84■□□□□ 0.45
PCDHGC3-206ENST00000621008 PLEKHG5O94827 1062 aa17.84■□□□□ 0.45
PCDHGC3-206ENST00000621008 NME9Q86XW9 330 aa17.84■□□□□ 0.45
PCDHGC3-206ENST00000621008 NFAT5O94916 1531 aa17.83■□□□□ 0.45
PCDHGC3-206ENST00000621008 CGNL1Q0VF96 1302 aa17.83■□□□□ 0.44
PCDHGC3-206ENST00000621008 ONECUT3O60422 494 aaPredicted RBP17.83■□□□□ 0.44
PCDHGC3-206ENST00000621008 FYB1O15117 783 aa17.82■□□□□ 0.44
PCDHGC3-206ENST00000621008 EVA1CP58658 441 aa17.81■□□□□ 0.44
PCDHGC3-206ENST00000621008 THRAP3Q9Y2W1 955 aaKnown RBP17.81■□□□□ 0.44
PCDHGC3-206ENST00000621008 KIF20BQ96Q89 1820 aa17.81■□□□□ 0.44
PCDHGC3-206ENST00000621008 NSD2O96028 1365 aa17.8■□□□□ 0.44
PCDHGC3-206ENST00000621008 SPATA31A5Q5VU36 1347 aa17.8■□□□□ 0.44
PCDHGC3-206ENST00000621008 SPATA31A7Q8IWB4 1347 aa17.8■□□□□ 0.44
PCDHGC3-206ENST00000621008 CARD14Q9BXL6 1004 aa17.8■□□□□ 0.44
PCDHGC3-206ENST00000621008 COL18A1P39060 1754 aa17.8■□□□□ 0.44
PCDHGC3-206ENST00000621008 CAMTA1Q9Y6Y1 1673 aa17.8■□□□□ 0.44
PCDHGC3-206ENST00000621008 NSD3Q9BZ95 1437 aa17.8■□□□□ 0.44
PCDHGC3-206ENST00000621008 KIF7Q2M1P5 1343 aa17.79■□□□□ 0.44
PCDHGC3-206ENST00000621008 CHRNA2Q15822 529 aa17.79■□□□□ 0.44
PCDHGC3-206ENST00000621008 GLI3P10071 1580 aa17.79■□□□□ 0.44
PCDHGC3-206ENST00000621008 KIF24Q5T7B8 1368 aa17.79■□□□□ 0.44
PCDHGC3-206ENST00000621008 POLR3GLQ9BT43 218 aa17.78■□□□□ 0.44
PCDHGC3-206ENST00000621008 CCDC9Q9Y3X0 531 aaKnown RBP17.78■□□□□ 0.44
PCDHGC3-206ENST00000621008 COL5A2P05997 1499 aaPredicted RBP17.77■□□□□ 0.44
PCDHGC3-206ENST00000621008 C11orf95C9JLR9 678 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms