RNA–Protein interactions for RNA: ENST00000620847.1

GDNF-208, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,638 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-208ENST00000620847 YTHDC2Q9H6S0 1430 aaKnown RBP10.35□□□□□ -0.75
GDNF-208ENST00000620847 SEC24BO95487 1268 aa10.34□□□□□ -0.75
GDNF-208ENST00000620847 SRPK2P78362 688 aaKnown RBP10.34□□□□□ -0.75
GDNF-208ENST00000620847 STK26Q9P289 416 aa10.34□□□□□ -0.75
GDNF-208ENST00000620847 FRAT2O75474 233 aaPredicted RBP10.34□□□□□ -0.75
GDNF-208ENST00000620847 MVPQ14764 893 aaKnown RBP10.34□□□□□ -0.75
GDNF-208ENST00000620847 ALKQ9UM73 1620 aa10.34□□□□□ -0.75
GDNF-208ENST00000620847 FYB1O15117 783 aa10.33□□□□□ -0.76
GDNF-208ENST00000620847 GGNBP2Q9H3C7 697 aa10.33□□□□□ -0.76
GDNF-208ENST00000620847 TMPOP42166 694 aaKnown RBP10.33□□□□□ -0.76
GDNF-208ENST00000620847 TRIM35Q9UPQ4 493 aa10.33□□□□□ -0.76
GDNF-208ENST00000620847 ZKSCAN2Q63HK3 967 aa10.33□□□□□ -0.76
GDNF-208ENST00000620847 RWDD1Q9H446 243 aaPredicted RBP10.33□□□□□ -0.76
GDNF-208ENST00000620847 TERF2IPQ9NYB0 399 aa10.33□□□□□ -0.76
GDNF-208ENST00000620847 PRAM1Q96QH2 718 aa10.32□□□□□ -0.76
GDNF-208ENST00000620847 PDZRN3Q9UPQ7 1066 aa10.32□□□□□ -0.76
GDNF-208ENST00000620847 ARHGEF40Q8TER5 1519 aa10.32□□□□□ -0.76
GDNF-208ENST00000620847 TSR2Q969E8 191 aaKnown RBP10.32□□□□□ -0.76
GDNF-208ENST00000620847 PNPLA6Q8IY17 1366 aa10.32□□□□□ -0.76
GDNF-208ENST00000620847 CDC42BPGQ6DT37 1551 aa10.32□□□□□ -0.76
GDNF-208ENST00000620847 IL16Q14005 1332 aa10.32□□□□□ -0.76
GDNF-208ENST00000620847 MINK1Q8N4C8 1332 aaPredicted RBP10.32□□□□□ -0.76
GDNF-208ENST00000620847 U2SURPO15042 1029 aaKnown RBP10.31□□□□□ -0.76
GDNF-208ENST00000620847 DZIP1LQ8IYY4 767 aaKnown RBP10.31□□□□□ -0.76
GDNF-208ENST00000620847 EXOSC9Q06265 439 aaKnown RBP10.31□□□□□ -0.76
GDNF-208ENST00000620847 SETD1AO15047 1707 aaKnown RBP10.3□□□□□ -0.76
GDNF-208ENST00000620847 POGKQ9P215 609 aa10.3□□□□□ -0.76
GDNF-208ENST00000620847 FTSJ3Q8IY81 847 aaKnown RBP10.3□□□□□ -0.76
GDNF-208ENST00000620847 SENP3Q9H4L4 574 aaPredicted RBP10.3□□□□□ -0.76
GDNF-208ENST00000620847 DLC1Q96QB1 1528 aa10.29□□□□□ -0.76
GDNF-208ENST00000620847 TRIM27P14373 513 aa10.29□□□□□ -0.76
GDNF-208ENST00000620847 SMC4Q9NTJ3 1288 aa10.29□□□□□ -0.76
GDNF-208ENST00000620847 GLIPR1L2Q4G1C9 344 aa10.29□□□□□ -0.76
GDNF-208ENST00000620847 HDGFL2Q7Z4V5 671 aaPredicted RBP10.29□□□□□ -0.76
GDNF-208ENST00000620847 SSH1Q8WYL5 1049 aa10.29□□□□□ -0.76
GDNF-208ENST00000620847 CDK19Q9BWU1 502 aa10.29□□□□□ -0.76
GDNF-208ENST00000620847 DIAPH1O60610 1272 aaKnown RBP10.28□□□□□ -0.76
GDNF-208ENST00000620847 FBXO31Q5XUX0 539 aaPredicted RBP10.28□□□□□ -0.76
GDNF-208ENST00000620847 LRRC7Q96NW7 1537 aa10.28□□□□□ -0.76
GDNF-208ENST00000620847 TBC1D32Q96NH3 1257 aa10.28□□□□□ -0.76
GDNF-208ENST00000620847 RIMBP3CA6NJZ7 1639 aa10.28□□□□□ -0.76
GDNF-208ENST00000620847 RIMBP3BA6NNM3 1639 aa10.28□□□□□ -0.76
GDNF-208ENST00000620847 RIMBP3Q9UFD9 1639 aa10.28□□□□□ -0.76
GDNF-208ENST00000620847 REREQ9P2R6 1566 aa10.28□□□□□ -0.76
GDNF-208ENST00000620847 RIPK4P57078 832 aa10.28□□□□□ -0.76
GDNF-208ENST00000620847 HDAC1Q13547 482 aaPredicted RBP10.28□□□□□ -0.76
GDNF-208ENST00000620847 BECN1Q14457 450 aa10.28□□□□□ -0.76
GDNF-208ENST00000620847 ATF7IPQ6VMQ6 1270 aa10.28□□□□□ -0.76
GDNF-208ENST00000620847 PNNQ9H307 717 aaKnown RBP10.28□□□□□ -0.76
GDNF-208ENST00000620847 MAP2P11137 1827 aaKnown RBP10.28□□□□□ -0.76
GDNF-208ENST00000620847 L1TD1Q5T7N2 865 aaKnown RBP10.27□□□□□ -0.76
GDNF-208ENST00000620847 DDX19BQ9UMR2 479 aa10.27□□□□□ -0.76
GDNF-208ENST00000620847 ATP7BP35670 1465 aa10.27□□□□□ -0.76
GDNF-208ENST00000620847 DNAJC5Q9H3Z4 198 aa10.27□□□□□ -0.77
GDNF-208ENST00000620847 CABP1Q9NZU7 370 aa10.27□□□□□ -0.77
GDNF-208ENST00000620847 UPF2Q9HAU5 1272 aaKnown RBP10.26□□□□□ -0.77
GDNF-208ENST00000620847 NOB1Q9ULX3 412 aaKnown RBP10.26□□□□□ -0.77
GDNF-208ENST00000620847 FAM135BQ49AJ0 1406 aa10.26□□□□□ -0.77
GDNF-208ENST00000620847 FCHSD2O94868 740 aa10.26□□□□□ -0.77
GDNF-208ENST00000620847 AGLP35573 1532 aa10.26□□□□□ -0.77
GDNF-208ENST00000620847 SPATA31D1Q6ZQQ2 1576 aa10.26□□□□□ -0.77
GDNF-208ENST00000620847 A2ML1A8K2U0 1454 aa10.26□□□□□ -0.77
GDNF-208ENST00000620847 PPIP5K1Q6PFW1 1433 aa10.25□□□□□ -0.77
GDNF-208ENST00000620847 ITPRIPQ8IWB1 547 aa10.25□□□□□ -0.77
GDNF-208ENST00000620847 ALDH1L2Q3SY69 923 aa10.25□□□□□ -0.77
GDNF-208ENST00000620847 ANTXR1Q9H6X2 564 aa10.25□□□□□ -0.77
GDNF-208ENST00000620847 KIF16BQ96L93 1317 aa10.24□□□□□ -0.77
GDNF-208ENST00000620847 SMC5Q8IY18 1101 aa10.24□□□□□ -0.77
GDNF-208ENST00000620847 TMEM57Q8N5G2 664 aa10.24□□□□□ -0.77
GDNF-208ENST00000620847 ZBTB40Q9NUA8 1239 aa10.24□□□□□ -0.77
GDNF-208ENST00000620847 POLKQ9UBT6 870 aa10.24□□□□□ -0.77
GDNF-208ENST00000620847 TRHP20396 242 aaPredicted RBP10.24□□□□□ -0.77
GDNF-208ENST00000620847 NRXN3Q9Y4C0 1643 aa10.24□□□□□ -0.77
GDNF-208ENST00000620847 PPP6R1Q9UPN7 881 aa10.24□□□□□ -0.77
GDNF-208ENST00000620847 IPO8O15397 1037 aaKnown RBP10.23□□□□□ -0.77
GDNF-208ENST00000620847 BRPF1P55201 1214 aaPredicted RBP10.23□□□□□ -0.77
GDNF-208ENST00000620847 DIP2BQ9P265 1576 aa10.23□□□□□ -0.77
GDNF-208ENST00000620847 TBC1D2Q9BYX2 928 aa10.23□□□□□ -0.77
GDNF-208ENST00000620847 STAG3Q9UJ98 1225 aa10.23□□□□□ -0.77
GDNF-208ENST00000620847 CPSF1Q10570 1443 aaKnown RBP10.23□□□□□ -0.77
GDNF-208ENST00000620847 PRKAR2BP31323 418 aa10.22□□□□□ -0.77
GDNF-208ENST00000620847 CYB5RLQ6IPT4 315 aa10.22□□□□□ -0.77
GDNF-208ENST00000620847 WAPLQ7Z5K2 1190 aa10.22□□□□□ -0.77
GDNF-208ENST00000620847 RIMS2Q9UQ26 1411 aa10.22□□□□□ -0.77
GDNF-208ENST00000620847 ZNF428Q96B54 188 aa10.22□□□□□ -0.77
GDNF-208ENST00000620847 DLG5Q8TDM6 1919 aa10.22□□□□□ -0.77
GDNF-208ENST00000620847 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.22□□□□□ -0.77
GDNF-208ENST00000620847 MON2Q7Z3U7 1717 aa10.21□□□□□ -0.77
GDNF-208ENST00000620847 SLKQ9H2G2 1235 aaPredicted RBP10.21□□□□□ -0.77
GDNF-208ENST00000620847 TSPOAP1O95153 1857 aa10.21□□□□□ -0.77
GDNF-208ENST00000620847 EDC4Q6P2E9 1401 aaKnown RBP10.21□□□□□ -0.77
GDNF-208ENST00000620847 FBLN1P23142 703 aa10.21□□□□□ -0.77
GDNF-208ENST00000620847 CDK12Q9NYV4 1490 aaPredicted RBP10.21□□□□□ -0.78
GDNF-208ENST00000620847 KNDC1Q76NI1 1749 aa10.21□□□□□ -0.78
GDNF-208ENST00000620847 NFE2L2Q16236 605 aa10.2□□□□□ -0.78
GDNF-208ENST00000620847 PHACTR3Q96KR7 559 aa10.2□□□□□ -0.78
GDNF-208ENST00000620847 AKAP12Q02952 1782 aa10.2□□□□□ -0.78
GDNF-208ENST00000620847 NUCB1Q02818 461 aa10.2□□□□□ -0.78
GDNF-208ENST00000620847 C22orf23Q9BZE7 217 aa10.2□□□□□ -0.78
GDNF-208ENST00000620847 RRAGDQ9NQL2 400 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms