RNA–Protein interactions for RNA: ENST00000617020.1

PCDH9-206, Transcript of protocadherin 9, humanhuman

TSL 5

Gene PCDH9, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-206ENST00000617020 IFFO2Q5TF58 517 aa10.15□□□□□ -0.78
PCDH9-206ENST00000617020 SLAIN2Q9P270 581 aa10.15□□□□□ -0.78
PCDH9-206ENST00000617020 ABCC3O15438 1527 aa10.15□□□□□ -0.78
PCDH9-206ENST00000617020 DHX29Q7Z478 1369 aaKnown RBP10.14□□□□□ -0.79
PCDH9-206ENST00000617020 RGS20O76081 388 aa10.14□□□□□ -0.79
PCDH9-206ENST00000617020 SLC4A5Q9BY07 1137 aa10.14□□□□□ -0.79
PCDH9-206ENST00000617020 ARHGAP35Q9NRY4 1499 aa10.14□□□□□ -0.79
PCDH9-206ENST00000617020 NHSL1Q5SYE7 1610 aa10.14□□□□□ -0.79
PCDH9-206ENST00000617020 CCDC18Q5T9S5 1454 aa10.13□□□□□ -0.79
PCDH9-206ENST00000617020 KIF3BO15066 747 aa10.13□□□□□ -0.79
PCDH9-206ENST00000617020 PTPN5P54829 565 aa10.13□□□□□ -0.79
PCDH9-206ENST00000617020 RBM6P78332 1123 aaKnown RBP10.13□□□□□ -0.79
PCDH9-206ENST00000617020 OXER1Q8TDS5 423 aa10.13□□□□□ -0.79
PCDH9-206ENST00000617020 PIK3C2BO00750 1634 aa10.12□□□□□ -0.79
PCDH9-206ENST00000617020 TXNDC2Q86VQ3 553 aa10.12□□□□□ -0.79
PCDH9-206ENST00000617020 PROSER2Q86WR7 435 aaPredicted RBP10.12□□□□□ -0.79
PCDH9-206ENST00000617020 BCL2L12Q9HB09 334 aa10.12□□□□□ -0.79
PCDH9-206ENST00000617020 CHD2O14647 1828 aaKnown RBP10.12□□□□□ -0.79
PCDH9-206ENST00000617020 MAST1Q9Y2H9 1570 aa10.11□□□□□ -0.79
PCDH9-206ENST00000617020 KCNA6P17658 529 aa10.11□□□□□ -0.79
PCDH9-206ENST00000617020 TET3O43151 1660 aa10.11□□□□□ -0.79
PCDH9-206ENST00000617020 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.1□□□□□ -0.79
PCDH9-206ENST00000617020 RTEL1-TNFRSF6BF6WH68 1400 aa10.1□□□□□ -0.79
PCDH9-206ENST00000617020 THSD4Q6ZMP0 1018 aa10.1□□□□□ -0.79
PCDH9-206ENST00000617020 HS6ST3Q8IZP7 471 aa10.1□□□□□ -0.79
PCDH9-206ENST00000617020 ZNF454Q8N9F8 522 aa10.1□□□□□ -0.79
PCDH9-206ENST00000617020 QTRT2Q9H974 415 aaKnown RBP10.1□□□□□ -0.79
PCDH9-206ENST00000617020 CAMSAP2Q08AD1 1489 aa10.1□□□□□ -0.79
PCDH9-206ENST00000617020 A0A0G2JS52 829 aa10.08□□□□□ -0.8
PCDH9-206ENST00000617020 BHMG1C9JSJ3 638 aaPredicted RBP10.08□□□□□ -0.8
PCDH9-206ENST00000617020 C8orf37Q96NL8 207 aa10.08□□□□□ -0.8
PCDH9-206ENST00000617020 MBD5Q9P267 1494 aa10.08□□□□□ -0.8
PCDH9-206ENST00000617020 MROH1Q8NDA8 1641 aa10.07□□□□□ -0.8
PCDH9-206ENST00000617020 FOSBP53539 338 aa10.07□□□□□ -0.8
PCDH9-206ENST00000617020 NGLY1Q96IV0 654 aa10.06□□□□□ -0.8
PCDH9-206ENST00000617020 CFDP1Q9UEE9 299 aaPredicted RBP10.06□□□□□ -0.8
PCDH9-206ENST00000617020 EID1Q9Y6B2 187 aa10.06□□□□□ -0.8
PCDH9-206ENST00000617020 TMEM2Q9UHN6 1383 aa10.05□□□□□ -0.8
PCDH9-206ENST00000617020 YY1P25490 414 aa10.05□□□□□ -0.8
PCDH9-206ENST00000617020 SLC26A8Q96RN1 970 aa10.05□□□□□ -0.8
PCDH9-206ENST00000617020 ZBED2Q9BTP6 218 aa10.05□□□□□ -0.8
PCDH9-206ENST00000617020 IRX2Q9BZI1 471 aaPredicted RBP10.05□□□□□ -0.8
PCDH9-206ENST00000617020 EFCAB6Q5THR3 1501 aa10.04□□□□□ -0.8
PCDH9-206ENST00000617020 PTPREP23469 700 aa10.04□□□□□ -0.8
PCDH9-206ENST00000617020 CCDC125Q86Z20 511 aa10.04□□□□□ -0.8
PCDH9-206ENST00000617020 CRISPLD2Q9H0B8 497 aa10.04□□□□□ -0.8
PCDH9-206ENST00000617020 BRWD3Q6RI45 1802 aa10.04□□□□□ -0.8
PCDH9-206ENST00000617020 CASKIN1Q8WXD9 1431 aa10.04□□□□□ -0.8
PCDH9-206ENST00000617020 ZNF644Q9H582 1327 aaPredicted RBP10.04□□□□□ -0.8
PCDH9-206ENST00000617020 EIF2AK4Q9P2K8 1649 aaKnown RBP10.04□□□□□ -0.8
PCDH9-206ENST00000617020 CCNB3Q8WWL7 1395 aa10.03□□□□□ -0.8
PCDH9-206ENST00000617020 ASXL1Q8IXJ9 1541 aa10.03□□□□□ -0.8
PCDH9-206ENST00000617020 EEA1Q15075 1411 aa10.03□□□□□ -0.8
PCDH9-206ENST00000617020 WNT2BQ93097 391 aa10.03□□□□□ -0.8
PCDH9-206ENST00000617020 BCL9LQ86UU0 1499 aa10.03□□□□□ -0.8
PCDH9-206ENST00000617020 MYO5BQ9ULV0 1848 aa10.03□□□□□ -0.8
PCDH9-206ENST00000617020 SETD5Q9C0A6 1442 aa10.02□□□□□ -0.81
PCDH9-206ENST00000617020 GOLGA8CPA6NN73 597 aa10.02□□□□□ -0.81
PCDH9-206ENST00000617020 CCDC141Q6ZP82 1450 aa10.02□□□□□ -0.81
PCDH9-206ENST00000617020 BLMP54132 1417 aaPredicted RBP10.01□□□□□ -0.81
PCDH9-206ENST00000617020 AMER1Q5JTC6 1135 aaPredicted RBP10.01□□□□□ -0.81
PCDH9-206ENST00000617020 MRPL50Q8N5N7 158 aaKnown RBP10.01□□□□□ -0.81
PCDH9-206ENST00000617020 PPP1R15BQ5SWA1 713 aa10□□□□□ -0.81
PCDH9-206ENST00000617020 PNPLA6Q8IY17 1366 aa10□□□□□ -0.81
PCDH9-206ENST00000617020 ATRNO75882 1429 aa9.99□□□□□ -0.81
PCDH9-206ENST00000617020 MARF1Q9Y4F3 1742 aaKnown RBP9.99□□□□□ -0.81
PCDH9-206ENST00000617020 FYCO1Q9BQS8 1478 aa9.99□□□□□ -0.81
PCDH9-206ENST00000617020 BRINP3Q76B58 766 aa9.99□□□□□ -0.81
PCDH9-206ENST00000617020 DEFB132Q7Z7B7 95 aa9.99□□□□□ -0.81
PCDH9-206ENST00000617020 ANO8Q9HCE9 1232 aaPredicted RBP9.99□□□□□ -0.81
PCDH9-206ENST00000617020 UNC13BO14795 1591 aa9.99□□□□□ -0.81
PCDH9-206ENST00000617020 SPHKAPQ2M3C7 1700 aa9.99□□□□□ -0.81
PCDH9-206ENST00000617020 HRCP23327 699 aa9.98□□□□□ -0.81
PCDH9-206ENST00000617020 NBPF3Q9H094 633 aa9.98□□□□□ -0.81
PCDH9-206ENST00000617020 NCOA3Q9Y6Q9 1424 aa9.98□□□□□ -0.81
PCDH9-206ENST00000617020 ADGRB3O60242 1522 aa9.97□□□□□ -0.81
PCDH9-206ENST00000617020 C14orf37Q86TY3 774 aa9.97□□□□□ -0.81
PCDH9-206ENST00000617020 CADPS2Q86UW7 1296 aa9.97□□□□□ -0.81
PCDH9-206ENST00000617020 ADAM33Q9BZ11 813 aa9.97□□□□□ -0.81
PCDH9-206ENST00000617020 USP21Q9UK80 565 aa9.97□□□□□ -0.81
PCDH9-206ENST00000617020 TRPC5Q9UL62 973 aaPredicted RBP9.97□□□□□ -0.81
PCDH9-206ENST00000617020 SENP3-EIF4A1A0A087X0R7 540 aa9.96□□□□□ -0.82
PCDH9-206ENST00000617020 ADAMTS2O95450 1211 aa9.96□□□□□ -0.82
PCDH9-206ENST00000617020 NKX1-1Q15270 411 aaPredicted RBP9.96□□□□□ -0.82
PCDH9-206ENST00000617020 ZDHHC16Q969W1 377 aa9.96□□□□□ -0.82
PCDH9-206ENST00000617020 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.96□□□□□ -0.82
PCDH9-206ENST00000617020 ATF3P18847 181 aa9.95□□□□□ -0.82
PCDH9-206ENST00000617020 ARHGAP31Q2M1Z3 1444 aa9.95□□□□□ -0.82
PCDH9-206ENST00000617020 ARHGEF5Q12774 1597 aa9.95□□□□□ -0.82
PCDH9-206ENST00000617020 EVI5O60447 810 aa9.94□□□□□ -0.82
PCDH9-206ENST00000617020 CHGAP10645 457 aaKnown RBP9.94□□□□□ -0.82
PCDH9-206ENST00000617020 CEP350Q5VT06 3117 aa9.93□□□□□ -0.82
PCDH9-206ENST00000617020 GCC2Q8IWJ2 1684 aa9.93□□□□□ -0.82
PCDH9-206ENST00000617020 GLI3P10071 1580 aa9.93□□□□□ -0.82
PCDH9-206ENST00000617020 LRRC59Q96AG4 307 aaKnown RBP9.93□□□□□ -0.82
PCDH9-206ENST00000617020 BCANQ96GW7 911 aa9.93□□□□□ -0.82
PCDH9-206ENST00000617020 CAMTA1Q9Y6Y1 1673 aa9.93□□□□□ -0.82
PCDH9-206ENST00000617020 COL22A1Q8NFW1 1626 aaPredicted RBP9.93□□□□□ -0.82
PCDH9-206ENST00000617020 MST1RQ04912 1400 aa9.92□□□□□ -0.82
PCDH9-206ENST00000617020 ITGBL1O95965 494 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms