RNA–Protein interactions for RNA: ENST00000613098.4

PPARGC1A-217, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1A, Length 3,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-217ENST00000613098 A0A1W2PP64 1363 aa9.49□□□□□ -0.89
PPARGC1A-217ENST00000613098 CFAP65Q6ZU64 1925 aaKnown RBP9.49□□□□□ -0.89
PPARGC1A-217ENST00000613098 XRCC6P12956 609 aaKnown RBP eCLIP9.49□□□□□ -0.89
PPARGC1A-217ENST00000613098 EXOSC9Q06265 439 aaKnown RBP9.49□□□□□ -0.89
PPARGC1A-217ENST00000613098 ABCC11Q96J66 1382 aa9.49□□□□□ -0.89
PPARGC1A-217ENST00000613098 SMC5Q8IY18 1101 aa9.48□□□□□ -0.89
PPARGC1A-217ENST00000613098 DZIP1LQ8IYY4 767 aaKnown RBP9.48□□□□□ -0.89
PPARGC1A-217ENST00000613098 RWDD1Q9H446 243 aaPredicted RBP9.48□□□□□ -0.89
PPARGC1A-217ENST00000613098 CABP2Q9NPB3 220 aa9.48□□□□□ -0.89
PPARGC1A-217ENST00000613098 TMPOP42166 694 aaKnown RBP9.48□□□□□ -0.89
PPARGC1A-217ENST00000613098 BECN1Q14457 450 aa9.48□□□□□ -0.89
PPARGC1A-217ENST00000613098 ZKSCAN2Q63HK3 967 aa9.48□□□□□ -0.89
PPARGC1A-217ENST00000613098 ZBTB40Q9NUA8 1239 aa9.48□□□□□ -0.89
PPARGC1A-217ENST00000613098 NSD2O96028 1365 aa9.47□□□□□ -0.89
PPARGC1A-217ENST00000613098 NUTM2DQ5VT03 806 aaPredicted RBP9.47□□□□□ -0.89
PPARGC1A-217ENST00000613098 KIF2CQ99661 725 aa9.47□□□□□ -0.89
PPARGC1A-217ENST00000613098 PNPLA6Q8IY17 1366 aa9.47□□□□□ -0.89
PPARGC1A-217ENST00000613098 U2AF1L5P0DN76 240 aaPredicted RBP9.47□□□□□ -0.89
PPARGC1A-217ENST00000613098 MCM4P33991 863 aa9.47□□□□□ -0.89
PPARGC1A-217ENST00000613098 U2AF1Q01081 240 aaKnown RBP eCLIP9.47□□□□□ -0.89
PPARGC1A-217ENST00000613098 SPRYD3Q8NCJ5 442 aa9.47□□□□□ -0.89
PPARGC1A-217ENST00000613098 PANK2Q9BZ23 570 aa9.47□□□□□ -0.89
PPARGC1A-217ENST00000613098 MLH3Q9UHC1 1453 aa9.47□□□□□ -0.89
PPARGC1A-217ENST00000613098 RICTORQ6R327 1708 aa9.46□□□□□ -0.89
PPARGC1A-217ENST00000613098 MYH16Q9H6N6 1097 aa9.46□□□□□ -0.89
PPARGC1A-217ENST00000613098 POGZQ7Z3K3 1410 aa9.46□□□□□ -0.89
PPARGC1A-217ENST00000613098 RPGRIP1LQ68CZ1 1315 aa9.46□□□□□ -0.89
PPARGC1A-217ENST00000613098 TMEM57Q8N5G2 664 aa9.46□□□□□ -0.89
PPARGC1A-217ENST00000613098 C22orf23Q9BZE7 217 aa9.46□□□□□ -0.89
PPARGC1A-217ENST00000613098 NOB1Q9ULX3 412 aaKnown RBP9.46□□□□□ -0.89
PPARGC1A-217ENST00000613098 FYB1O15117 783 aa9.46□□□□□ -0.9
PPARGC1A-217ENST00000613098 CT47B1P0C2W7 299 aaPredicted RBP9.45□□□□□ -0.9
PPARGC1A-217ENST00000613098 CHGAP10645 457 aaKnown RBP9.45□□□□□ -0.9
PPARGC1A-217ENST00000613098 ATF7IPQ6VMQ6 1270 aa9.45□□□□□ -0.9
PPARGC1A-217ENST00000613098 STRCQ7RTU9 1775 aa9.45□□□□□ -0.9
PPARGC1A-217ENST00000613098 ANKRD26Q9UPS8 1709 aa9.45□□□□□ -0.9
PPARGC1A-217ENST00000613098 ZNF142P52746 1687 aaPredicted RBP9.45□□□□□ -0.9
PPARGC1A-217ENST00000613098 GGNBP2Q9H3C7 697 aa9.44□□□□□ -0.9
PPARGC1A-217ENST00000613098 LTBP4Q8N2S1 1624 aa9.44□□□□□ -0.9
PPARGC1A-217ENST00000613098 MED14O60244 1454 aa9.44□□□□□ -0.9
PPARGC1A-217ENST00000613098 EVC2Q86UK5 1308 aa9.44□□□□□ -0.9
PPARGC1A-217ENST00000613098 CD2BP2O95400 341 aaKnown RBP9.44□□□□□ -0.9
PPARGC1A-217ENST00000613098 RBM25P49756 843 aaKnown RBP9.44□□□□□ -0.9
PPARGC1A-217ENST00000613098 CLTCQ00610 1675 aaKnown RBP9.44□□□□□ -0.9
PPARGC1A-217ENST00000613098 MFAP1P55081 439 aaKnown RBP9.44□□□□□ -0.9
PPARGC1A-217ENST00000613098 NUCB1Q02818 461 aa9.44□□□□□ -0.9
PPARGC1A-217ENST00000613098 SMC4Q9NTJ3 1288 aa9.44□□□□□ -0.9
PPARGC1A-217ENST00000613098 CDC42BPGQ6DT37 1551 aa9.43□□□□□ -0.9
PPARGC1A-217ENST00000613098 IL16Q14005 1332 aa9.43□□□□□ -0.9
PPARGC1A-217ENST00000613098 GGT6Q6P531 493 aa9.43□□□□□ -0.9
PPARGC1A-217ENST00000613098 CFAP53Q96M91 514 aa9.43□□□□□ -0.9
PPARGC1A-217ENST00000613098 FBLN1P23142 703 aa9.43□□□□□ -0.9
PPARGC1A-217ENST00000613098 ZFYVE9O95405 1425 aa9.42□□□□□ -0.9
PPARGC1A-217ENST00000613098 PPIP5K1Q6PFW1 1433 aa9.42□□□□□ -0.9
PPARGC1A-217ENST00000613098 SIRT2Q8IXJ6 389 aa9.42□□□□□ -0.9
PPARGC1A-217ENST00000613098 LRRC7Q96NW7 1537 aa9.42□□□□□ -0.9
PPARGC1A-217ENST00000613098 MYO5BQ9ULV0 1848 aa9.42□□□□□ -0.9
PPARGC1A-217ENST00000613098 IDI1Q13907 227 aa9.42□□□□□ -0.9
PPARGC1A-217ENST00000613098 SAFB2Q14151 953 aaKnown RBP eCLIP9.42□□□□□ -0.9
PPARGC1A-217ENST00000613098 ITPRIPQ8IWB1 547 aa9.42□□□□□ -0.9
PPARGC1A-217ENST00000613098 FTSJ3Q8IY81 847 aaKnown RBP9.42□□□□□ -0.9
PPARGC1A-217ENST00000613098 DDX19BQ9UMR2 479 aa9.42□□□□□ -0.9
PPARGC1A-217ENST00000613098 BRPF1P55201 1214 aaPredicted RBP9.41□□□□□ -0.9
PPARGC1A-217ENST00000613098 CHMP5Q9NZZ3 219 aa9.41□□□□□ -0.9
PPARGC1A-217ENST00000613098 ZBTB7BO15156 539 aaPredicted RBP9.41□□□□□ -0.9
PPARGC1A-217ENST00000613098 TRAK2O60296 914 aa9.41□□□□□ -0.9
PPARGC1A-217ENST00000613098 UPF2Q9HAU5 1272 aaKnown RBP9.41□□□□□ -0.9
PPARGC1A-217ENST00000613098 GAS2L3Q86XJ1 694 aa9.41□□□□□ -0.9
PPARGC1A-217ENST00000613098 SNX21Q969T3 373 aa9.41□□□□□ -0.9
PPARGC1A-217ENST00000613098 GZF1Q9H116 711 aaPredicted RBP9.41□□□□□ -0.9
PPARGC1A-217ENST00000613098 TMEM131LA2VDJ0 1609 aa9.41□□□□□ -0.9
PPARGC1A-217ENST00000613098 PIK3R4Q99570 1358 aa9.4□□□□□ -0.9
PPARGC1A-217ENST00000613098 FAM135BQ49AJ0 1406 aa9.4□□□□□ -0.9
PPARGC1A-217ENST00000613098 RIPK4P57078 832 aa9.4□□□□□ -0.9
PPARGC1A-217ENST00000613098 KNDC1Q76NI1 1749 aa9.4□□□□□ -0.9
PPARGC1A-217ENST00000613098 ERBB4Q15303 1308 aa9.4□□□□□ -0.9
PPARGC1A-217ENST00000613098 ARHGAP31Q2M1Z3 1444 aa9.4□□□□□ -0.9
PPARGC1A-217ENST00000613098 U2SURPO15042 1029 aaKnown RBP9.4□□□□□ -0.91
PPARGC1A-217ENST00000613098 PHACTR3Q96KR7 559 aa9.4□□□□□ -0.91
PPARGC1A-217ENST00000613098 RSPH6AQ9H0K4 717 aa9.4□□□□□ -0.91
PPARGC1A-217ENST00000613098 DIP2CQ9Y2E4 1556 aa9.4□□□□□ -0.91
PPARGC1A-217ENST00000613098 L1TD1Q5T7N2 865 aaKnown RBP9.39□□□□□ -0.91
PPARGC1A-217ENST00000613098 TSPYL6Q8N831 410 aa9.39□□□□□ -0.91
PPARGC1A-217ENST00000613098 VGFO15240 615 aaPredicted RBP9.39□□□□□ -0.91
PPARGC1A-217ENST00000613098 FAM69CQ0P6D2 419 aa9.39□□□□□ -0.91
PPARGC1A-217ENST00000613098 CHD1LQ86WJ1 897 aa9.39□□□□□ -0.91
PPARGC1A-217ENST00000613098 LNPKQ9C0E8 428 aa9.39□□□□□ -0.91
PPARGC1A-217ENST00000613098 VAMP4O75379 141 aa9.39□□□□□ -0.91
PPARGC1A-217ENST00000613098 GOLGA6L3A6NEY3 463 aa9.38□□□□□ -0.91
PPARGC1A-217ENST00000613098 ALDH1L2Q3SY69 923 aa9.38□□□□□ -0.91
PPARGC1A-217ENST00000613098 TNPO1Q92973 898 aaKnown RBP9.38□□□□□ -0.91
PPARGC1A-217ENST00000613098 MRPL50Q8N5N7 158 aaKnown RBP9.38□□□□□ -0.91
PPARGC1A-217ENST00000613098 RBM42Q9BTD8 480 aaKnown RBP9.38□□□□□ -0.91
PPARGC1A-217ENST00000613098 SENP3Q9H4L4 574 aaPredicted RBP9.38□□□□□ -0.91
PPARGC1A-217ENST00000613098 PTCH1Q13635 1447 aa9.38□□□□□ -0.91
PPARGC1A-217ENST00000613098 RAPGEF3O95398 923 aa9.37□□□□□ -0.91
PPARGC1A-217ENST00000613098 ZNF853P0CG23 659 aa9.37□□□□□ -0.91
PPARGC1A-217ENST00000613098 UBE2Q2Q8WVN8 375 aa9.37□□□□□ -0.91
PPARGC1A-217ENST00000613098 ARXQ96QS3 562 aa9.37□□□□□ -0.91
PPARGC1A-217ENST00000613098 THUMPD2Q9BTF0 503 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms