RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 PLCH2O75038 1416 aa15.1■□□□□ 0.01
SPCS1-206ENST00000619898 RABEP1Q15276 862 aa15.1■□□□□ 0.01
SPCS1-206ENST00000619898 FCHSD2O94868 740 aa15.1■□□□□ 0.01
SPCS1-206ENST00000619898 C14orf93Q9H972 538 aaKnown RBP15.1■□□□□ 0.01
SPCS1-206ENST00000619898 MAGI2Q86UL8 1455 aa15.1■□□□□ 0.01
SPCS1-206ENST00000619898 ANO2Q9NQ90 1003 aa15.09■□□□□ 0.01
SPCS1-206ENST00000619898 AMPHP49418 695 aa15.09■□□□□ 0.01
SPCS1-206ENST00000619898 NGDNQ8NEJ9 315 aaKnown RBP15.09■□□□□ 0.01
SPCS1-206ENST00000619898 ABCC10Q5T3U5 1492 aa15.09■□□□□ 0.01
SPCS1-206ENST00000619898 NPC1L1Q9UHC9 1359 aa15.09■□□□□ 0.01
SPCS1-206ENST00000619898 NECTIN2Q92692 538 aa15.09■□□□□ 0.01
SPCS1-206ENST00000619898 XRCC6P12956 609 aaKnown RBP eCLIP15.08■□□□□ 0
SPCS1-206ENST00000619898 TNPO1Q92973 898 aaKnown RBP15.08■□□□□ 0
SPCS1-206ENST00000619898 PANK2Q9BZ23 570 aa15.08■□□□□ 0
SPCS1-206ENST00000619898 FGD1P98174 961 aa15.08■□□□□ 0
SPCS1-206ENST00000619898 CHAF1AQ13111 956 aaPredicted RBP15.08■□□□□ 0
SPCS1-206ENST00000619898 ZNF521Q96K83 1311 aa15.08■□□□□ 0
SPCS1-206ENST00000619898 PRPF40AO75400 957 aaKnown RBP15.07■□□□□ 0
SPCS1-206ENST00000619898 HDAC1Q13547 482 aaPredicted RBP15.07■□□□□ 0
SPCS1-206ENST00000619898 CCDC27Q2M243 656 aa15.07■□□□□ 0
SPCS1-206ENST00000619898 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.07■□□□□ 0
SPCS1-206ENST00000619898 ZNF428Q96B54 188 aa15.07■□□□□ 0
SPCS1-206ENST00000619898 ATAD2Q6PL18 1390 aa15.07■□□□□ 0
SPCS1-206ENST00000619898 ABCC11Q96J66 1382 aa15.07■□□□□ 0
SPCS1-206ENST00000619898 LTV1Q96GA3 475 aaPredicted RBP15.07■□□□□ 0
SPCS1-206ENST00000619898 ADGRL1O94910 1474 aa15.06■□□□□ 0
SPCS1-206ENST00000619898 PHF14O94880 888 aa15.06■□□□□ 0
SPCS1-206ENST00000619898 RAPGEF3O95398 923 aa15.06■□□□□ 0
SPCS1-206ENST00000619898 NFE2L2Q16236 605 aa15.06■□□□□ 0
SPCS1-206ENST00000619898 ALDH1L2Q3SY69 923 aa15.06■□□□□ 0
SPCS1-206ENST00000619898 RNF214Q8ND24 703 aa15.06■□□□□ 0
SPCS1-206ENST00000619898 NEK4P51957 841 aa15.05■□□□□ 0
SPCS1-206ENST00000619898 FKBP5Q13451 457 aaPredicted RBP15.05■□□□□ 0
SPCS1-206ENST00000619898 CCDC173Q0VFZ6 552 aa15.05■□□□□ -0
SPCS1-206ENST00000619898 DRC7Q8IY82 874 aa15.05■□□□□ -0
SPCS1-206ENST00000619898 CEP170Q5SW79 1584 aa15.05■□□□□ -0
SPCS1-206ENST00000619898 CSB-PGBD3P0DP91 1061 aa15.05■□□□□ -0
SPCS1-206ENST00000619898 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.05■□□□□ -0
SPCS1-206ENST00000619898 SLC52A1Q9NWF4 448 aa15.05■□□□□ -0
SPCS1-206ENST00000619898 FAM13BQ9NYF5 915 aa15.05■□□□□ -0
SPCS1-206ENST00000619898 TSPYL4Q9UJ04 414 aa15.04■□□□□ -0
SPCS1-206ENST00000619898 TRMT2AQ8IZ69 625 aaKnown RBP15.04■□□□□ -0
SPCS1-206ENST00000619898 SSFA2P28290 1259 aa15.03■□□□□ -0
SPCS1-206ENST00000619898 ZRSR1Q15695 479 aaKnown RBP15.03■□□□□ -0
SPCS1-206ENST00000619898 BMP2KLQ5H9B9 411 aa15.03■□□□□ -0
SPCS1-206ENST00000619898 FANCAO15360 1455 aa15.03■□□□□ -0
SPCS1-206ENST00000619898 R3HCC1Q9Y3T6 440 aaKnown RBP15.03■□□□□ -0
SPCS1-206ENST00000619898 NAP1L2Q9ULW6 460 aaPredicted RBP15.03■□□□□ -0
SPCS1-206ENST00000619898 TBC1D9Q6ZT07 1266 aa15.02■□□□□ -0
SPCS1-206ENST00000619898 NSD2O96028 1365 aa15.02■□□□□ -0
SPCS1-206ENST00000619898 ARHGEF5Q12774 1597 aa15.02□□□□□ -0.01
SPCS1-206ENST00000619898 RRS1Q15050 365 aaKnown RBP15.02□□□□□ -0.01
SPCS1-206ENST00000619898 SULT6B1Q6IMI4 303 aa15.02□□□□□ -0.01
SPCS1-206ENST00000619898 KDM5DQ9BY66 1539 aa15.02□□□□□ -0.01
SPCS1-206ENST00000619898 PLA2R1Q13018 1463 aa15.02□□□□□ -0.01
SPCS1-206ENST00000619898 NPHP1O15259 732 aa15.02□□□□□ -0.01
SPCS1-206ENST00000619898 FBLN1P23142 703 aa15.01□□□□□ -0.01
SPCS1-206ENST00000619898 NUCB1Q02818 461 aa15.01□□□□□ -0.01
SPCS1-206ENST00000619898 DCTN1Q14203 1278 aa15.01□□□□□ -0.01
SPCS1-206ENST00000619898 WDR7Q9Y4E6 1490 aa15.01□□□□□ -0.01
SPCS1-206ENST00000619898 IDI1Q13907 227 aa15.01□□□□□ -0.01
SPCS1-206ENST00000619898 MAST1Q9Y2H9 1570 aa15.01□□□□□ -0.01
SPCS1-206ENST00000619898 SLC4A2P04920 1241 aa15□□□□□ -0.01
SPCS1-206ENST00000619898 SMC5Q8IY18 1101 aa15□□□□□ -0.01
SPCS1-206ENST00000619898 IL16Q14005 1332 aa15□□□□□ -0.01
SPCS1-206ENST00000619898 ANKRD36BQ8N2N9 1353 aa14.99□□□□□ -0.01
SPCS1-206ENST00000619898 ERC2O15083 957 aa14.99□□□□□ -0.01
SPCS1-206ENST00000619898 FYB1O15117 783 aa14.99□□□□□ -0.01
SPCS1-206ENST00000619898 CWC22Q9HCG8 908 aaKnown RBP14.99□□□□□ -0.01
SPCS1-206ENST00000619898 TAOK2Q9UL54 1235 aa14.99□□□□□ -0.01
SPCS1-206ENST00000619898 EMILIN1Q9Y6C2 1016 aa14.99□□□□□ -0.01
SPCS1-206ENST00000619898 TXNDC2Q86VQ3 553 aa14.99□□□□□ -0.01
SPCS1-206ENST00000619898 WAPLQ7Z5K2 1190 aa14.98□□□□□ -0.01
SPCS1-206ENST00000619898 EIF2S2P20042 333 aaKnown RBP14.98□□□□□ -0.01
SPCS1-206ENST00000619898 RBM42Q9BTD8 480 aaKnown RBP14.98□□□□□ -0.01
SPCS1-206ENST00000619898 ZBTB40Q9NUA8 1239 aa14.98□□□□□ -0.01
SPCS1-206ENST00000619898 SMARCA5O60264 1052 aaPredicted RBP14.97□□□□□ -0.01
SPCS1-206ENST00000619898 CSPP1Q1MSJ5 1256 aa14.97□□□□□ -0.01
SPCS1-206ENST00000619898 IFT57Q9NWB7 429 aa14.97□□□□□ -0.01
SPCS1-206ENST00000619898 MBD3O95983 291 aa14.97□□□□□ -0.01
SPCS1-206ENST00000619898 TPM2P07951 284 aa14.97□□□□□ -0.01
SPCS1-206ENST00000619898 RRAGDQ9NQL2 400 aaPredicted RBP14.97□□□□□ -0.01
SPCS1-206ENST00000619898 RPAP2Q8IXW5 612 aaPredicted RBP14.97□□□□□ -0.01
SPCS1-206ENST00000619898 GPATCH3Q96I76 525 aa14.97□□□□□ -0.01
SPCS1-206ENST00000619898 PRDM15P57071 1507 aaPredicted RBP14.97□□□□□ -0.01
SPCS1-206ENST00000619898 ATP6V1DQ9Y5K8 247 aa14.97□□□□□ -0.01
SPCS1-206ENST00000619898 RTEL1-TNFRSF6BF6WH68 1400 aa14.97□□□□□ -0.01
SPCS1-206ENST00000619898 SAMD9LQ8IVG5 1584 aa14.96□□□□□ -0.01
SPCS1-206ENST00000619898 DIAPH3Q9NSV4 1193 aa14.96□□□□□ -0.01
SPCS1-206ENST00000619898 ZNF330Q9Y3S2 320 aaPredicted RBP14.96□□□□□ -0.01
SPCS1-206ENST00000619898 ABCA8O94911 1581 aa14.96□□□□□ -0.01
SPCS1-206ENST00000619898 CLCN1P35523 988 aa14.95□□□□□ -0.02
SPCS1-206ENST00000619898 ZSCAN30Q86W11 494 aa14.95□□□□□ -0.02
SPCS1-206ENST00000619898 NME9Q86XW9 330 aa14.95□□□□□ -0.02
SPCS1-206ENST00000619898 SNX21Q969T3 373 aa14.95□□□□□ -0.02
SPCS1-206ENST00000619898 BAG4O95429 457 aaKnown RBP14.95□□□□□ -0.02
SPCS1-206ENST00000619898 RBM10P98175 930 aaKnown RBP14.95□□□□□ -0.02
SPCS1-206ENST00000619898 CHMP4AQ9BY43 222 aa14.95□□□□□ -0.02
SPCS1-206ENST00000619898 GNAI2P04899 355 aa14.94□□□□□ -0.02
SPCS1-206ENST00000619898 MCM2P49736 904 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms