RNA–Protein interactions for RNA: ENST00000619920.4

PSMC3-213, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-213ENST00000619920 RUNDC1Q96C34 613 aa20.25■□□□□ 0.83
PSMC3-213ENST00000619920 COG3Q96JB2 828 aa20.25■□□□□ 0.83
PSMC3-213ENST00000619920 RNF123Q5XPI4 1314 aa20.25■□□□□ 0.83
PSMC3-213ENST00000619920 USP6P35125 1406 aa20.24■□□□□ 0.83
PSMC3-213ENST00000619920 NKTRP30414 1462 aaKnown RBP20.24■□□□□ 0.83
PSMC3-213ENST00000619920 NUTM2FA1L443 756 aa20.24■□□□□ 0.83
PSMC3-213ENST00000619920 APAF1O14727 1248 aa20.24■□□□□ 0.83
PSMC3-213ENST00000619920 TTC21BQ7Z4L5 1316 aa20.24■□□□□ 0.83
PSMC3-213ENST00000619920 NCBP3Q53F19 620 aaKnown RBP20.23■□□□□ 0.83
PSMC3-213ENST00000619920 NRKQ7Z2Y5 1582 aa20.23■□□□□ 0.83
PSMC3-213ENST00000619920 FMN2Q9NZ56 1722 aa20.22■□□□□ 0.83
PSMC3-213ENST00000619920 CDCA7LQ96GN5 454 aa20.22■□□□□ 0.83
PSMC3-213ENST00000619920 SSH2Q76I76 1423 aa20.22■□□□□ 0.83
PSMC3-213ENST00000619920 POLKQ9UBT6 870 aa20.21■□□□□ 0.83
PSMC3-213ENST00000619920 TTC21AQ8NDW8 1320 aa20.21■□□□□ 0.83
PSMC3-213ENST00000619920 GOLGA2Q08379 1002 aa20.21■□□□□ 0.83
PSMC3-213ENST00000619920 NWD1Q149M9 1564 aa20.2■□□□□ 0.82
PSMC3-213ENST00000619920 DIAPH1O60610 1272 aaKnown RBP20.2■□□□□ 0.82
PSMC3-213ENST00000619920 U2AF1L5P0DN76 240 aaPredicted RBP20.2■□□□□ 0.82
PSMC3-213ENST00000619920 U2AF1Q01081 240 aaKnown RBP eCLIP20.2■□□□□ 0.82
PSMC3-213ENST00000619920 ADGRL3Q9HAR2 1447 aa20.19■□□□□ 0.82
PSMC3-213ENST00000619920 NGDNQ8NEJ9 315 aaKnown RBP20.18■□□□□ 0.82
PSMC3-213ENST00000619920 ZRANB1Q9UGI0 708 aa20.18■□□□□ 0.82
PSMC3-213ENST00000619920 NALCNQ8IZF0 1738 aa20.18■□□□□ 0.82
PSMC3-213ENST00000619920 PMFBP1Q8TBY8 1022 aa20.17■□□□□ 0.82
PSMC3-213ENST00000619920 RCAN3Q9UKA8 241 aa20.17■□□□□ 0.82
PSMC3-213ENST00000619920 IQSEC2Q5JU85 1478 aa20.17■□□□□ 0.82
PSMC3-213ENST00000619920 PNNQ9H307 717 aaKnown RBP20.17■□□□□ 0.82
PSMC3-213ENST00000619920 OVOS2A0A0J9YW53 1432 aa20.16■□□□□ 0.82
PSMC3-213ENST00000619920 OVOS2Q6IE36 1432 aa20.16■□□□□ 0.82
PSMC3-213ENST00000619920 CDK12Q9NYV4 1490 aaPredicted RBP20.16■□□□□ 0.82
PSMC3-213ENST00000619920 TCP11L2Q8N4U5 519 aa20.16■□□□□ 0.82
PSMC3-213ENST00000619920 RGPD8O14715 1765 aaPredicted RBP20.15■□□□□ 0.82
PSMC3-213ENST00000619920 MAP2P11137 1827 aaKnown RBP20.15■□□□□ 0.82
PSMC3-213ENST00000619920 SLFN5Q08AF3 891 aa20.15■□□□□ 0.82
PSMC3-213ENST00000619920 CCDC27Q2M243 656 aa20.15■□□□□ 0.82
PSMC3-213ENST00000619920 TRMT2AQ8IZ69 625 aaKnown RBP20.15■□□□□ 0.82
PSMC3-213ENST00000619920 U2SURPO15042 1029 aaKnown RBP20.14■□□□□ 0.81
PSMC3-213ENST00000619920 DUSP27Q5VZP5 1158 aa20.14■□□□□ 0.81
PSMC3-213ENST00000619920 PHF23Q9BUL5 403 aaPredicted RBP20.14■□□□□ 0.81
PSMC3-213ENST00000619920 USP31Q70CQ4 1352 aa20.14■□□□□ 0.81
PSMC3-213ENST00000619920 E9PSI1 815 aa20.13■□□□□ 0.81
PSMC3-213ENST00000619920 FBLN1P23142 703 aa20.12■□□□□ 0.81
PSMC3-213ENST00000619920 IRX6P78412 446 aaPredicted RBP20.12■□□□□ 0.81
PSMC3-213ENST00000619920 WWC1Q8IX03 1113 aa20.12■□□□□ 0.81
PSMC3-213ENST00000619920 PLEKHF1Q96S99 279 aa20.12■□□□□ 0.81
PSMC3-213ENST00000619920 PPM1GO15355 546 aaPredicted RBP20.12■□□□□ 0.81
PSMC3-213ENST00000619920 EMILIN1Q9Y6C2 1016 aa20.12■□□□□ 0.81
PSMC3-213ENST00000619920 KDM4FA0A1W2PPD8 638 aa20.11■□□□□ 0.81
PSMC3-213ENST00000619920 FCHSD2O94868 740 aa20.11■□□□□ 0.81
PSMC3-213ENST00000619920 PHF8Q9UPP1 1060 aa20.11■□□□□ 0.81
PSMC3-213ENST00000619920 PROSER2Q86WR7 435 aaPredicted RBP20.1■□□□□ 0.81
PSMC3-213ENST00000619920 WDR63Q8IWG1 891 aa20.1■□□□□ 0.81
PSMC3-213ENST00000619920 IL13P35225 146 aa20.09■□□□□ 0.81
PSMC3-213ENST00000619920 C14orf37Q86TY3 774 aa20.09■□□□□ 0.81
PSMC3-213ENST00000619920 RRP1P56182 461 aaKnown RBP20.08■□□□□ 0.81
PSMC3-213ENST00000619920 PELP1Q8IZL8 1130 aaKnown RBP20.08■□□□□ 0.81
PSMC3-213ENST00000619920 PPP4R2Q9NY27 417 aa20.08■□□□□ 0.81
PSMC3-213ENST00000619920 RRS1Q15050 365 aaKnown RBP20.08■□□□□ 0.8
PSMC3-213ENST00000619920 RBM33Q96EV2 1170 aaKnown RBP20.08■□□□□ 0.8
PSMC3-213ENST00000619920 MAPK8IP3Q9UPT6 1336 aa20.07■□□□□ 0.8
PSMC3-213ENST00000619920 NCOA3Q9Y6Q9 1424 aa20.06■□□□□ 0.8
PSMC3-213ENST00000619920 RRP7AQ9Y3A4 280 aaKnown RBP20.06■□□□□ 0.8
PSMC3-213ENST00000619920 LRRC7Q96NW7 1537 aa20.05■□□□□ 0.8
PSMC3-213ENST00000619920 NEUROD2Q15784 382 aa20.05■□□□□ 0.8
PSMC3-213ENST00000619920 RSPH6AQ9H0K4 717 aa20.05■□□□□ 0.8
PSMC3-213ENST00000619920 C19orf44Q9H6X5 657 aa20.05■□□□□ 0.8
PSMC3-213ENST00000619920 SPINK5Q9NQ38 1064 aaPredicted RBP20.05■□□□□ 0.8
PSMC3-213ENST00000619920 TMPOP42166 694 aaKnown RBP20.04■□□□□ 0.8
PSMC3-213ENST00000619920 PIK3C2AO00443 1686 aa20.04■□□□□ 0.8
PSMC3-213ENST00000619920 USP54Q70EL1 1684 aa20.04■□□□□ 0.8
PSMC3-213ENST00000619920 NEFMP07197 916 aa20.03■□□□□ 0.8
PSMC3-213ENST00000619920 HSPA2P54652 639 aa20.03■□□□□ 0.8
PSMC3-213ENST00000619920 ESCO1Q5FWF5 840 aa20.03■□□□□ 0.8
PSMC3-213ENST00000619920 DMRT2Q9Y5R5 561 aa20.03■□□□□ 0.8
PSMC3-213ENST00000619920 LMTK3Q96Q04 1460 aa20.03■□□□□ 0.8
PSMC3-213ENST00000619920 NLRP6P59044 892 aa20.02■□□□□ 0.8
PSMC3-213ENST00000619920 PRKAR2BP31323 418 aa20■□□□□ 0.79
PSMC3-213ENST00000619920 ABTB2Q8N961 1025 aa20■□□□□ 0.79
PSMC3-213ENST00000619920 SBNO1A3KN83 1393 aa20■□□□□ 0.79
PSMC3-213ENST00000619920 KIF24Q5T7B8 1368 aa20■□□□□ 0.79
PSMC3-213ENST00000619920 PSME1Q06323 249 aa20■□□□□ 0.79
PSMC3-213ENST00000619920 DCCP43146 1447 aa19.99■□□□□ 0.79
PSMC3-213ENST00000619920 MAP3K19Q56UN5 1328 aa19.99■□□□□ 0.79
PSMC3-213ENST00000619920 EIF4A2Q14240 407 aaKnown RBP19.99■□□□□ 0.79
PSMC3-213ENST00000619920 MYH16Q9H6N6 1097 aa19.99■□□□□ 0.79
PSMC3-213ENST00000619920 TMEM94Q12767 1356 aa19.98■□□□□ 0.79
PSMC3-213ENST00000619920 IL16Q14005 1332 aa19.98■□□□□ 0.79
PSMC3-213ENST00000619920 RIPK4P57078 832 aa19.98■□□□□ 0.79
PSMC3-213ENST00000619920 TRIM35Q9UPQ4 493 aa19.98■□□□□ 0.79
PSMC3-213ENST00000619920 FLT4P35916 1363 aa19.97■□□□□ 0.79
PSMC3-213ENST00000619920 PEAK1Q9H792 1746 aa19.97■□□□□ 0.79
PSMC3-213ENST00000619920 C1orf167Q5SNV9 1468 aa19.97■□□□□ 0.79
PSMC3-213ENST00000619920 PAK3O75914 559 aaPredicted RBP19.97■□□□□ 0.79
PSMC3-213ENST00000619920 HMOX1P09601 288 aa19.96■□□□□ 0.79
PSMC3-213ENST00000619920 STRCP1A6NGW2 1772 aa19.96■□□□□ 0.79
PSMC3-213ENST00000619920 NFE2L2Q16236 605 aa19.95■□□□□ 0.78
PSMC3-213ENST00000619920 HSP90AB2PQ58FF8 381 aa19.95■□□□□ 0.78
PSMC3-213ENST00000619920 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.95■□□□□ 0.78
PSMC3-213ENST00000619920 ORAI2Q96SN7 254 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms