RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 BRD4O60885 1362 aaPredicted RBP31.34■■■□□ 2.61
CBWD3-213ENST00000618217 HSPA1LP34931 641 aa31.33■■■□□ 2.61
CBWD3-213ENST00000618217 SBNO1A3KN83 1393 aa31.33■■■□□ 2.61
CBWD3-213ENST00000618217 EDC4Q6P2E9 1401 aaKnown RBP31.3■■■□□ 2.6
CBWD3-213ENST00000618217 ALS2Q96Q42 1657 aa31.3■■■□□ 2.6
CBWD3-213ENST00000618217 SPATA31A3Q5VYP0 1347 aa31.29■■■□□ 2.6
CBWD3-213ENST00000618217 TTC21BQ7Z4L5 1316 aa31.29■■■□□ 2.6
CBWD3-213ENST00000618217 LRRC59Q96AG4 307 aaKnown RBP31.27■■■□□ 2.6
CBWD3-213ENST00000618217 TNS3Q68CZ2 1445 aa31.26■■■□□ 2.59
CBWD3-213ENST00000618217 PAK3O75914 559 aaPredicted RBP31.24■■■□□ 2.59
CBWD3-213ENST00000618217 TTC21AQ8NDW8 1320 aa31.24■■■□□ 2.59
CBWD3-213ENST00000618217 NSD3Q9BZ95 1437 aa31.24■■■□□ 2.59
CBWD3-213ENST00000618217 PER1O15534 1290 aaPredicted RBP31.24■■■□□ 2.59
CBWD3-213ENST00000618217 PIK3C2AO00443 1686 aa31.22■■■□□ 2.59
CBWD3-213ENST00000618217 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.22■■■□□ 2.59
CBWD3-213ENST00000618217 DDX10Q13206 875 aaKnown RBP31.2■■■□□ 2.59
CBWD3-213ENST00000618217 ARHGEF10O15013 1369 aa31.18■■■□□ 2.58
CBWD3-213ENST00000618217 PNPLA6Q8IY17 1366 aa31.18■■■□□ 2.58
CBWD3-213ENST00000618217 ABTB2Q8N961 1025 aa31.18■■■□□ 2.58
CBWD3-213ENST00000618217 SHPRHQ149N8 1683 aa31.18■■■□□ 2.58
CBWD3-213ENST00000618217 NME9Q86XW9 330 aa31.17■■■□□ 2.58
CBWD3-213ENST00000618217 COL22A1Q8NFW1 1626 aaPredicted RBP31.17■■■□□ 2.58
CBWD3-213ENST00000618217 MARF1Q9Y4F3 1742 aaKnown RBP31.17■■■□□ 2.58
CBWD3-213ENST00000618217 FYB1O15117 783 aa31.16■■■□□ 2.58
CBWD3-213ENST00000618217 JCADQ9P266 1359 aa31.15■■■□□ 2.58
CBWD3-213ENST00000618217 KIF20BQ96Q89 1820 aa31.15■■■□□ 2.58
CBWD3-213ENST00000618217 LMOD2Q6P5Q4 547 aa31.15■■■□□ 2.58
CBWD3-213ENST00000618217 USP31Q70CQ4 1352 aa31.15■■■□□ 2.58
CBWD3-213ENST00000618217 USP54Q70EL1 1684 aa31.15■■■□□ 2.58
CBWD3-213ENST00000618217 ZRANB1Q9UGI0 708 aa31.14■■■□□ 2.58
CBWD3-213ENST00000618217 KNSTRNQ9Y448 316 aa31.14■■■□□ 2.58
CBWD3-213ENST00000618217 CGNL1Q0VF96 1302 aa31.14■■■□□ 2.57
CBWD3-213ENST00000618217 NUTM2GQ5VZR2 741 aa31.13■■■□□ 2.57
CBWD3-213ENST00000618217 CRYBG1Q9Y4K1 1723 aa31.13■■■□□ 2.57
CBWD3-213ENST00000618217 MED1Q15648 1581 aaPredicted RBP31.12■■■□□ 2.57
CBWD3-213ENST00000618217 AMER1Q5JTC6 1135 aaPredicted RBP31.12■■■□□ 2.57
CBWD3-213ENST00000618217 NLRP6P59044 892 aa31.11■■■□□ 2.57
CBWD3-213ENST00000618217 ILDR1Q86SU0 546 aaPredicted RBP31.1■■■□□ 2.57
CBWD3-213ENST00000618217 NLRP13Q86W25 1043 aa31.09■■■□□ 2.57
CBWD3-213ENST00000618217 USP19O94966 1318 aa31.09■■■□□ 2.57
CBWD3-213ENST00000618217 OVOS2A0A0J9YW53 1432 aa31.09■■■□□ 2.57
CBWD3-213ENST00000618217 OVOS2Q6IE36 1432 aa31.09■■■□□ 2.57
CBWD3-213ENST00000618217 GGNBP2Q9H3C7 697 aa31.08■■■□□ 2.57
CBWD3-213ENST00000618217 ABCA3Q99758 1704 aa31.07■■■□□ 2.56
CBWD3-213ENST00000618217 CABLES1Q8TDN4 633 aa31.06■■■□□ 2.56
CBWD3-213ENST00000618217 ANKRD26Q9UPS8 1709 aa31.06■■■□□ 2.56
CBWD3-213ENST00000618217 NPC1L1Q9UHC9 1359 aa31.06■■■□□ 2.56
CBWD3-213ENST00000618217 SLIT3O75094 1523 aa31.05■■■□□ 2.56
CBWD3-213ENST00000618217 PHRF1Q9P1Y6 1649 aaKnown RBP31.05■■■□□ 2.56
CBWD3-213ENST00000618217 NSD2O96028 1365 aa31.04■■■□□ 2.56
CBWD3-213ENST00000618217 COG3Q96JB2 828 aa31.02■■■□□ 2.56
CBWD3-213ENST00000618217 SPATA31A6Q5VVP1 1343 aa31.02■■■□□ 2.56
CBWD3-213ENST00000618217 PLEKHG5O94827 1062 aa31■■■□□ 2.55
CBWD3-213ENST00000618217 GCP02774 474 aa30.99■■■□□ 2.55
CBWD3-213ENST00000618217 NFAT5O94916 1531 aa30.98■■■□□ 2.55
CBWD3-213ENST00000618217 CC2D1BQ5T0F9 858 aaKnown RBP30.97■■■□□ 2.55
CBWD3-213ENST00000618217 LRP6O75581 1613 aa30.95■■■□□ 2.55
CBWD3-213ENST00000618217 KCNH5Q8NCM2 988 aa30.95■■■□□ 2.54
CBWD3-213ENST00000618217 NUTM2BA6NNL0 878 aaPredicted RBP30.94■■■□□ 2.54
CBWD3-213ENST00000618217 NUTM2EB1AL46 878 aaPredicted RBP30.94■■■□□ 2.54
CBWD3-213ENST00000618217 NUTM2AQ8IVF1 878 aaPredicted RBP30.94■■■□□ 2.54
CBWD3-213ENST00000618217 MORC1Q86VD1 984 aa30.91■■■□□ 2.54
CBWD3-213ENST00000618217 FBLN1P23142 703 aa30.91■■■□□ 2.54
CBWD3-213ENST00000618217 CPDO75976 1380 aa30.9■■■□□ 2.54
CBWD3-213ENST00000618217 SOX12O15370 315 aa30.9■■■□□ 2.54
CBWD3-213ENST00000618217 HAP1P54257 671 aaPredicted RBP30.9■■■□□ 2.54
CBWD3-213ENST00000618217 AATKQ6ZMQ8 1374 aa30.88■■■□□ 2.53
CBWD3-213ENST00000618217 ZC3H6P61129 1189 aaKnown RBP30.87■■■□□ 2.53
CBWD3-213ENST00000618217 CNGB1Q14028 1251 aaPredicted RBP30.87■■■□□ 2.53
CBWD3-213ENST00000618217 ARHGEF25Q86VW2 580 aa30.87■■■□□ 2.53
CBWD3-213ENST00000618217 MAP2P11137 1827 aaKnown RBP30.87■■■□□ 2.53
CBWD3-213ENST00000618217 KIAA0232Q92628 1395 aa30.87■■■□□ 2.53
CBWD3-213ENST00000618217 LTN1O94822 1766 aa30.86■■■□□ 2.53
CBWD3-213ENST00000618217 ADAMTS2O95450 1211 aa30.86■■■□□ 2.53
CBWD3-213ENST00000618217 PARD3Q8TEW0 1356 aa30.86■■■□□ 2.53
CBWD3-213ENST00000618217 TNNT2P45379 298 aaPredicted RBP30.84■■■□□ 2.53
CBWD3-213ENST00000618217 FAM83GA6ND36 823 aa30.84■■■□□ 2.53
CBWD3-213ENST00000618217 COL18A1P39060 1754 aa30.83■■■□□ 2.53
CBWD3-213ENST00000618217 MAP3K19Q56UN5 1328 aa30.82■■■□□ 2.52
CBWD3-213ENST00000618217 RRS1Q15050 365 aaKnown RBP30.81■■■□□ 2.52
CBWD3-213ENST00000618217 PRDM11Q9NQV5 511 aa30.81■■■□□ 2.52
CBWD3-213ENST00000618217 POLKQ9UBT6 870 aa30.8■■■□□ 2.52
CBWD3-213ENST00000618217 COL14A1Q05707 1796 aaKnown RBP30.8■■■□□ 2.52
CBWD3-213ENST00000618217 LMO7Q8WWI1 1683 aa30.79■■■□□ 2.52
CBWD3-213ENST00000618217 CHRNA2Q15822 529 aa30.79■■■□□ 2.52
CBWD3-213ENST00000618217 PEAK1Q9H792 1746 aa30.78■■■□□ 2.52
CBWD3-213ENST00000618217 PRKRIP1Q9H875 184 aaPredicted RBP30.78■■■□□ 2.52
CBWD3-213ENST00000618217 RALBP1Q15311 655 aa30.77■■■□□ 2.52
CBWD3-213ENST00000618217 EMILIN1Q9Y6C2 1016 aa30.77■■■□□ 2.52
CBWD3-213ENST00000618217 ABCC6O95255 1503 aa30.77■■■□□ 2.52
CBWD3-213ENST00000618217 SMG6Q86US8 1419 aaKnown RBP30.76■■■□□ 2.52
CBWD3-213ENST00000618217 RGPD5Q99666 1765 aa30.76■■■□□ 2.51
CBWD3-213ENST00000618217 PLCH1Q4KWH8 1693 aa30.75■■■□□ 2.51
CBWD3-213ENST00000618217 AXIN2Q9Y2T1 843 aa30.75■■■□□ 2.51
CBWD3-213ENST00000618217 KIF24Q5T7B8 1368 aa30.75■■■□□ 2.51
CBWD3-213ENST00000618217 MEX3CQ5U5Q3 659 aaKnown RBP30.74■■■□□ 2.51
CBWD3-213ENST00000618217 C8orf37Q96NL8 207 aa30.74■■■□□ 2.51
CBWD3-213ENST00000618217 CAMTA1Q9Y6Y1 1673 aa30.74■■■□□ 2.51
CBWD3-213ENST00000618217 SLIT2O94813 1529 aa30.74■■■□□ 2.51
CBWD3-213ENST00000618217 ZBTB7CA1YPR0 619 aa30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms