RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 RGS22Q8NE09 1264 aa19.99■□□□□ 0.79
NOP56-220ENST00000616692 PTCH1Q13635 1447 aa19.99■□□□□ 0.79
NOP56-220ENST00000616692 WWC1Q8IX03 1113 aa19.98■□□□□ 0.79
NOP56-220ENST00000616692 RXRBP28702 533 aa19.98■□□□□ 0.79
NOP56-220ENST00000616692 RPGRIP1LQ68CZ1 1315 aa19.97■□□□□ 0.79
NOP56-220ENST00000616692 UPF1Q92900 1129 aaKnown RBP eCLIP19.96■□□□□ 0.798e-7■■□□□ 14.2
NOP56-220ENST00000616692 TRIM52Q96A61 297 aa19.96■□□□□ 0.79
NOP56-220ENST00000616692 CLTCL1P53675 1640 aa19.96■□□□□ 0.79
NOP56-220ENST00000616692 KIF1BO60333 1816 aa19.95■□□□□ 0.78
NOP56-220ENST00000616692 UTP14CQ5TAP6 766 aaKnown RBP19.95■□□□□ 0.78
NOP56-220ENST00000616692 METP08581 1390 aa19.95■□□□□ 0.78
NOP56-220ENST00000616692 NUTM2DQ5VT03 806 aaPredicted RBP19.94■□□□□ 0.78
NOP56-220ENST00000616692 PNPLA6Q8IY17 1366 aa19.93■□□□□ 0.78
NOP56-220ENST00000616692 RRBP1Q9P2E9 1410 aaKnown RBP19.93■□□□□ 0.78
NOP56-220ENST00000616692 NFKBIBQ15653 356 aa19.93■□□□□ 0.78
NOP56-220ENST00000616692 NALCNQ8IZF0 1738 aa19.93■□□□□ 0.78
NOP56-220ENST00000616692 PPP4R3BQ5MIZ7 849 aa19.91■□□□□ 0.78
NOP56-220ENST00000616692 C1orf167Q5SNV9 1468 aa19.9■□□□□ 0.78
NOP56-220ENST00000616692 AFF2P51816 1311 aa19.9■□□□□ 0.78
NOP56-220ENST00000616692 IRX3P78415 501 aaPredicted RBP19.9■□□□□ 0.78
NOP56-220ENST00000616692 B4GALNT3Q6L9W6 998 aa19.9■□□□□ 0.78
NOP56-220ENST00000616692 HFM1A2PYH4 1435 aa19.9■□□□□ 0.78
NOP56-220ENST00000616692 RBM6P78332 1123 aaKnown RBP19.89■□□□□ 0.77
NOP56-220ENST00000616692 COL22A1Q8NFW1 1626 aaPredicted RBP19.88■□□□□ 0.77
NOP56-220ENST00000616692 PRDM10Q9NQV6 1147 aa19.88■□□□□ 0.77
NOP56-220ENST00000616692 NAIPQ13075 1403 aa19.88■□□□□ 0.77
NOP56-220ENST00000616692 SOS2Q07890 1332 aaPredicted RBP19.87■□□□□ 0.77
NOP56-220ENST00000616692 POLR3GLQ9BT43 218 aa19.87■□□□□ 0.77
NOP56-220ENST00000616692 MAP7D2Q96T17 732 aa19.86■□□□□ 0.77
NOP56-220ENST00000616692 DMTNQ08495 405 aa19.85■□□□□ 0.77
NOP56-220ENST00000616692 TPRNQ4KMQ1 711 aa19.85■□□□□ 0.77
NOP56-220ENST00000616692 NUTM2BA6NNL0 878 aaPredicted RBP19.83■□□□□ 0.77
NOP56-220ENST00000616692 NUTM2EB1AL46 878 aaPredicted RBP19.83■□□□□ 0.77
NOP56-220ENST00000616692 NUTM2AQ8IVF1 878 aaPredicted RBP19.83■□□□□ 0.77
NOP56-220ENST00000616692 ANP32BQ92688 251 aaKnown RBP19.83■□□□□ 0.77
NOP56-220ENST00000616692 NGLY1Q96IV0 654 aa19.83■□□□□ 0.77
NOP56-220ENST00000616692 CDC42BPGQ6DT37 1551 aa19.83■□□□□ 0.77
NOP56-220ENST00000616692 PPLO60437 1756 aa19.82■□□□□ 0.76
NOP56-220ENST00000616692 RGS12O14924 1447 aa19.82■□□□□ 0.76
NOP56-220ENST00000616692 QTRT2Q9H974 415 aaKnown RBP19.81■□□□□ 0.76
NOP56-220ENST00000616692 ROBO2Q9HCK4 1378 aa19.8■□□□□ 0.76
NOP56-220ENST00000616692 TECPR2O15040 1411 aa19.79■□□□□ 0.76
NOP56-220ENST00000616692 CCER2I3L3R5 266 aa19.79■□□□□ 0.76
NOP56-220ENST00000616692 FNBP4Q8N3X1 1017 aaPredicted RBP19.79■□□□□ 0.76
NOP56-220ENST00000616692 ATAD2Q6PL18 1390 aa19.78■□□□□ 0.76
NOP56-220ENST00000616692 MMP14P50281 582 aa19.78■□□□□ 0.76
NOP56-220ENST00000616692 CLGNO14967 610 aa19.78■□□□□ 0.76
NOP56-220ENST00000616692 L1TD1Q5T7N2 865 aaKnown RBP19.78■□□□□ 0.76
NOP56-220ENST00000616692 CCDC9Q9Y3X0 531 aaKnown RBP19.77■□□□□ 0.76
NOP56-220ENST00000616692 LRPPRCP42704 1394 aaKnown RBP19.77■□□□□ 0.76
NOP56-220ENST00000616692 ATRNO75882 1429 aa19.77■□□□□ 0.75
NOP56-220ENST00000616692 C8orf37Q96NL8 207 aa19.77■□□□□ 0.75
NOP56-220ENST00000616692 TRPC5Q9UL62 973 aaPredicted RBP19.77■□□□□ 0.75
NOP56-220ENST00000616692 MYOM2P54296 1465 aa19.76■□□□□ 0.75
NOP56-220ENST00000616692 TICAM2Q86XR7 235 aa19.76■□□□□ 0.75
NOP56-220ENST00000616692 NPHP3Q7Z494 1330 aa19.75■□□□□ 0.75
NOP56-220ENST00000616692 TNNT2P45379 298 aaPredicted RBP19.75■□□□□ 0.75
NOP56-220ENST00000616692 FAM193AP78312 1265 aa19.75■□□□□ 0.75
NOP56-220ENST00000616692 KNDC1Q76NI1 1749 aa19.75■□□□□ 0.75
NOP56-220ENST00000616692 ANKRD30BQ9BXX2 1392 aa19.74■□□□□ 0.75
NOP56-220ENST00000616692 GRIPAP1Q4V328 841 aa19.74■□□□□ 0.75
NOP56-220ENST00000616692 CCDC125Q86Z20 511 aa19.74■□□□□ 0.75
NOP56-220ENST00000616692 SIRT1Q96EB6 747 aa19.73■□□□□ 0.75
NOP56-220ENST00000616692 PXDNQ92626 1479 aa19.73■□□□□ 0.75
NOP56-220ENST00000616692 TMED8Q6PL24 325 aaPredicted RBP19.73■□□□□ 0.75
NOP56-220ENST00000616692 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.73■□□□□ 0.75
NOP56-220ENST00000616692 HDAC5Q9UQL6 1122 aa19.72■□□□□ 0.75
NOP56-220ENST00000616692 MARF1Q9Y4F3 1742 aaKnown RBP19.72■□□□□ 0.75
NOP56-220ENST00000616692 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.71■□□□□ 0.75
NOP56-220ENST00000616692 KIF20AO95235 890 aa19.71■□□□□ 0.75
NOP56-220ENST00000616692 ABCC11Q96J66 1382 aa19.71■□□□□ 0.75
NOP56-220ENST00000616692 USP21Q9UK80 565 aa19.71■□□□□ 0.75
NOP56-220ENST00000616692 KIF1AQ12756 1690 aa19.71■□□□□ 0.75
NOP56-220ENST00000616692 PTMAP06454 111 aaKnown RBP19.7■□□□□ 0.74
NOP56-220ENST00000616692 MAPK8IP2Q13387 824 aaPredicted RBP19.7■□□□□ 0.74
NOP56-220ENST00000616692 IFT172Q9UG01 1749 aa19.7■□□□□ 0.74
NOP56-220ENST00000616692 ORAI2Q96SN7 254 aa19.69■□□□□ 0.74
NOP56-220ENST00000616692 SLC4A1APQ9BWU0 796 aaKnown RBP19.69■□□□□ 0.74
NOP56-220ENST00000616692 SPATA31E1Q6ZUB1 1445 aa19.69■□□□□ 0.74
NOP56-220ENST00000616692 DDX17Q92841 729 aaKnown RBP19.69■□□□□ 0.74
NOP56-220ENST00000616692 DNTTIP2Q5QJE6 756 aaKnown RBP19.68■□□□□ 0.74
NOP56-220ENST00000616692 PATL2C9JE40 543 aaKnown RBP19.67■□□□□ 0.74
NOP56-220ENST00000616692 TAF3Q5VWG9 929 aa19.66■□□□□ 0.74
NOP56-220ENST00000616692 CCDC144AA2RUR9 1427 aa19.66■□□□□ 0.74
NOP56-220ENST00000616692 ADAMTS2O95450 1211 aa19.66■□□□□ 0.74
NOP56-220ENST00000616692 FMN2Q9NZ56 1722 aa19.65■□□□□ 0.74
NOP56-220ENST00000616692 ZNF622Q969S3 477 aaKnown RBP eCLIP19.64■□□□□ 0.734e-9■■■□□ 15.1
NOP56-220ENST00000616692 BCL9LQ86UU0 1499 aa19.64■□□□□ 0.73
NOP56-220ENST00000616692 MYCNP04198 464 aaPredicted RBP19.64■□□□□ 0.73
NOP56-220ENST00000616692 PIK3C2GO75747 1445 aa19.63■□□□□ 0.73
NOP56-220ENST00000616692 PSEN1P49768 467 aa19.63■□□□□ 0.73
NOP56-220ENST00000616692 ZSCAN20P17040 1043 aaPredicted RBP19.62■□□□□ 0.73
NOP56-220ENST00000616692 ESCO1Q5FWF5 840 aa19.62■□□□□ 0.73
NOP56-220ENST00000616692 E9PSI1 815 aa19.61■□□□□ 0.73
NOP56-220ENST00000616692 AXDND1Q5T1B0 1012 aaPredicted RBP19.61■□□□□ 0.73
NOP56-220ENST00000616692 NRXN1Q9ULB1 1477 aa19.61■□□□□ 0.73
NOP56-220ENST00000616692 SLIT2O94813 1529 aa19.61■□□□□ 0.73
NOP56-220ENST00000616692 APPP05067 770 aa19.6■□□□□ 0.73
NOP56-220ENST00000616692 MTERF4Q7Z6M4 381 aaKnown RBP19.6■□□□□ 0.73
NOP56-220ENST00000616692 LETM1O95202 739 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms