RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 PPM1GO15355 546 aaPredicted RBP17.71■□□□□ 0.43
NEK3-205ENST00000610828 CCDC61Q9Y6R9 512 aa17.71■□□□□ 0.43
NEK3-205ENST00000610828 ADGRB2O60241 1585 aa17.71■□□□□ 0.43
NEK3-205ENST00000610828 FBLN1P23142 703 aa17.71■□□□□ 0.42
NEK3-205ENST00000610828 C3P01024 1663 aa17.7■□□□□ 0.42
NEK3-205ENST00000610828 EDC4Q6P2E9 1401 aaKnown RBP17.7■□□□□ 0.42
NEK3-205ENST00000610828 PLEKHF1Q96S99 279 aa17.7■□□□□ 0.42
NEK3-205ENST00000610828 MAPK8IP3Q9UPT6 1336 aa17.7■□□□□ 0.42
NEK3-205ENST00000610828 PNPLA6Q8IY17 1366 aa17.7■□□□□ 0.42
NEK3-205ENST00000610828 NCBP3Q53F19 620 aaKnown RBP17.69■□□□□ 0.42
NEK3-205ENST00000610828 EID1Q9Y6B2 187 aa17.69■□□□□ 0.42
NEK3-205ENST00000610828 SLC26A8Q96RN1 970 aa17.68■□□□□ 0.42
NEK3-205ENST00000610828 CANXP27824 592 aaKnown RBP17.68■□□□□ 0.42
NEK3-205ENST00000610828 NME9Q86XW9 330 aa17.68■□□□□ 0.42
NEK3-205ENST00000610828 POLKQ9UBT6 870 aa17.68■□□□□ 0.42
NEK3-205ENST00000610828 FER1L4A9Z1Z3 1794 aa17.68■□□□□ 0.42
NEK3-205ENST00000610828 CDC42BPGQ6DT37 1551 aa17.67■□□□□ 0.42
NEK3-205ENST00000610828 TCERG1O14776 1098 aaKnown RBP17.67■□□□□ 0.42
NEK3-205ENST00000610828 TMPOP42166 694 aaKnown RBP17.67■□□□□ 0.42
NEK3-205ENST00000610828 MYH16Q9H6N6 1097 aa17.67■□□□□ 0.42
NEK3-205ENST00000610828 PRR36Q9H6K5 1346 aa17.66■□□□□ 0.42
NEK3-205ENST00000610828 MSH5O43196 834 aa17.66■□□□□ 0.42
NEK3-205ENST00000610828 ZRANB1Q9UGI0 708 aa17.65■□□□□ 0.42
NEK3-205ENST00000610828 MAP2P11137 1827 aaKnown RBP17.65■□□□□ 0.42
NEK3-205ENST00000610828 RARSP54136 660 aaKnown RBP17.65■□□□□ 0.42
NEK3-205ENST00000610828 ANP32EQ9BTT0 268 aa17.65■□□□□ 0.42
NEK3-205ENST00000610828 PNNQ9H307 717 aaKnown RBP17.65■□□□□ 0.42
NEK3-205ENST00000610828 FRAT1Q92837 279 aaPredicted RBP17.64■□□□□ 0.41
NEK3-205ENST00000610828 EMILIN1Q9Y6C2 1016 aa17.64■□□□□ 0.41
NEK3-205ENST00000610828 KDM2BQ8NHM5 1336 aa17.64■□□□□ 0.41
NEK3-205ENST00000610828 NUTM2FA1L443 756 aa17.64■□□□□ 0.41
NEK3-205ENST00000610828 COG3Q96JB2 828 aa17.64■□□□□ 0.41
NEK3-205ENST00000610828 MON2Q7Z3U7 1717 aa17.63■□□□□ 0.41
NEK3-205ENST00000610828 PDE3AQ14432 1141 aa17.63■□□□□ 0.41
NEK3-205ENST00000610828 CENPQQ7L2Z9 268 aaPredicted RBP17.63■□□□□ 0.41
NEK3-205ENST00000610828 ZNF692Q9BU19 519 aaPredicted RBP17.63■□□□□ 0.41
NEK3-205ENST00000610828 TRIM35Q9UPQ4 493 aa17.63■□□□□ 0.41
NEK3-205ENST00000610828 ITSN1Q15811 1721 aa17.63■□□□□ 0.41
NEK3-205ENST00000610828 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.63■□□□□ 0.41
NEK3-205ENST00000610828 SLIT1O75093 1534 aa17.63■□□□□ 0.41
NEK3-205ENST00000610828 AEBP2Q6ZN18 517 aaPredicted RBP17.62■□□□□ 0.41
NEK3-205ENST00000610828 PTPRUQ92729 1446 aa17.62■□□□□ 0.41
NEK3-205ENST00000610828 RIPK4P57078 832 aa17.62■□□□□ 0.41
NEK3-205ENST00000610828 SKAP1Q86WV1 359 aa17.62■□□□□ 0.41
NEK3-205ENST00000610828 ARHGAP23Q9P227 1491 aa17.62■□□□□ 0.41
NEK3-205ENST00000610828 AKAP12Q02952 1782 aa17.62■□□□□ 0.41
NEK3-205ENST00000610828 FCHSD2O94868 740 aa17.61■□□□□ 0.41
NEK3-205ENST00000610828 THEMISQ8N1K5 641 aaPredicted RBP17.61■□□□□ 0.41
NEK3-205ENST00000610828 TSR2Q969E8 191 aaKnown RBP17.61■□□□□ 0.41
NEK3-205ENST00000610828 BCL2L13Q9BXK5 485 aa17.61■□□□□ 0.41
NEK3-205ENST00000610828 PANK1Q8TE04 598 aa17.61■□□□□ 0.41
NEK3-205ENST00000610828 AMOTL2Q9Y2J4 779 aa17.61■□□□□ 0.41
NEK3-205ENST00000610828 LRRC7Q96NW7 1537 aa17.6■□□□□ 0.41
NEK3-205ENST00000610828 MS4A1P11836 297 aa17.6■□□□□ 0.41
NEK3-205ENST00000610828 PRKAR2BP31323 418 aa17.6■□□□□ 0.41
NEK3-205ENST00000610828 NEFMP07197 916 aa17.59■□□□□ 0.41
NEK3-205ENST00000610828 RSPH6AQ9H0K4 717 aa17.59■□□□□ 0.41
NEK3-205ENST00000610828 COG6Q9Y2V7 657 aa17.59■□□□□ 0.41
NEK3-205ENST00000610828 AATKQ6ZMQ8 1374 aa17.59■□□□□ 0.41
NEK3-205ENST00000610828 HMOX1P09601 288 aa17.59■□□□□ 0.41
NEK3-205ENST00000610828 RRS1Q15050 365 aaKnown RBP17.59■□□□□ 0.41
NEK3-205ENST00000610828 TBX22Q9Y458 520 aa17.59■□□□□ 0.41
NEK3-205ENST00000610828 ACEP12821 1306 aa17.58■□□□□ 0.4
NEK3-205ENST00000610828 CDK12Q9NYV4 1490 aaPredicted RBP17.57■□□□□ 0.4
NEK3-205ENST00000610828 PDE4AP27815 886 aa17.57■□□□□ 0.4
NEK3-205ENST00000610828 IL13P35225 146 aa17.56■□□□□ 0.4
NEK3-205ENST00000610828 EXOSC9Q06265 439 aaKnown RBP17.56■□□□□ 0.4
NEK3-205ENST00000610828 IL16Q14005 1332 aa17.56■□□□□ 0.4
NEK3-205ENST00000610828 TOPAZ1Q8N9V7 1692 aa17.56■□□□□ 0.4
NEK3-205ENST00000610828 TTC21BQ7Z4L5 1316 aa17.55■□□□□ 0.4
NEK3-205ENST00000610828 PLEKHG3A1L390 1219 aa17.55■□□□□ 0.4
NEK3-205ENST00000610828 CT47B1P0C2W7 299 aaPredicted RBP17.55■□□□□ 0.4
NEK3-205ENST00000610828 ANP32AP39687 249 aaKnown RBP17.55■□□□□ 0.4
NEK3-205ENST00000610828 CLUAP1Q96AJ1 413 aa17.55■□□□□ 0.4
NEK3-205ENST00000610828 BACH2Q9BYV9 841 aa17.54■□□□□ 0.4
NEK3-205ENST00000610828 ERICH6Q7L0X2 663 aa17.54■□□□□ 0.4
NEK3-205ENST00000610828 PHACTR3Q96KR7 559 aa17.54■□□□□ 0.4
NEK3-205ENST00000610828 TNNQ9UQP3 1299 aa17.54■□□□□ 0.4
NEK3-205ENST00000610828 PTCH1Q13635 1447 aa17.54■□□□□ 0.4
NEK3-205ENST00000610828 RLBP1P12271 317 aa17.53■□□□□ 0.4
NEK3-205ENST00000610828 USP6P35125 1406 aa17.53■□□□□ 0.4
NEK3-205ENST00000610828 NRKQ7Z2Y5 1582 aa17.53■□□□□ 0.4
NEK3-205ENST00000610828 DIP2AQ14689 1571 aa17.52■□□□□ 0.4
NEK3-205ENST00000610828 NFE2L2Q16236 605 aa17.52■□□□□ 0.39
NEK3-205ENST00000610828 SMC4Q9NTJ3 1288 aa17.52■□□□□ 0.39
NEK3-205ENST00000610828 PMFBP1Q8TBY8 1022 aa17.51■□□□□ 0.39
NEK3-205ENST00000610828 IGHDP01880 384 aa17.51■□□□□ 0.39
NEK3-205ENST00000610828 CEP170BQ9Y4F5 1589 aaPredicted RBP17.5■□□□□ 0.39
NEK3-205ENST00000610828 ZKSCAN2Q63HK3 967 aa17.5■□□□□ 0.39
NEK3-205ENST00000610828 LAS1LQ9Y4W2 734 aaKnown RBP17.5■□□□□ 0.39
NEK3-205ENST00000610828 NPM2Q86SE8 214 aaKnown RBP17.49■□□□□ 0.39
NEK3-205ENST00000610828 FTSJ3Q8IY81 847 aaKnown RBP17.49■□□□□ 0.39
NEK3-205ENST00000610828 OVOS2A0A0J9YW53 1432 aa17.49■□□□□ 0.39
NEK3-205ENST00000610828 OVOS2Q6IE36 1432 aa17.49■□□□□ 0.39
NEK3-205ENST00000610828 RGS3P49796 1198 aa17.48■□□□□ 0.39
NEK3-205ENST00000610828 SSH1Q8WYL5 1049 aa17.48■□□□□ 0.39
NEK3-205ENST00000610828 RIMS1Q86UR5 1692 aaKnown RBP17.48■□□□□ 0.39
NEK3-205ENST00000610828 SOX12O15370 315 aa17.47■□□□□ 0.39
NEK3-205ENST00000610828 KCNA6P17658 529 aa17.47■□□□□ 0.39
NEK3-205ENST00000610828 NGDNQ8NEJ9 315 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms