RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 KIF13AQ9H1H9 1805 aa25.58■■□□□ 1.69
SMARCD2-212ENST00000613943 ZBTB47Q9UFB7 747 aaPredicted RBP25.58■■□□□ 1.68
SMARCD2-212ENST00000613943 TMPOP42166 694 aaKnown RBP25.57■■□□□ 1.68
SMARCD2-212ENST00000613943 PDE3AQ14432 1141 aa25.57■■□□□ 1.68
SMARCD2-212ENST00000613943 ZRANB1Q9UGI0 708 aa25.57■■□□□ 1.68
SMARCD2-212ENST00000613943 NBR1Q14596 966 aa25.56■■□□□ 1.68
SMARCD2-212ENST00000613943 SETD1AO15047 1707 aaKnown RBP25.56■■□□□ 1.68
SMARCD2-212ENST00000613943 DIAPH1O60610 1272 aaKnown RBP25.55■■□□□ 1.68
SMARCD2-212ENST00000613943 TRIM35Q9UPQ4 493 aa25.55■■□□□ 1.68
SMARCD2-212ENST00000613943 MAPK8IP3Q9UPT6 1336 aa25.55■■□□□ 1.68
SMARCD2-212ENST00000613943 NRXN3Q9Y4C0 1643 aa25.55■■□□□ 1.68
SMARCD2-212ENST00000613943 PLPPR3Q6T4P5 718 aa25.54■■□□□ 1.68
SMARCD2-212ENST00000613943 MYH16Q9H6N6 1097 aa25.54■■□□□ 1.68
SMARCD2-212ENST00000613943 ADGRB2O60241 1585 aa25.54■■□□□ 1.68
SMARCD2-212ENST00000613943 WASLO00401 505 aaPredicted RBP25.53■■□□□ 1.68
SMARCD2-212ENST00000613943 NME9Q86XW9 330 aa25.53■■□□□ 1.68
SMARCD2-212ENST00000613943 POLKQ9UBT6 870 aa25.52■■□□□ 1.68
SMARCD2-212ENST00000613943 MED14O60244 1454 aa25.52■■□□□ 1.68
SMARCD2-212ENST00000613943 DLC1Q96QB1 1528 aa25.51■■□□□ 1.68
SMARCD2-212ENST00000613943 RIPK4P57078 832 aa25.51■■□□□ 1.67
SMARCD2-212ENST00000613943 EMILIN1Q9Y6C2 1016 aa25.51■■□□□ 1.67
SMARCD2-212ENST00000613943 EXOSC9Q06265 439 aaKnown RBP25.5■■□□□ 1.67
SMARCD2-212ENST00000613943 PPIP5K1Q6PFW1 1433 aa25.5■■□□□ 1.67
SMARCD2-212ENST00000613943 ANKRD26Q9UPS8 1709 aa25.5■■□□□ 1.67
SMARCD2-212ENST00000613943 CEBPAP49715 358 aaPredicted RBP25.49■■□□□ 1.67
SMARCD2-212ENST00000613943 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.49■■□□□ 1.67
SMARCD2-212ENST00000613943 HMOX1P09601 288 aa25.49■■□□□ 1.67
SMARCD2-212ENST00000613943 TNRQ92752 1358 aa25.49■■□□□ 1.67
SMARCD2-212ENST00000613943 PNPLA6Q8IY17 1366 aa25.48■■□□□ 1.67
SMARCD2-212ENST00000613943 NUTM2FA1L443 756 aa25.48■■□□□ 1.67
SMARCD2-212ENST00000613943 C8orf34Q49A92 452 aa25.48■■□□□ 1.67
SMARCD2-212ENST00000613943 NUDT16Q96DE0 195 aaKnown RBP25.48■■□□□ 1.67
SMARCD2-212ENST00000613943 KIF20BQ96Q89 1820 aa25.46■■□□□ 1.67
SMARCD2-212ENST00000613943 PRKAR2BP31323 418 aa25.46■■□□□ 1.67
SMARCD2-212ENST00000613943 PCDHB15Q9Y5E8 787 aa25.46■■□□□ 1.67
SMARCD2-212ENST00000613943 ATP7BP35670 1465 aa25.46■■□□□ 1.67
SMARCD2-212ENST00000613943 RRS1Q15050 365 aaKnown RBP25.43■■□□□ 1.66
SMARCD2-212ENST00000613943 FAM161AQ3B820 660 aa25.43■■□□□ 1.66
SMARCD2-212ENST00000613943 PHACTR3Q96KR7 559 aa25.43■■□□□ 1.66
SMARCD2-212ENST00000613943 SMC4Q9NTJ3 1288 aa25.43■■□□□ 1.66
SMARCD2-212ENST00000613943 LTKP29376 864 aa25.42■■□□□ 1.66
SMARCD2-212ENST00000613943 CPSF1Q10570 1443 aaKnown RBP25.42■■□□□ 1.66
SMARCD2-212ENST00000613943 TMEM2Q9UHN6 1383 aa25.42■■□□□ 1.66
SMARCD2-212ENST00000613943 PRR36Q9H6K5 1346 aa25.42■■□□□ 1.66
SMARCD2-212ENST00000613943 RSPH6AQ9H0K4 717 aa25.42■■□□□ 1.66
SMARCD2-212ENST00000613943 ROBO2Q9HCK4 1378 aa25.42■■□□□ 1.66
SMARCD2-212ENST00000613943 SSH1Q8WYL5 1049 aa25.41■■□□□ 1.66
SMARCD2-212ENST00000613943 THUMPD2Q9BTF0 503 aaKnown RBP25.41■■□□□ 1.66
SMARCD2-212ENST00000613943 LRRC7Q96NW7 1537 aa25.41■■□□□ 1.66
SMARCD2-212ENST00000613943 LAS1LQ9Y4W2 734 aaKnown RBP25.41■■□□□ 1.66
SMARCD2-212ENST00000613943 NCBP3Q53F19 620 aaKnown RBP25.4■■□□□ 1.66
SMARCD2-212ENST00000613943 CCDC61Q9Y6R9 512 aa25.4■■□□□ 1.66
SMARCD2-212ENST00000613943 CPS1P31327 1500 aa25.39■■□□□ 1.66
SMARCD2-212ENST00000613943 SLC26A8Q96RN1 970 aa25.39■■□□□ 1.66
SMARCD2-212ENST00000613943 EDC4Q6P2E9 1401 aaKnown RBP25.39■■□□□ 1.65
SMARCD2-212ENST00000613943 FTSJ3Q8IY81 847 aaKnown RBP25.38■■□□□ 1.65
SMARCD2-212ENST00000613943 FCHSD2O94868 740 aa25.38■■□□□ 1.65
SMARCD2-212ENST00000613943 ZKSCAN2Q63HK3 967 aa25.38■■□□□ 1.65
SMARCD2-212ENST00000613943 SLC4A3P48751 1232 aa25.37■■□□□ 1.65
SMARCD2-212ENST00000613943 HDGFP51858 240 aaKnown RBP25.37■■□□□ 1.65
SMARCD2-212ENST00000613943 TRIM27P14373 513 aa25.36■■□□□ 1.65
SMARCD2-212ENST00000613943 DZIP1LQ8IYY4 767 aaKnown RBP25.36■■□□□ 1.65
SMARCD2-212ENST00000613943 MVPQ14764 893 aaKnown RBP25.35■■□□□ 1.65
SMARCD2-212ENST00000613943 COG3Q96JB2 828 aa25.35■■□□□ 1.65
SMARCD2-212ENST00000613943 ADAMTS13Q76LX8 1427 aa25.35■■□□□ 1.65
SMARCD2-212ENST00000613943 MAP2P11137 1827 aaKnown RBP25.35■■□□□ 1.65
SMARCD2-212ENST00000613943 FAM135BQ49AJ0 1406 aa25.34■■□□□ 1.65
SMARCD2-212ENST00000613943 IL13P35225 146 aa25.34■■□□□ 1.65
SMARCD2-212ENST00000613943 NOB1Q9ULX3 412 aaKnown RBP25.34■■□□□ 1.65
SMARCD2-212ENST00000613943 UBR1Q8IWV7 1749 aa25.34■■□□□ 1.65
SMARCD2-212ENST00000613943 TECPR2O15040 1411 aa25.33■■□□□ 1.65
SMARCD2-212ENST00000613943 PNNQ9H307 717 aaKnown RBP25.32■■□□□ 1.64
SMARCD2-212ENST00000613943 ITPRIPQ8IWB1 547 aa25.31■■□□□ 1.64
SMARCD2-212ENST00000613943 CDC42BPGQ6DT37 1551 aa25.3■■□□□ 1.64
SMARCD2-212ENST00000613943 IL16Q14005 1332 aa25.3■■□□□ 1.64
SMARCD2-212ENST00000613943 SOX12O15370 315 aa25.3■■□□□ 1.64
SMARCD2-212ENST00000613943 NEFMP07197 916 aa25.3■■□□□ 1.64
SMARCD2-212ENST00000613943 PMFBP1Q8TBY8 1022 aa25.3■■□□□ 1.64
SMARCD2-212ENST00000613943 CT47B1P0C2W7 299 aaPredicted RBP25.29■■□□□ 1.64
SMARCD2-212ENST00000613943 SEC24BO95487 1268 aa25.28■■□□□ 1.64
SMARCD2-212ENST00000613943 NFE2L2Q16236 605 aa25.28■■□□□ 1.64
SMARCD2-212ENST00000613943 ATF7IPQ6VMQ6 1270 aa25.28■■□□□ 1.64
SMARCD2-212ENST00000613943 PDZRN3Q9UPQ7 1066 aa25.28■■□□□ 1.64
SMARCD2-212ENST00000613943 ELL2O00472 640 aaPredicted RBP25.28■■□□□ 1.64
SMARCD2-212ENST00000613943 FAM83GA6ND36 823 aa25.27■■□□□ 1.64
SMARCD2-212ENST00000613943 SIRT1Q96EB6 747 aa25.27■■□□□ 1.64
SMARCD2-212ENST00000613943 ACEP12821 1306 aa25.27■■□□□ 1.64
SMARCD2-212ENST00000613943 KNDC1Q76NI1 1749 aa25.26■■□□□ 1.63
SMARCD2-212ENST00000613943 TMEM57Q8N5G2 664 aa25.26■■□□□ 1.63
SMARCD2-212ENST00000613943 PTPRUQ92729 1446 aa25.25■■□□□ 1.63
SMARCD2-212ENST00000613943 DCTN1Q14203 1278 aa25.25■■□□□ 1.63
SMARCD2-212ENST00000613943 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.25■■□□□ 1.63
SMARCD2-212ENST00000613943 TSPYL6Q8N831 410 aa25.25■■□□□ 1.63
SMARCD2-212ENST00000613943 AEBP1Q8IUX7 1158 aa25.24■■□□□ 1.63
SMARCD2-212ENST00000613943 CDK12Q9NYV4 1490 aaPredicted RBP25.24■■□□□ 1.63
SMARCD2-212ENST00000613943 AATKQ6ZMQ8 1374 aa25.23■■□□□ 1.63
SMARCD2-212ENST00000613943 PLEKHG1Q9ULL1 1385 aa25.23■■□□□ 1.63
SMARCD2-212ENST00000613943 DDRGK1Q96HY6 314 aa25.23■■□□□ 1.63
SMARCD2-212ENST00000613943 RWDD1Q9H446 243 aaPredicted RBP25.23■■□□□ 1.63
SMARCD2-212ENST00000613943 MON2Q7Z3U7 1717 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms