RNA–Protein interactions for RNA: ENST00000615505.4

SURF1-205, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 1 (best) BASIC

Gene SURF1, Length 991 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-205ENST00000615505 TESK2Q96S53 571 aa35.65■■■■□ 3.3
SURF1-205ENST00000615505 ALS2Q96Q42 1657 aa35.64■■■■□ 3.3
SURF1-205ENST00000615505 PUS7Q96PZ0 661 aaKnown RBP35.62■■■■□ 3.29
SURF1-205ENST00000615505 BRD4O60885 1362 aaPredicted RBP35.61■■■■□ 3.29
SURF1-205ENST00000615505 ZNF692Q9BU19 519 aaPredicted RBP35.6■■■■□ 3.29
SURF1-205ENST00000615505 FNBP4Q8N3X1 1017 aaPredicted RBP35.58■■■■□ 3.29
SURF1-205ENST00000615505 ABTB2Q8N961 1025 aa35.57■■■■□ 3.28
SURF1-205ENST00000615505 USP21Q9UK80 565 aa35.56■■■■□ 3.28
SURF1-205ENST00000615505 MARF1Q9Y4F3 1742 aaKnown RBP35.56■■■■□ 3.28
SURF1-205ENST00000615505 USP6P35125 1406 aa35.56■■■■□ 3.28
SURF1-205ENST00000615505 TMF1P82094 1093 aa35.55■■■■□ 3.28
SURF1-205ENST00000615505 TMC1Q8TDI8 760 aa35.55■■■■□ 3.28
SURF1-205ENST00000615505 NUTM2GQ5VZR2 741 aa35.53■■■■□ 3.28
SURF1-205ENST00000615505 QTRT2Q9H974 415 aaKnown RBP35.53■■■■□ 3.28
SURF1-205ENST00000615505 ABCA3Q99758 1704 aa35.51■■■■□ 3.27
SURF1-205ENST00000615505 RXRBP28702 533 aa35.5■■■■□ 3.27
SURF1-205ENST00000615505 CPSF1Q10570 1443 aaKnown RBP35.49■■■■□ 3.27
SURF1-205ENST00000615505 NLRP13Q86W25 1043 aa35.49■■■■□ 3.27
SURF1-205ENST00000615505 SLC12A5Q9H2X9 1139 aa35.48■■■■□ 3.27
SURF1-205ENST00000615505 KTN1Q86UP2 1357 aaKnown RBP35.48■■■■□ 3.27
SURF1-205ENST00000615505 CDCA8Q53HL2 280 aa35.47■■■■□ 3.27
SURF1-205ENST00000615505 HDGFL2Q7Z4V5 671 aaPredicted RBP35.47■■■■□ 3.27
SURF1-205ENST00000615505 TRPC5Q9UL62 973 aaPredicted RBP35.47■■■■□ 3.27
SURF1-205ENST00000615505 SSH2Q76I76 1423 aa35.47■■■■□ 3.27
SURF1-205ENST00000615505 SOCS7O14512 581 aa35.46■■■■□ 3.27
SURF1-205ENST00000615505 EIF4G2P78344 907 aaKnown RBP eCLIP35.45■■■■□ 3.27
SURF1-205ENST00000615505 TERF2IPQ9NYB0 399 aa35.45■■■■□ 3.27
SURF1-205ENST00000615505 AKAP12Q02952 1782 aa35.45■■■■□ 3.27
SURF1-205ENST00000615505 NINLQ9Y2I6 1382 aa35.44■■■■□ 3.26
SURF1-205ENST00000615505 TTC21BQ7Z4L5 1316 aa35.44■■■■□ 3.26
SURF1-205ENST00000615505 BCL9LQ86UU0 1499 aa35.43■■■■□ 3.26
SURF1-205ENST00000615505 FAM83GA6ND36 823 aa35.43■■■■□ 3.26
SURF1-205ENST00000615505 RBM6P78332 1123 aaKnown RBP35.43■■■■□ 3.26
SURF1-205ENST00000615505 SLIT2O94813 1529 aa35.42■■■■□ 3.26
SURF1-205ENST00000615505 TTC21AQ8NDW8 1320 aa35.42■■■■□ 3.26
SURF1-205ENST00000615505 NLRP6P59044 892 aa35.42■■■■□ 3.26
SURF1-205ENST00000615505 UNC5CLQ8IV45 518 aa35.42■■■■□ 3.26
SURF1-205ENST00000615505 CRYBG1Q9Y4K1 1723 aa35.42■■■■□ 3.26
SURF1-205ENST00000615505 USP19O94966 1318 aa35.4■■■■□ 3.26
SURF1-205ENST00000615505 PRDM11Q9NQV5 511 aa35.39■■■■□ 3.26
SURF1-205ENST00000615505 CD163L1Q9NR16 1453 aa35.39■■■■□ 3.26
SURF1-205ENST00000615505 ATRNO75882 1429 aa35.38■■■■□ 3.25
SURF1-205ENST00000615505 PHRF1Q9P1Y6 1649 aaKnown RBP35.36■■■■□ 3.25
SURF1-205ENST00000615505 HSPA5P11021 654 aaKnown RBP35.36■■■■□ 3.25
SURF1-205ENST00000615505 ZC3H6P61129 1189 aaKnown RBP35.36■■■■□ 3.25
SURF1-205ENST00000615505 GCP02774 474 aa35.35■■■■□ 3.25
SURF1-205ENST00000615505 KIAA0232Q92628 1395 aa35.35■■■■□ 3.25
SURF1-205ENST00000615505 MON2Q7Z3U7 1717 aa35.35■■■■□ 3.25
SURF1-205ENST00000615505 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.34■■■■□ 3.25
SURF1-205ENST00000615505 A0A1W2PP64 1363 aa35.34■■■■□ 3.25
SURF1-205ENST00000615505 BTG4Q9NY30 223 aa35.33■■■■□ 3.25
SURF1-205ENST00000615505 CDK12Q9NYV4 1490 aaPredicted RBP35.33■■■■□ 3.25
SURF1-205ENST00000615505 COL14A1Q05707 1796 aaKnown RBP35.33■■■■□ 3.25
SURF1-205ENST00000615505 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.32■■■■□ 3.25
SURF1-205ENST00000615505 NRKQ7Z2Y5 1582 aa35.32■■■■□ 3.24
SURF1-205ENST00000615505 PLCH1Q4KWH8 1693 aa35.32■■■■□ 3.24
SURF1-205ENST00000615505 NWD2Q9ULI1 1742 aa35.32■■■■□ 3.24
SURF1-205ENST00000615505 EDC4Q6P2E9 1401 aaKnown RBP35.32■■■■□ 3.24
SURF1-205ENST00000615505 PIK3C2AO00443 1686 aa35.31■■■■□ 3.24
SURF1-205ENST00000615505 GJD4Q96KN9 370 aaPredicted RBP35.31■■■■□ 3.24
SURF1-205ENST00000615505 CHRNA2Q15822 529 aa35.28■■■■□ 3.24
SURF1-205ENST00000615505 VPS72Q15906 364 aa35.28■■■■□ 3.24
SURF1-205ENST00000615505 CPDO75976 1380 aa35.27■■■■□ 3.24
SURF1-205ENST00000615505 ANKRD36BQ8N2N9 1353 aa35.27■■■■□ 3.24
SURF1-205ENST00000615505 KCNH5Q8NCM2 988 aa35.26■■■■□ 3.24
SURF1-205ENST00000615505 CCDC9Q9Y3X0 531 aaKnown RBP35.26■■■■□ 3.24
SURF1-205ENST00000615505 SLIT3O75094 1523 aa35.25■■■■□ 3.23
SURF1-205ENST00000615505 NME9Q86XW9 330 aa35.24■■■■□ 3.23
SURF1-205ENST00000615505 USP31Q70CQ4 1352 aa35.23■■■■□ 3.23
SURF1-205ENST00000615505 RGS12O14924 1447 aa35.21■■■■□ 3.23
SURF1-205ENST00000615505 ZBTB7CA1YPR0 619 aa35.19■■■■□ 3.22
SURF1-205ENST00000615505 POLR3GLQ9BT43 218 aa35.19■■■■□ 3.22
SURF1-205ENST00000615505 ZRANB1Q9UGI0 708 aa35.19■■■■□ 3.22
SURF1-205ENST00000615505 NRAPQ86VF7 1730 aa35.18■■■■□ 3.22
SURF1-205ENST00000615505 SOX12O15370 315 aa35.17■■■■□ 3.22
SURF1-205ENST00000615505 EVA1CP58658 441 aa35.16■■■■□ 3.22
SURF1-205ENST00000615505 STRN4Q9NRL3 753 aa35.15■■■■□ 3.22
SURF1-205ENST00000615505 GLI3P10071 1580 aa35.14■■■■□ 3.22
SURF1-205ENST00000615505 AATKQ6ZMQ8 1374 aa35.13■■■■□ 3.21
SURF1-205ENST00000615505 ARHGEF25Q86VW2 580 aa35.12■■■■□ 3.21
SURF1-205ENST00000615505 USP54Q70EL1 1684 aa35.11■■■■□ 3.21
SURF1-205ENST00000615505 CAMTA1Q9Y6Y1 1673 aa35.11■■■■□ 3.21
SURF1-205ENST00000615505 SPATA31A5Q5VU36 1347 aa35.1■■■■□ 3.21
SURF1-205ENST00000615505 SPATA31A7Q8IWB4 1347 aa35.1■■■■□ 3.21
SURF1-205ENST00000615505 COG3Q96JB2 828 aa35.1■■■■□ 3.21
SURF1-205ENST00000615505 MYOM1P52179 1685 aa35.1■■■■□ 3.21
SURF1-205ENST00000615505 LMO7Q8WWI1 1683 aa35.09■■■■□ 3.21
SURF1-205ENST00000615505 OVOS2A0A0J9YW53 1432 aa35.07■■■■□ 3.21
SURF1-205ENST00000615505 OVOS2Q6IE36 1432 aa35.07■■■■□ 3.21
SURF1-205ENST00000615505 NFAT5O94916 1531 aa35.07■■■■□ 3.21
SURF1-205ENST00000615505 ONECUT3O60422 494 aaPredicted RBP35.07■■■■□ 3.2
SURF1-205ENST00000615505 CARD14Q9BXL6 1004 aa35.05■■■■□ 3.2
SURF1-205ENST00000615505 FYB1O15117 783 aa35.04■■■■□ 3.2
SURF1-205ENST00000615505 FAM98CQ17RN3 349 aaKnown RBP35.04■■■■□ 3.2
SURF1-205ENST00000615505 SEPT12Q8IYM1 358 aa35.04■■■■□ 3.2
SURF1-205ENST00000615505 SPATA31A1Q5TZJ5 1347 aa35.04■■■■□ 3.2
SURF1-205ENST00000615505 C11orf95C9JLR9 678 aaPredicted RBP35.03■■■■□ 3.2
SURF1-205ENST00000615505 LARP1Q6PKG0 1096 aaKnown RBP35.03■■■■□ 3.2
SURF1-205ENST00000615505 A0A0G2JS52 829 aa35.02■■■■□ 3.2
SURF1-205ENST00000615505 MYT1Q01538 1121 aa35.02■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms