RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 PSEN1P49768 467 aa12.18□□□□□ -0.46
CCDC47-207ENST00000612558 STK26Q9P289 416 aa12.18□□□□□ -0.46
CCDC47-207ENST00000612558 QRICH2Q9H0J4 1663 aa12.18□□□□□ -0.46
CCDC47-207ENST00000612558 ARHGEF28Q8N1W1 1705 aaKnown RBP12.18□□□□□ -0.46
CCDC47-207ENST00000612558 KTN1Q86UP2 1357 aaKnown RBP12.18□□□□□ -0.46
CCDC47-207ENST00000612558 PUS7Q96PZ0 661 aaKnown RBP12.18□□□□□ -0.46
CCDC47-207ENST00000612558 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.18□□□□□ -0.462e-8■■■□□ 18.3
CCDC47-207ENST00000612558 EID1Q9Y6B2 187 aa12.18□□□□□ -0.46
CCDC47-207ENST00000612558 PTPRMP28827 1452 aa12.17□□□□□ -0.46
CCDC47-207ENST00000612558 TXNDC2Q86VQ3 553 aa12.17□□□□□ -0.46
CCDC47-207ENST00000612558 SETD1BQ9UPS6 1966 aaKnown RBP12.17□□□□□ -0.46
CCDC47-207ENST00000612558 SLIT1O75093 1534 aa12.16□□□□□ -0.46
CCDC47-207ENST00000612558 LRPPRCP42704 1394 aaKnown RBP12.16□□□□□ -0.46
CCDC47-207ENST00000612558 EVC2Q86UK5 1308 aa12.16□□□□□ -0.46
CCDC47-207ENST00000612558 LTKP29376 864 aa12.16□□□□□ -0.46
CCDC47-207ENST00000612558 RALBP1Q15311 655 aa12.16□□□□□ -0.46
CCDC47-207ENST00000612558 PDCD7Q8N8D1 485 aaKnown RBP12.16□□□□□ -0.46
CCDC47-207ENST00000612558 BCANQ96GW7 911 aa12.16□□□□□ -0.46
CCDC47-207ENST00000612558 SETD1AO15047 1707 aaKnown RBP12.16□□□□□ -0.46
CCDC47-207ENST00000612558 NRXN3Q9Y4C0 1643 aa12.16□□□□□ -0.46
CCDC47-207ENST00000612558 ARHGAP23Q9P227 1491 aa12.15□□□□□ -0.46
CCDC47-207ENST00000612558 ABCC11Q96J66 1382 aa12.15□□□□□ -0.46
CCDC47-207ENST00000612558 PLEKHG1Q9ULL1 1385 aa12.15□□□□□ -0.46
CCDC47-207ENST00000612558 POGKQ9P215 609 aa12.15□□□□□ -0.46
CCDC47-207ENST00000612558 PDAP1Q13442 181 aaKnown RBP12.14□□□□□ -0.47
CCDC47-207ENST00000612558 PRAM1Q96QH2 718 aa12.14□□□□□ -0.47
CCDC47-207ENST00000612558 DLC1Q96QB1 1528 aa12.14□□□□□ -0.47
CCDC47-207ENST00000612558 SPOCK2Q92563 424 aa12.13□□□□□ -0.47
CCDC47-207ENST00000612558 KNSTRNQ9Y448 316 aa12.13□□□□□ -0.47
CCDC47-207ENST00000612558 METP08581 1390 aa12.13□□□□□ -0.47
CCDC47-207ENST00000612558 CNGB1Q14028 1251 aaPredicted RBP12.13□□□□□ -0.47
CCDC47-207ENST00000612558 SAFB2Q14151 953 aaKnown RBP eCLIP12.13□□□□□ -0.47
CCDC47-207ENST00000612558 SIRT1Q96EB6 747 aa12.13□□□□□ -0.47
CCDC47-207ENST00000612558 MYOM1P52179 1685 aa12.12□□□□□ -0.47
CCDC47-207ENST00000612558 MRS2Q9HD23 443 aa12.12□□□□□ -0.47
CCDC47-207ENST00000612558 ADAMTS13Q76LX8 1427 aa12.12□□□□□ -0.47
CCDC47-207ENST00000612558 CEP170BQ9Y4F5 1589 aaPredicted RBP12.12□□□□□ -0.47
CCDC47-207ENST00000612558 MYBBP1AQ9BQG0 1328 aaKnown RBP12.11□□□□□ -0.47
CCDC47-207ENST00000612558 G3V3G9 751 aa12.11□□□□□ -0.47
CCDC47-207ENST00000612558 CCDC184Q52MB2 194 aa12.11□□□□□ -0.47
CCDC47-207ENST00000612558 PARD3Q8TEW0 1356 aa12.11□□□□□ -0.47
CCDC47-207ENST00000612558 CIZ1Q9ULV3 898 aaPredicted RBP12.1□□□□□ -0.47
CCDC47-207ENST00000612558 TULP4Q9NRJ4 1543 aa12.1□□□□□ -0.47
CCDC47-207ENST00000612558 MED14O60244 1454 aa12.1□□□□□ -0.47
CCDC47-207ENST00000612558 MINK1Q8N4C8 1332 aaPredicted RBP12.1□□□□□ -0.47
CCDC47-207ENST00000612558 TECPR2O15040 1411 aa12.1□□□□□ -0.47
CCDC47-207ENST00000612558 FAM135BQ49AJ0 1406 aa12.1□□□□□ -0.47
CCDC47-207ENST00000612558 TMC1Q8TDI8 760 aa12.09□□□□□ -0.47
CCDC47-207ENST00000612558 TBX22Q9Y458 520 aa12.09□□□□□ -0.47
CCDC47-207ENST00000612558 NPC1L1Q9UHC9 1359 aa12.09□□□□□ -0.47
CCDC47-207ENST00000612558 AMER1Q5JTC6 1135 aaPredicted RBP12.09□□□□□ -0.47
CCDC47-207ENST00000612558 CC2D1BQ5T0F9 858 aaKnown RBP12.09□□□□□ -0.47
CCDC47-207ENST00000612558 WAPLQ7Z5K2 1190 aa12.09□□□□□ -0.47
CCDC47-207ENST00000612558 CABP2Q9NPB3 220 aa12.09□□□□□ -0.47
CCDC47-207ENST00000612558 KNDC1Q76NI1 1749 aa12.08□□□□□ -0.48
CCDC47-207ENST00000612558 SRPK2P78362 688 aaKnown RBP12.08□□□□□ -0.48
CCDC47-207ENST00000612558 SLC26A8Q96RN1 970 aa12.08□□□□□ -0.48
CCDC47-207ENST00000612558 SLC12A5Q9H2X9 1139 aa12.08□□□□□ -0.48
CCDC47-207ENST00000612558 BRD4O60885 1362 aaPredicted RBP12.08□□□□□ -0.48
CCDC47-207ENST00000612558 NINLQ9Y2I6 1382 aa12.08□□□□□ -0.48
CCDC47-207ENST00000612558 ZNF142P52746 1687 aaPredicted RBP12.08□□□□□ -0.48
CCDC47-207ENST00000612558 ATAD2Q6PL18 1390 aa12.07□□□□□ -0.48
CCDC47-207ENST00000612558 NLRP13Q86W25 1043 aa12.07□□□□□ -0.48
CCDC47-207ENST00000612558 ANKLE2Q86XL3 938 aa12.07□□□□□ -0.48
CCDC47-207ENST00000612558 MARVELD3Q96A59 401 aa12.07□□□□□ -0.48
CCDC47-207ENST00000612558 CDK19Q9BWU1 502 aa12.07□□□□□ -0.48
CCDC47-207ENST00000612558 CARD14Q9BXL6 1004 aa12.07□□□□□ -0.48
CCDC47-207ENST00000612558 PLEKHH1Q9ULM0 1364 aa12.06□□□□□ -0.48
CCDC47-207ENST00000612558 CPS1P31327 1500 aa12.06□□□□□ -0.48
CCDC47-207ENST00000612558 DIP2AQ14689 1571 aa12.06□□□□□ -0.48
CCDC47-207ENST00000612558 FAM9BQ8IZU0 186 aa12.05□□□□□ -0.48
CCDC47-207ENST00000612558 EMP3P54852 163 aa12.05□□□□□ -0.48
CCDC47-207ENST00000612558 ANKRD36BQ8N2N9 1353 aa12.04□□□□□ -0.48
CCDC47-207ENST00000612558 AMOTL2Q9Y2J4 779 aa12.04□□□□□ -0.48
CCDC47-207ENST00000612558 PIK3R4Q99570 1358 aa12.03□□□□□ -0.48
CCDC47-207ENST00000612558 ROBO2Q9HCK4 1378 aa12.03□□□□□ -0.48
CCDC47-207ENST00000612558 PTPRUQ92729 1446 aa12.03□□□□□ -0.48
CCDC47-207ENST00000612558 WASLO00401 505 aaPredicted RBP12.03□□□□□ -0.48
CCDC47-207ENST00000612558 PNISRQ8TF01 805 aaKnown RBP12.03□□□□□ -0.48
CCDC47-207ENST00000612558 NSD3Q9BZ95 1437 aa12.02□□□□□ -0.48
CCDC47-207ENST00000612558 SPNS2Q8IVW8 549 aa12.02□□□□□ -0.49
CCDC47-207ENST00000612558 TERF2IPQ9NYB0 399 aa12.02□□□□□ -0.49
CCDC47-207ENST00000612558 HNRNPUQ00839 825 aaKnown RBP eCLIP12.01□□□□□ -0.49
CCDC47-207ENST00000612558 ILDR1Q86SU0 546 aaPredicted RBP12.01□□□□□ -0.49
CCDC47-207ENST00000612558 PPP2R1AP30153 589 aa12.01□□□□□ -0.49
CCDC47-207ENST00000612558 MMRN1Q13201 1228 aa12.01□□□□□ -0.49
CCDC47-207ENST00000612558 IFNLR1Q8IU57 520 aaPredicted RBP12.01□□□□□ -0.49
CCDC47-207ENST00000612558 CGNL1Q0VF96 1302 aa12□□□□□ -0.49
CCDC47-207ENST00000612558 PTCH1Q13635 1447 aa12□□□□□ -0.49
CCDC47-207ENST00000612558 HDGFL2Q7Z4V5 671 aaPredicted RBP12□□□□□ -0.49
CCDC47-207ENST00000612558 CABP1Q9NZU7 370 aa12□□□□□ -0.49
CCDC47-207ENST00000612558 USP32Q8NFA0 1604 aa11.99□□□□□ -0.49
CCDC47-207ENST00000612558 BOLA1Q9Y3E2 137 aa11.99□□□□□ -0.49
CCDC47-207ENST00000612558 A0A1W2PP64 1363 aa11.99□□□□□ -0.49
CCDC47-207ENST00000612558 NSD2O96028 1365 aa11.98□□□□□ -0.49
CCDC47-207ENST00000612558 ADGRB2O60241 1585 aa11.97□□□□□ -0.49
CCDC47-207ENST00000612558 NPHP4O75161 1426 aaPredicted RBP11.97□□□□□ -0.49
CCDC47-207ENST00000612558 MORC1Q86VD1 984 aa11.97□□□□□ -0.49
CCDC47-207ENST00000612558 NUDT16Q96DE0 195 aaKnown RBP11.97□□□□□ -0.49
CCDC47-207ENST00000612558 CD163L1Q9NR16 1453 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms