RNA–Protein interactions for RNA: ENST00000619750.1

PCDHGA3-203, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA3, Length 2,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-203ENST00000619750 GZF1Q9H116 711 aaPredicted RBP18.24■□□□□ 0.51
PCDHGA3-203ENST00000619750 NINLQ9Y2I6 1382 aa18.24■□□□□ 0.51
PCDHGA3-203ENST00000619750 TULP4Q9NRJ4 1543 aa18.24■□□□□ 0.51
PCDHGA3-203ENST00000619750 IDI1Q13907 227 aa18.24■□□□□ 0.51
PCDHGA3-203ENST00000619750 TMPOP42166 694 aaKnown RBP18.23■□□□□ 0.51
PCDHGA3-203ENST00000619750 TBC1D32Q96NH3 1257 aa18.23■□□□□ 0.51
PCDHGA3-203ENST00000619750 NOB1Q9ULX3 412 aaKnown RBP18.23■□□□□ 0.51
PCDHGA3-203ENST00000619750 PPLO60437 1756 aa18.23■□□□□ 0.51
PCDHGA3-203ENST00000619750 TRHP20396 242 aaPredicted RBP18.23■□□□□ 0.51
PCDHGA3-203ENST00000619750 TRIM35Q9UPQ4 493 aa18.23■□□□□ 0.51
PCDHGA3-203ENST00000619750 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.22■□□□□ 0.51
PCDHGA3-203ENST00000619750 ANKRD36BQ8N2N9 1353 aa18.22■□□□□ 0.51
PCDHGA3-203ENST00000619750 RIPK4P57078 832 aa18.22■□□□□ 0.51
PCDHGA3-203ENST00000619750 PRAM1Q96QH2 718 aa18.21■□□□□ 0.51
PCDHGA3-203ENST00000619750 THUMPD2Q9BTF0 503 aaKnown RBP18.21■□□□□ 0.51
PCDHGA3-203ENST00000619750 TMEM57Q8N5G2 664 aa18.21■□□□□ 0.51
PCDHGA3-203ENST00000619750 PIK3C2BO00750 1634 aa18.21■□□□□ 0.5
PCDHGA3-203ENST00000619750 PPP6R1Q9UPN7 881 aa18.2■□□□□ 0.5
PCDHGA3-203ENST00000619750 ELL2O00472 640 aaPredicted RBP18.2■□□□□ 0.5
PCDHGA3-203ENST00000619750 VGFO15240 615 aaPredicted RBP18.2■□□□□ 0.5
PCDHGA3-203ENST00000619750 SETBP1Q9Y6X0 1596 aa18.2■□□□□ 0.5
PCDHGA3-203ENST00000619750 PREX1Q8TCU6 1659 aa18.19■□□□□ 0.5
PCDHGA3-203ENST00000619750 CLTCQ00610 1675 aaKnown RBP18.19■□□□□ 0.5
PCDHGA3-203ENST00000619750 FYB1O15117 783 aa18.18■□□□□ 0.5
PCDHGA3-203ENST00000619750 CCDC27Q2M243 656 aa18.18■□□□□ 0.5
PCDHGA3-203ENST00000619750 PLEKHF1Q96S99 279 aa18.18■□□□□ 0.5
PCDHGA3-203ENST00000619750 ANTXR1Q9H6X2 564 aa18.18■□□□□ 0.5
PCDHGA3-203ENST00000619750 C1orf115Q9H7X2 142 aa18.18■□□□□ 0.5
PCDHGA3-203ENST00000619750 LNPKQ9C0E8 428 aa18.18■□□□□ 0.5
PCDHGA3-203ENST00000619750 HMOX1P09601 288 aa18.17■□□□□ 0.5
PCDHGA3-203ENST00000619750 ATF7IPQ6VMQ6 1270 aa18.16■□□□□ 0.5
PCDHGA3-203ENST00000619750 C22orf23Q9BZE7 217 aa18.16■□□□□ 0.5
PCDHGA3-203ENST00000619750 FBXO31Q5XUX0 539 aaPredicted RBP18.16■□□□□ 0.5
PCDHGA3-203ENST00000619750 CABP1Q9NZU7 370 aa18.15■□□□□ 0.5
PCDHGA3-203ENST00000619750 ARHGEF28Q8N1W1 1705 aaKnown RBP18.14■□□□□ 0.49
PCDHGA3-203ENST00000619750 EIF5BO60841 1220 aaKnown RBP18.14■□□□□ 0.49
PCDHGA3-203ENST00000619750 DIAPH1O60610 1272 aaKnown RBP18.13■□□□□ 0.49
PCDHGA3-203ENST00000619750 FOXD4L1Q9NU39 408 aa18.13■□□□□ 0.49
PCDHGA3-203ENST00000619750 RPGRIP1LQ68CZ1 1315 aa18.13■□□□□ 0.49
PCDHGA3-203ENST00000619750 PRKAR2BP31323 418 aa18.12■□□□□ 0.49
PCDHGA3-203ENST00000619750 DDX19BQ9UMR2 479 aa18.12■□□□□ 0.49
PCDHGA3-203ENST00000619750 MLECQ14165 292 aa18.12■□□□□ 0.49
PCDHGA3-203ENST00000619750 WAPLQ7Z5K2 1190 aa18.11■□□□□ 0.49
PCDHGA3-203ENST00000619750 ABCC11Q96J66 1382 aa18.11■□□□□ 0.49
PCDHGA3-203ENST00000619750 NEXMIFQ5QGS0 1516 aa18.1■□□□□ 0.49
PCDHGA3-203ENST00000619750 CDK19Q9BWU1 502 aa18.1■□□□□ 0.49
PCDHGA3-203ENST00000619750 PHACTR3Q96KR7 559 aa18.1■□□□□ 0.49
PCDHGA3-203ENST00000619750 TERF2IPQ9NYB0 399 aa18.1■□□□□ 0.49
PCDHGA3-203ENST00000619750 STAG3Q9UJ98 1225 aa18.1■□□□□ 0.49
PCDHGA3-203ENST00000619750 PRKCSHP14314 528 aaPredicted RBP18.09■□□□□ 0.49
PCDHGA3-203ENST00000619750 TSPYL6Q8N831 410 aa18.09■□□□□ 0.49
PCDHGA3-203ENST00000619750 SLC52A1Q9NWF4 448 aa18.09■□□□□ 0.49
PCDHGA3-203ENST00000619750 ZRANB1Q9UGI0 708 aa18.09■□□□□ 0.49
PCDHGA3-203ENST00000619750 SPATA31D1Q6ZQQ2 1576 aa18.09■□□□□ 0.49
PCDHGA3-203ENST00000619750 PANK2Q9BZ23 570 aa18.08■□□□□ 0.48
PCDHGA3-203ENST00000619750 ZBTB40Q9NUA8 1239 aa18.08■□□□□ 0.48
PCDHGA3-203ENST00000619750 ADGRB2O60241 1585 aa18.08■□□□□ 0.48
PCDHGA3-203ENST00000619750 MYO5BQ9ULV0 1848 aa18.07■□□□□ 0.48
PCDHGA3-203ENST00000619750 NSD2O96028 1365 aa18.07■□□□□ 0.48
PCDHGA3-203ENST00000619750 EMILIN1Q9Y6C2 1016 aa18.07■□□□□ 0.48
PCDHGA3-203ENST00000619750 USP32Q8NFA0 1604 aa18.07■□□□□ 0.48
PCDHGA3-203ENST00000619750 NCKAP5LQ9HCH0 1330 aa18.07■□□□□ 0.48
PCDHGA3-203ENST00000619750 AAMPQ13685 434 aa18.06■□□□□ 0.48
PCDHGA3-203ENST00000619750 TMEM131LA2VDJ0 1609 aa18.06■□□□□ 0.48
PCDHGA3-203ENST00000619750 HDAC1Q13547 482 aaPredicted RBP18.06■□□□□ 0.48
PCDHGA3-203ENST00000619750 ANKRD45Q5TZF3 282 aa18.06■□□□□ 0.48
PCDHGA3-203ENST00000619750 HDGFL2Q7Z4V5 671 aaPredicted RBP18.06■□□□□ 0.48
PCDHGA3-203ENST00000619750 COL3A1P02461 1466 aaPredicted RBP18.05■□□□□ 0.48
PCDHGA3-203ENST00000619750 MCM4P33991 863 aa18.05■□□□□ 0.48
PCDHGA3-203ENST00000619750 SMC5Q8IY18 1101 aa18.05■□□□□ 0.48
PCDHGA3-203ENST00000619750 ESF1Q9H501 851 aaKnown RBP18.05■□□□□ 0.48
PCDHGA3-203ENST00000619750 ATAD2Q6PL18 1390 aa18.04■□□□□ 0.48
PCDHGA3-203ENST00000619750 FAM83GA6ND36 823 aa18.04■□□□□ 0.48
PCDHGA3-203ENST00000619750 DCTN1Q14203 1278 aa18.04■□□□□ 0.48
PCDHGA3-203ENST00000619750 CD163L1Q9NR16 1453 aa18.04■□□□□ 0.48
PCDHGA3-203ENST00000619750 HSCBQ8IWL3 235 aa18.04■□□□□ 0.48
PCDHGA3-203ENST00000619750 POLKQ9UBT6 870 aa18.03■□□□□ 0.48
PCDHGA3-203ENST00000619750 ZMYM3Q14202 1370 aa18.02■□□□□ 0.48
PCDHGA3-203ENST00000619750 RBM42Q9BTD8 480 aaKnown RBP18.02■□□□□ 0.48
PCDHGA3-203ENST00000619750 PTPRMP28827 1452 aa18.02■□□□□ 0.47
PCDHGA3-203ENST00000619750 RRS1Q15050 365 aaKnown RBP18.02■□□□□ 0.47
PCDHGA3-203ENST00000619750 CHD1LQ86WJ1 897 aa18.02■□□□□ 0.47
PCDHGA3-203ENST00000619750 RRAGDQ9NQL2 400 aaPredicted RBP18.02■□□□□ 0.47
PCDHGA3-203ENST00000619750 KIF16BQ96L93 1317 aa18.02■□□□□ 0.47
PCDHGA3-203ENST00000619750 YTHDC2Q9H6S0 1430 aaKnown RBP18.01■□□□□ 0.47
PCDHGA3-203ENST00000619750 NME9Q86XW9 330 aa18.01■□□□□ 0.47
PCDHGA3-203ENST00000619750 RSPH6AQ9H0K4 717 aa18.01■□□□□ 0.47
PCDHGA3-203ENST00000619750 IPO8O15397 1037 aaKnown RBP18.01■□□□□ 0.47
PCDHGA3-203ENST00000619750 CD2BP2O95400 341 aaKnown RBP18.01■□□□□ 0.47
PCDHGA3-203ENST00000619750 CT47B1P0C2W7 299 aaPredicted RBP18.01■□□□□ 0.47
PCDHGA3-203ENST00000619750 NUCB1Q02818 461 aa18.01■□□□□ 0.47
PCDHGA3-203ENST00000619750 XRCC6P12956 609 aaKnown RBP eCLIP18■□□□□ 0.47
PCDHGA3-203ENST00000619750 LRRC7Q96NW7 1537 aa18■□□□□ 0.47
PCDHGA3-203ENST00000619750 CHMP5Q9NZZ3 219 aa18■□□□□ 0.47
PCDHGA3-203ENST00000619750 APBB1O00213 710 aa17.99■□□□□ 0.47
PCDHGA3-203ENST00000619750 TRAK2O60296 914 aa17.99■□□□□ 0.47
PCDHGA3-203ENST00000619750 NUTM2FA1L443 756 aa17.98■□□□□ 0.47
PCDHGA3-203ENST00000619750 GOLGA6L3A6NEY3 463 aa17.98■□□□□ 0.47
PCDHGA3-203ENST00000619750 SOX12O15370 315 aa17.98■□□□□ 0.47
PCDHGA3-203ENST00000619750 KRT24Q2M2I5 525 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms