RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 RDH13Q8NBN7 331 aa7.37□□□□□ -1.23
CCL16-206ENST00000613642 ANP32AP39687 249 aaKnown RBP7.36□□□□□ -1.23
CCL16-206ENST00000613642 SULF1Q8IWU6 871 aa7.36□□□□□ -1.23
CCL16-206ENST00000613642 NLRP7Q8WX94 980 aa7.36□□□□□ -1.23
CCL16-206ENST00000613642 SLC27A5Q9Y2P5 690 aa7.36□□□□□ -1.23
CCL16-206ENST00000613642 MMP14P50281 582 aa7.35□□□□□ -1.23
CCL16-206ENST00000613642 BRICD5Q6PL45 260 aa7.35□□□□□ -1.23
CCL16-206ENST00000613642 FAM43AQ8N2R8 423 aa7.35□□□□□ -1.23
CCL16-206ENST00000613642 GPATCH11Q8N954 259 aa7.35□□□□□ -1.23
CCL16-206ENST00000613642 TRIM44Q96DX7 344 aaPredicted RBP7.35□□□□□ -1.23
CCL16-206ENST00000613642 PRDM16Q9HAZ2 1276 aa7.35□□□□□ -1.23
CCL16-206ENST00000613642 PRDM4Q9UKN5 801 aa7.35□□□□□ -1.23
CCL16-206ENST00000613642 FCF1Q9Y324 198 aaKnown RBP7.35□□□□□ -1.23
CCL16-206ENST00000613642 FMNL1O95466 1100 aaPredicted RBP7.34□□□□□ -1.23
CCL16-206ENST00000613642 AAASQ9NRG9 546 aa7.34□□□□□ -1.23
CCL16-206ENST00000613642 CD2BP2O95400 341 aaKnown RBP7.33□□□□□ -1.24
CCL16-206ENST00000613642 FOXC1Q12948 553 aa7.33□□□□□ -1.24
CCL16-206ENST00000613642 CWC22Q9HCG8 908 aaKnown RBP7.33□□□□□ -1.24
CCL16-206ENST00000613642 TOR4AQ9NXH8 423 aa7.33□□□□□ -1.24
CCL16-206ENST00000613642 KCNG1Q9UIX4 513 aa7.33□□□□□ -1.24
CCL16-206ENST00000613642 ST8SIA5O15466 376 aa7.32□□□□□ -1.24
CCL16-206ENST00000613642 AVPP01185 164 aa7.32□□□□□ -1.24
CCL16-206ENST00000613642 MSS51Q4VC12 460 aa7.32□□□□□ -1.24
CCL16-206ENST00000613642 CRIPAKQ8N1N5 446 aa7.32□□□□□ -1.24
CCL16-206ENST00000613642 CEP120Q8N960 986 aa7.32□□□□□ -1.24
CCL16-206ENST00000613642 RGS22Q8NE09 1264 aa7.32□□□□□ -1.24
CCL16-206ENST00000613642 PATL2C9JE40 543 aaKnown RBP7.31□□□□□ -1.24
CCL16-206ENST00000613642 HSP90AA1P07900 732 aaKnown RBP7.31□□□□□ -1.24
CCL16-206ENST00000613642 IRX3P78415 501 aaPredicted RBP7.31□□□□□ -1.24
CCL16-206ENST00000613642 GPIHBP1Q8IV16 184 aa7.31□□□□□ -1.24
CCL16-206ENST00000613642 PRDM9Q9NQV7 894 aa7.31□□□□□ -1.24
CCL16-206ENST00000613642 WASHC2CQ9Y4E1 1318 aa7.3□□□□□ -1.24
CCL16-206ENST00000613642 RNF19BQ6ZMZ0 732 aa7.3□□□□□ -1.24
CCL16-206ENST00000613642 FAM43BQ6ZT52 329 aaPredicted RBP7.3□□□□□ -1.24
CCL16-206ENST00000613642 USP35Q9P2H5 1018 aa7.3□□□□□ -1.24
CCL16-206ENST00000613642 MYO15BQ96JP2 1530 aa7.3□□□□□ -1.24
CCL16-206ENST00000613642 ZNF526Q8TF50 670 aaPredicted RBP7.29□□□□□ -1.24
CCL16-206ENST00000613642 CD46P15529 392 aa7.28□□□□□ -1.24
CCL16-206ENST00000613642 OS9Q13438 667 aaPredicted RBP7.28□□□□□ -1.24
CCL16-206ENST00000613642 CCDC27Q2M243 656 aa7.28□□□□□ -1.24
CCL16-206ENST00000613642 CYP4X1Q8N118 509 aa7.28□□□□□ -1.24
CCL16-206ENST00000613642 MMP16P51512 607 aa7.27□□□□□ -1.25
CCL16-206ENST00000613642 HSP90AB4PQ58FF6 505 aa7.27□□□□□ -1.25
CCL16-206ENST00000613642 LCE2AQ5TA79 106 aaPredicted RBP7.27□□□□□ -1.25
CCL16-206ENST00000613642 DACH1Q9UI36 760 aa7.27□□□□□ -1.25
CCL16-206ENST00000613642 ZBTB24O43167 697 aaPredicted RBP7.26□□□□□ -1.25
CCL16-206ENST00000613642 SMCPP49901 116 aaPredicted RBP7.26□□□□□ -1.25
CCL16-206ENST00000613642 MAP2K5Q13163 448 aa7.26□□□□□ -1.25
CCL16-206ENST00000613642 CTC1Q2NKJ3 1217 aa7.26□□□□□ -1.25
CCL16-206ENST00000613642 NBPF20Q3BBV1 942 aa7.26□□□□□ -1.25
CCL16-206ENST00000613642 Q3C1V9 767 aa7.26□□□□□ -1.25
CCL16-206ENST00000613642 HDAC5Q9UQL6 1122 aa7.26□□□□□ -1.25
CCL16-206ENST00000613642 WNT7AO00755 349 aa7.25□□□□□ -1.25
CCL16-206ENST00000613642 AXIN1O15169 862 aa7.25□□□□□ -1.25
CCL16-206ENST00000613642 APPP05067 770 aa7.25□□□□□ -1.25
CCL16-206ENST00000613642 TAF3Q5VWG9 929 aa7.25□□□□□ -1.25
CCL16-206ENST00000613642 FAM177A1Q8N128 213 aaPredicted RBP7.25□□□□□ -1.25
CCL16-206ENST00000613642 PDCL3Q9H2J4 239 aa7.25□□□□□ -1.25
CCL16-206ENST00000613642 LAS1LQ9Y4W2 734 aaKnown RBP7.25□□□□□ -1.25
CCL16-206ENST00000613642 PLEKHD1A6NEE1 506 aa7.24□□□□□ -1.25
CCL16-206ENST00000613642 IRF6O14896 467 aa7.24□□□□□ -1.25
CCL16-206ENST00000613642 KDM4AO75164 1064 aa7.24□□□□□ -1.25
CCL16-206ENST00000613642 TREML4Q6UXN2 200 aa7.24□□□□□ -1.25
CCL16-206ENST00000613642 WASHC2AQ641Q2 1341 aa7.24□□□□□ -1.25
CCL16-206ENST00000613642 TTC36A6NLP5 189 aa7.23□□□□□ -1.25
CCL16-206ENST00000613642 TRIM32Q13049 653 aa7.23□□□□□ -1.25
CCL16-206ENST00000613642 NBPF11Q86T75 865 aa7.23□□□□□ -1.25
CCL16-206ENST00000613642 SMAP1Q8IYB5 467 aaPredicted RBP7.23□□□□□ -1.25
CCL16-206ENST00000613642 USB1Q9BQ65 265 aaKnown RBP7.23□□□□□ -1.25
CCL16-206ENST00000613642 GMPR2Q9P2T1 348 aaKnown RBP7.23□□□□□ -1.25
CCL16-206ENST00000613642 TTC24A2A3L6 582 aaPredicted RBP7.22□□□□□ -1.25
CCL16-206ENST00000613642 DXOO77932 396 aaKnown RBP7.22□□□□□ -1.25
CCL16-206ENST00000613642 USP46P62068 366 aa7.22□□□□□ -1.25
CCL16-206ENST00000613642 NBPF1Q3BBV0 1214 aa7.22□□□□□ -1.25
CCL16-206ENST00000613642 SNIP1Q8TAD8 396 aaKnown RBP7.22□□□□□ -1.25
CCL16-206ENST00000613642 NOP58Q9Y2X3 529 aaKnown RBP7.22□□□□□ -1.25
CCL16-206ENST00000613642 MINK1Q8N4C8 1332 aaPredicted RBP7.22□□□□□ -1.25
CCL16-206ENST00000613642 RAD21O60216 631 aa7.21□□□□□ -1.26
CCL16-206ENST00000613642 SMPD1P17405 629 aa7.21□□□□□ -1.26
CCL16-206ENST00000613642 UTP14CQ5TAP6 766 aaKnown RBP7.21□□□□□ -1.26
CCL16-206ENST00000613642 CASC1Q6TDU7 716 aa7.21□□□□□ -1.26
CCL16-206ENST00000613642 RGS3P49796 1198 aa7.2□□□□□ -1.26
CCL16-206ENST00000613642 MDM2Q00987 491 aaPredicted RBP7.2□□□□□ -1.26
CCL16-206ENST00000613642 CC2D1BQ5T0F9 858 aaKnown RBP7.2□□□□□ -1.26
CCL16-206ENST00000613642 EXOC8Q8IYI6 725 aa7.2□□□□□ -1.26
CCL16-206ENST00000613642 HLA-CQ95604 372 aa7.2□□□□□ -1.26
CCL16-206ENST00000613642 MRGPRX2Q96LB1 330 aa7.2□□□□□ -1.26
CCL16-206ENST00000613642 MAP7D2Q96T17 732 aa7.2□□□□□ -1.26
CCL16-206ENST00000613642 HOXA2O43364 376 aa7.19□□□□□ -1.26
CCL16-206ENST00000613642 KCTD17Q8N5Z5 321 aa7.19□□□□□ -1.26
CCL16-206ENST00000613642 ZNF830Q96NB3 372 aaPredicted RBP7.19□□□□□ -1.26
CCL16-206ENST00000613642 TMEM51Q9NW97 253 aa7.19□□□□□ -1.26
CCL16-206ENST00000613642 J3QL48 77 aa7.18□□□□□ -1.26
CCL16-206ENST00000613642 TNNT2P45379 298 aaPredicted RBP7.18□□□□□ -1.26
CCL16-206ENST00000613642 YY1AP1Q9H869 796 aa7.18□□□□□ -1.26
CCL16-206ENST00000613642 REPIN1Q9BWE0 567 aaKnown RBP7.17□□□□□ -1.26
CCL16-206ENST00000613642 TCERG1O14776 1098 aaKnown RBP7.16□□□□□ -1.26
CCL16-206ENST00000613642 WFS1O76024 890 aa7.16□□□□□ -1.26
CCL16-206ENST00000613642 RBM25P49756 843 aaKnown RBP7.16□□□□□ -1.26
CCL16-206ENST00000613642 SKOR1P84550 965 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms