RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 HSCBQ8IWL3 235 aa12.49□□□□□ -0.41
CDH23-213ENST00000619887 HMOX1P09601 288 aa12.49□□□□□ -0.41
CDH23-213ENST00000619887 IL16Q14005 1332 aa12.49□□□□□ -0.41
CDH23-213ENST00000619887 TSR2Q969E8 191 aaKnown RBP12.49□□□□□ -0.41
CDH23-213ENST00000619887 RIMS2Q9UQ26 1411 aa12.49□□□□□ -0.41
CDH23-213ENST00000619887 PPRC1Q5VV67 1664 aaKnown RBP12.48□□□□□ -0.41
CDH23-213ENST00000619887 KIDINS220Q9ULH0 1771 aa12.48□□□□□ -0.41
CDH23-213ENST00000619887 AMPHP49418 695 aa12.48□□□□□ -0.41
CDH23-213ENST00000619887 WASLO00401 505 aaPredicted RBP12.48□□□□□ -0.41
CDH23-213ENST00000619887 WAPLQ7Z5K2 1190 aa12.48□□□□□ -0.41
CDH23-213ENST00000619887 A0A1W2PP64 1363 aa12.48□□□□□ -0.41
CDH23-213ENST00000619887 NUDT16Q96DE0 195 aaKnown RBP12.48□□□□□ -0.41
CDH23-213ENST00000619887 FYB1O15117 783 aa12.47□□□□□ -0.41
CDH23-213ENST00000619887 ATF7IPQ6VMQ6 1270 aa12.47□□□□□ -0.41
CDH23-213ENST00000619887 CHMP4AQ9BY43 222 aa12.47□□□□□ -0.41
CDH23-213ENST00000619887 ZNF521Q96K83 1311 aa12.47□□□□□ -0.41
CDH23-213ENST00000619887 ZFYVE9O95405 1425 aa12.47□□□□□ -0.41
CDH23-213ENST00000619887 YEATS2Q9ULM3 1422 aa12.47□□□□□ -0.41
CDH23-213ENST00000619887 NFE2L2Q16236 605 aa12.46□□□□□ -0.41
CDH23-213ENST00000619887 STK31Q9BXU1 1019 aa12.45□□□□□ -0.42
CDH23-213ENST00000619887 PDZRN3Q9UPQ7 1066 aa12.45□□□□□ -0.42
CDH23-213ENST00000619887 MFAP1P55081 439 aaKnown RBP12.45□□□□□ -0.42
CDH23-213ENST00000619887 ELL2O00472 640 aaPredicted RBP12.45□□□□□ -0.42
CDH23-213ENST00000619887 HMMRO75330 724 aa12.44□□□□□ -0.42
CDH23-213ENST00000619887 ALDH1L2Q3SY69 923 aa12.44□□□□□ -0.42
CDH23-213ENST00000619887 TNRQ92752 1358 aa12.44□□□□□ -0.42
CDH23-213ENST00000619887 TRMT2AQ8IZ69 625 aaKnown RBP12.44□□□□□ -0.42
CDH23-213ENST00000619887 NOB1Q9ULX3 412 aaKnown RBP12.44□□□□□ -0.42
CDH23-213ENST00000619887 HSP90AB1P08238 724 aaKnown RBP12.44□□□□□ -0.42
CDH23-213ENST00000619887 APBB1O00213 710 aa12.43□□□□□ -0.42
CDH23-213ENST00000619887 ANP32BQ92688 251 aaKnown RBP12.43□□□□□ -0.42
CDH23-213ENST00000619887 SPINK5Q9NQ38 1064 aaPredicted RBP12.43□□□□□ -0.42
CDH23-213ENST00000619887 NRXN1Q9ULB1 1477 aa12.42□□□□□ -0.42
CDH23-213ENST00000619887 GOLGA6L22H0YM25 854 aa12.42□□□□□ -0.42
CDH23-213ENST00000619887 THEMISQ8N1K5 641 aaPredicted RBP12.42□□□□□ -0.42
CDH23-213ENST00000619887 CAMSAP1Q5T5Y3 1602 aa12.42□□□□□ -0.42
CDH23-213ENST00000619887 TPRNQ4KMQ1 711 aa12.42□□□□□ -0.42
CDH23-213ENST00000619887 SSH1Q8WYL5 1049 aa12.42□□□□□ -0.42
CDH23-213ENST00000619887 KDM2BQ8NHM5 1336 aa12.41□□□□□ -0.42
CDH23-213ENST00000619887 SLC4A3P48751 1232 aa12.41□□□□□ -0.42
CDH23-213ENST00000619887 ANKRD45Q5TZF3 282 aa12.41□□□□□ -0.42
CDH23-213ENST00000619887 LTV1Q96GA3 475 aaPredicted RBP12.41□□□□□ -0.42
CDH23-213ENST00000619887 TWISTNBQ3B726 338 aaPredicted RBP12.41□□□□□ -0.42
CDH23-213ENST00000619887 SLKQ9H2G2 1235 aaPredicted RBP12.41□□□□□ -0.42
CDH23-213ENST00000619887 IFT57Q9NWB7 429 aa12.41□□□□□ -0.42
CDH23-213ENST00000619887 GLI2P10070 1586 aa12.41□□□□□ -0.42
CDH23-213ENST00000619887 NME9Q86XW9 330 aa12.4□□□□□ -0.42
CDH23-213ENST00000619887 QRICH2Q9H0J4 1663 aa12.4□□□□□ -0.42
CDH23-213ENST00000619887 OS9Q13438 667 aaPredicted RBP12.39□□□□□ -0.43
CDH23-213ENST00000619887 PPIP5K1Q6PFW1 1433 aa12.39□□□□□ -0.43
CDH23-213ENST00000619887 DIP2CQ9Y2E4 1556 aa12.39□□□□□ -0.43
CDH23-213ENST00000619887 GCC1Q96CN9 775 aa12.39□□□□□ -0.43
CDH23-213ENST00000619887 MROH1Q8NDA8 1641 aa12.38□□□□□ -0.43
CDH23-213ENST00000619887 CSB-PGBD3P0DP91 1061 aa12.38□□□□□ -0.43
CDH23-213ENST00000619887 SULT6B1Q6IMI4 303 aa12.38□□□□□ -0.43
CDH23-213ENST00000619887 SKAP1Q86WV1 359 aa12.38□□□□□ -0.43
CDH23-213ENST00000619887 EMILIN1Q9Y6C2 1016 aa12.38□□□□□ -0.43
CDH23-213ENST00000619887 ZC3H13Q5T200 1668 aaKnown RBP12.38□□□□□ -0.43
CDH23-213ENST00000619887 ZMYM3Q14202 1370 aa12.38□□□□□ -0.43
CDH23-213ENST00000619887 RRS1Q15050 365 aaKnown RBP12.38□□□□□ -0.43
CDH23-213ENST00000619887 GAS2L2Q8NHY3 880 aa12.38□□□□□ -0.43
CDH23-213ENST00000619887 IGHDP01880 384 aa12.37□□□□□ -0.43
CDH23-213ENST00000619887 TRIM27P14373 513 aa12.37□□□□□ -0.43
CDH23-213ENST00000619887 TAOK2Q9UL54 1235 aa12.37□□□□□ -0.43
CDH23-213ENST00000619887 TMEM57Q8N5G2 664 aa12.37□□□□□ -0.43
CDH23-213ENST00000619887 EDC4Q6P2E9 1401 aaKnown RBP12.37□□□□□ -0.43
CDH23-213ENST00000619887 LNPKQ9C0E8 428 aa12.37□□□□□ -0.43
CDH23-213ENST00000619887 POLKQ9UBT6 870 aa12.37□□□□□ -0.43
CDH23-213ENST00000619887 DMRT2Q9Y5R5 561 aa12.37□□□□□ -0.43
CDH23-213ENST00000619887 SLC26A8Q96RN1 970 aa12.36□□□□□ -0.43
CDH23-213ENST00000619887 C22orf23Q9BZE7 217 aa12.36□□□□□ -0.43
CDH23-213ENST00000619887 PTMSP20962 102 aa12.36□□□□□ -0.43
CDH23-213ENST00000619887 ZNF330Q9Y3S2 320 aaPredicted RBP12.36□□□□□ -0.43
CDH23-213ENST00000619887 SLC4A10Q6U841 1118 aa12.35□□□□□ -0.43
CDH23-213ENST00000619887 SIRT1Q96EB6 747 aa12.35□□□□□ -0.43
CDH23-213ENST00000619887 TSPYL4Q9UJ04 414 aa12.35□□□□□ -0.43
CDH23-213ENST00000619887 NLRP6P59044 892 aa12.35□□□□□ -0.43
CDH23-213ENST00000619887 L1TD1Q5T7N2 865 aaKnown RBP12.35□□□□□ -0.43
CDH23-213ENST00000619887 MCCP23508 829 aa12.35□□□□□ -0.43
CDH23-213ENST00000619887 NFKBIBQ15653 356 aa12.35□□□□□ -0.43
CDH23-213ENST00000619887 SPRYD3Q8NCJ5 442 aa12.34□□□□□ -0.43
CDH23-213ENST00000619887 TTC21BQ7Z4L5 1316 aa12.34□□□□□ -0.43
CDH23-213ENST00000619887 MROH2AA6NES4 1674 aa12.34□□□□□ -0.43
CDH23-213ENST00000619887 NEXMIFQ5QGS0 1516 aa12.34□□□□□ -0.43
CDH23-213ENST00000619887 HDAC1Q13547 482 aaPredicted RBP12.34□□□□□ -0.43
CDH23-213ENST00000619887 GBP4Q96PP9 640 aa12.34□□□□□ -0.43
CDH23-213ENST00000619887 HDAC5Q9UQL6 1122 aa12.34□□□□□ -0.43
CDH23-213ENST00000619887 ATP7BP35670 1465 aa12.34□□□□□ -0.43
CDH23-213ENST00000619887 NPHP1O15259 732 aa12.33□□□□□ -0.44
CDH23-213ENST00000619887 C8orf34Q49A92 452 aa12.33□□□□□ -0.44
CDH23-213ENST00000619887 ARHGAP45Q92619 1136 aa12.33□□□□□ -0.44
CDH23-213ENST00000619887 NCLP19338 710 aaKnown RBP12.33□□□□□ -0.44
CDH23-213ENST00000619887 GSE1Q14687 1217 aa12.33□□□□□ -0.44
CDH23-213ENST00000619887 PCDHB15Q9Y5E8 787 aa12.33□□□□□ -0.44
CDH23-213ENST00000619887 PPLO60437 1756 aa12.33□□□□□ -0.44
CDH23-213ENST00000619887 FRMPD1Q5SYB0 1578 aa12.33□□□□□ -0.44
CDH23-213ENST00000619887 ADGRB1O14514 1584 aa12.32□□□□□ -0.44
CDH23-213ENST00000619887 MYO3AQ8NEV4 1616 aa12.32□□□□□ -0.44
CDH23-213ENST00000619887 CHD1LQ86WJ1 897 aa12.32□□□□□ -0.44
CDH23-213ENST00000619887 THUMPD2Q9BTF0 503 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms