RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 FTSJ3Q8IY81 847 aaKnown RBP14.36□□□□□ -0.11
TP53-223ENST00000618944 SMC4Q9NTJ3 1288 aa14.36□□□□□ -0.11
TP53-223ENST00000618944 CD163L1Q9NR16 1453 aa14.36□□□□□ -0.11
TP53-223ENST00000618944 ZKSCAN2Q63HK3 967 aa14.36□□□□□ -0.11
TP53-223ENST00000618944 PMFBP1Q8TBY8 1022 aa14.36□□□□□ -0.11
TP53-223ENST00000618944 PREX1Q8TCU6 1659 aa14.36□□□□□ -0.11
TP53-223ENST00000618944 ALKQ9UM73 1620 aa14.34□□□□□ -0.11
TP53-223ENST00000618944 MVPQ14764 893 aaKnown RBP14.34□□□□□ -0.11
TP53-223ENST00000618944 DZIP1LQ8IYY4 767 aaKnown RBP14.34□□□□□ -0.11
TP53-223ENST00000618944 SSH1Q8WYL5 1049 aa14.34□□□□□ -0.11
TP53-223ENST00000618944 NCBP3Q53F19 620 aaKnown RBP14.34□□□□□ -0.11
TP53-223ENST00000618944 PDZRN3Q9UPQ7 1066 aa14.34□□□□□ -0.11
TP53-223ENST00000618944 TXNDC2Q86VQ3 553 aa14.33□□□□□ -0.12
TP53-223ENST00000618944 RWDD1Q9H446 243 aaPredicted RBP14.33□□□□□ -0.12
TP53-223ENST00000618944 POLKQ9UBT6 870 aa14.33□□□□□ -0.12
TP53-223ENST00000618944 NOB1Q9ULX3 412 aaKnown RBP14.33□□□□□ -0.12
TP53-223ENST00000618944 NCKAP5LQ9HCH0 1330 aa14.32□□□□□ -0.12
TP53-223ENST00000618944 HMOX1P09601 288 aa14.32□□□□□ -0.12
TP53-223ENST00000618944 ZRANB1Q9UGI0 708 aa14.32□□□□□ -0.12
TP53-223ENST00000618944 ARHGEF40Q8TER5 1519 aa14.32□□□□□ -0.12
TP53-223ENST00000618944 TRIM27P14373 513 aa14.32□□□□□ -0.12
TP53-223ENST00000618944 NLRP1Q9C000 1473 aa14.31□□□□□ -0.12
TP53-223ENST00000618944 PRKAR2BP31323 418 aa14.31□□□□□ -0.12
TP53-223ENST00000618944 ITPRIPQ8IWB1 547 aa14.31□□□□□ -0.12
TP53-223ENST00000618944 COL3A1P02461 1466 aaPredicted RBP14.31□□□□□ -0.12
TP53-223ENST00000618944 RIMS2Q9UQ26 1411 aa14.31□□□□□ -0.12
TP53-223ENST00000618944 USP19O94966 1318 aa14.3□□□□□ -0.12
TP53-223ENST00000618944 AAMPQ13685 434 aa14.3□□□□□ -0.12
TP53-223ENST00000618944 PHACTR3Q96KR7 559 aa14.3□□□□□ -0.12
TP53-223ENST00000618944 FCHSD2O94868 740 aa14.3□□□□□ -0.12
TP53-223ENST00000618944 NME9Q86XW9 330 aa14.3□□□□□ -0.12
TP53-223ENST00000618944 THUMPD2Q9BTF0 503 aaKnown RBP14.3□□□□□ -0.12
TP53-223ENST00000618944 PNNQ9H307 717 aaKnown RBP14.3□□□□□ -0.12
TP53-223ENST00000618944 ESF1Q9H501 851 aaKnown RBP14.3□□□□□ -0.12
TP53-223ENST00000618944 EMILIN1Q9Y6C2 1016 aa14.3□□□□□ -0.12
TP53-223ENST00000618944 TSPOAP1O95153 1857 aa14.29□□□□□ -0.12
TP53-223ENST00000618944 A2ML1A8K2U0 1454 aa14.29□□□□□ -0.12
TP53-223ENST00000618944 USP35Q9P2H5 1018 aa14.29□□□□□ -0.12
TP53-223ENST00000618944 PPP6R1Q9UPN7 881 aa14.29□□□□□ -0.12
TP53-223ENST00000618944 PNPLA6Q8IY17 1366 aa14.29□□□□□ -0.12
TP53-223ENST00000618944 CT47B1P0C2W7 299 aaPredicted RBP14.29□□□□□ -0.12
TP53-223ENST00000618944 ATF7IPQ6VMQ6 1270 aa14.29□□□□□ -0.12
TP53-223ENST00000618944 WASLO00401 505 aaPredicted RBP14.28□□□□□ -0.12
TP53-223ENST00000618944 NFKBIBQ15653 356 aa14.28□□□□□ -0.12
TP53-223ENST00000618944 RSPH6AQ9H0K4 717 aa14.28□□□□□ -0.12
TP53-223ENST00000618944 METP08581 1390 aa14.28□□□□□ -0.12
TP53-223ENST00000618944 TMEM57Q8N5G2 664 aa14.27□□□□□ -0.12
TP53-223ENST00000618944 ADGRB2O60241 1585 aa14.27□□□□□ -0.12
TP53-223ENST00000618944 IL16Q14005 1332 aa14.27□□□□□ -0.13
TP53-223ENST00000618944 MED14O60244 1454 aa14.27□□□□□ -0.13
TP53-223ENST00000618944 NUDT16Q96DE0 195 aaKnown RBP14.26□□□□□ -0.13
TP53-223ENST00000618944 ELL2O00472 640 aaPredicted RBP14.26□□□□□ -0.13
TP53-223ENST00000618944 RRS1Q15050 365 aaKnown RBP14.26□□□□□ -0.13
TP53-223ENST00000618944 DDX19BQ9UMR2 479 aa14.25□□□□□ -0.13
TP53-223ENST00000618944 CLTCQ00610 1675 aaKnown RBP14.24□□□□□ -0.13
TP53-223ENST00000618944 NUTM2FA1L443 756 aa14.24□□□□□ -0.13
TP53-223ENST00000618944 PPIP5K1Q6PFW1 1433 aa14.24□□□□□ -0.13
TP53-223ENST00000618944 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.24□□□□□ -0.13
TP53-223ENST00000618944 DIP2BQ9P265 1576 aa14.24□□□□□ -0.13
TP53-223ENST00000618944 ZMYM3Q14202 1370 aa14.24□□□□□ -0.13
TP53-223ENST00000618944 IPO8O15397 1037 aaKnown RBP14.23□□□□□ -0.13
TP53-223ENST00000618944 IL13P35225 146 aa14.23□□□□□ -0.13
TP53-223ENST00000618944 NFE2L2Q16236 605 aa14.23□□□□□ -0.13
TP53-223ENST00000618944 TSPYL6Q8N831 410 aa14.22□□□□□ -0.13
TP53-223ENST00000618944 COG3Q96JB2 828 aa14.22□□□□□ -0.13
TP53-223ENST00000618944 CCDC61Q9Y6R9 512 aa14.22□□□□□ -0.13
TP53-223ENST00000618944 RIMBP3CA6NJZ7 1639 aa14.22□□□□□ -0.13
TP53-223ENST00000618944 RIMBP3BA6NNM3 1639 aa14.22□□□□□ -0.13
TP53-223ENST00000618944 RIMBP3Q9UFD9 1639 aa14.22□□□□□ -0.13
TP53-223ENST00000618944 FRAT2O75474 233 aaPredicted RBP14.21□□□□□ -0.13
TP53-223ENST00000618944 UPF2Q9HAU5 1272 aaKnown RBP14.21□□□□□ -0.13
TP53-223ENST00000618944 ZBTB40Q9NUA8 1239 aa14.21□□□□□ -0.13
TP53-223ENST00000618944 AGLP35573 1532 aa14.21□□□□□ -0.14
TP53-223ENST00000618944 HDAC1Q13547 482 aaPredicted RBP14.21□□□□□ -0.14
TP53-223ENST00000618944 KIF16BQ96L93 1317 aa14.2□□□□□ -0.14
TP53-223ENST00000618944 FAM83GA6ND36 823 aa14.2□□□□□ -0.14
TP53-223ENST00000618944 PLPPR3Q6T4P5 718 aa14.2□□□□□ -0.14
TP53-223ENST00000618944 RTN4Q9NQC3 1192 aaKnown RBP14.2□□□□□ -0.14
TP53-223ENST00000618944 VAMP4O75379 141 aa14.2□□□□□ -0.14
TP53-223ENST00000618944 HDGFP51858 240 aaKnown RBP14.2□□□□□ -0.14
TP53-223ENST00000618944 DCTN1Q14203 1278 aa14.2□□□□□ -0.14
TP53-223ENST00000618944 ALDH1L2Q3SY69 923 aa14.2□□□□□ -0.14
TP53-223ENST00000618944 ATP7BP35670 1465 aa14.19□□□□□ -0.14
TP53-223ENST00000618944 CPSF1Q10570 1443 aaKnown RBP14.19□□□□□ -0.14
TP53-223ENST00000618944 FAM135BQ49AJ0 1406 aa14.19□□□□□ -0.14
TP53-223ENST00000618944 SPATA31D1Q6ZQQ2 1576 aa14.19□□□□□ -0.14
TP53-223ENST00000618944 SLKQ9H2G2 1235 aaPredicted RBP14.19□□□□□ -0.14
TP53-223ENST00000618944 MBIPQ9NS73 344 aa14.19□□□□□ -0.14
TP53-223ENST00000618944 LRRC7Q96NW7 1537 aa14.19□□□□□ -0.14
TP53-223ENST00000618944 DLC1Q96QB1 1528 aa14.19□□□□□ -0.14
TP53-223ENST00000618944 EDC4Q6P2E9 1401 aaKnown RBP14.18□□□□□ -0.14
TP53-223ENST00000618944 BECN1Q14457 450 aa14.18□□□□□ -0.14
TP53-223ENST00000618944 TBC1D32Q96NH3 1257 aa14.18□□□□□ -0.14
TP53-223ENST00000618944 C1orf115Q9H7X2 142 aa14.18□□□□□ -0.14
TP53-223ENST00000618944 SOX12O15370 315 aa14.17□□□□□ -0.14
TP53-223ENST00000618944 IL27Q8NEV9 243 aa14.17□□□□□ -0.14
TP53-223ENST00000618944 ANO8Q9HCE9 1232 aaPredicted RBP14.17□□□□□ -0.14
TP53-223ENST00000618944 PRR36Q9H6K5 1346 aa14.17□□□□□ -0.14
TP53-223ENST00000618944 MFAP1P55081 439 aaKnown RBP14.17□□□□□ -0.14
TP53-223ENST00000618944 MRPL50Q8N5N7 158 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms